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PUBLICATIONS DURING 2013 Singh, N.K.; Raichand, R.; Kaur, I.; Kaur, C.; Pareekh, S. and Shanmugam, Mayilraj
Description of a novel bacterium Exiguobacterium himgiriensis sp. nov., isolated from soil sample collected from the cold desert of The Indian Himalayas. Antonievan Leeuwenhoek, 103, 789-796, 2013.
Kumar, S.; Kaur, C.; Kimura, K.; Takeo, M.; Raghava, G.P.S. and Shanmugam Mayilraj
Draft genome sequence of type species of the genus Citrobacter, Citrobacter freundii MTCC 1658T. Genome Announc., 1:e00120, 2013.
Monu Bala; Kumar, S.; Raghava, G.P.S. and Shanmugam Mayilraj
(2013). Draft genome sequence of Rhodococcus qingshengii strain BKS 20-40. Genome Announc., 1:e00128, 2013.
Kumar, S. Monu Bala: Raghava, G.P.S. and Shanmugam Mayilraj
Draft genome sequence of Rhodococcus triatomae strain BKS 15-14. Genome Announc .,1:e00129, 2013.
Singh, N.K.; Kumar, S.; Raghava, G.P.S. and Shanmugam, Mayilraj
Draft genome sequence of Acinetobacter baumannii strain MSP4-16. Genome Announc.,1:e00137,2013.
Kaur, N.; Kumar, S.; Monu Bala, Raghava, G.P.S. and Shanmugam, Mayilraj Draft
genome sequence of Amycolatopsis decaplanina strain DSM44594T. Genome Announce., 1:e00138,2013.
Monu Bala; Kumar, S.; Raghava, G.P.S. and Shanmugam, Mayilraj
Draft genome sequence of Rhodococcus ruber strain BKS 20-38. Genome Announc., 1:e00139,2013.
Kumar,S.; Kaur, N.; Singh, N.K.; Raghava, G.P.S. and Shanmugam, Mayilraj Draft
genome sequence of Streptomyces gancidicus strain BKS 13-15. Genome Announc.,1:e00150, 2013.
Jain, Shweta and Chodisetti, Sathi Babu and Agrewala, J N (2013) Combinatorial Signaling through TLR-2 and CD86 Augments Activation and Differentiation of Resting B Cells. PloS one, 8 (1). e54392.
Qureshi, Abid and Thakur, Nishant and Kumar, Manoj (2013) HIPdb: A Database of Experimentally Validated HIV Inhibiting Peptides. PloS one, 8 (1). e54908.
Sharma, Priyanka and Tuteja, Satish K and Bhalla, Vijayender and Shekhawat, G and Dravid, Vinayak P and Suri, C Raman (2013) Bio-functionalized graphene-graphene oxide nanocomposite based electrochemical immunosensing. Biosensors & bioelectronics, 39 (1). pp. 99-105. Kumar R, Raghava GPHybrid Approach for Predicting Coreceptor Used by HIV-1 from Its V3 Loop Amino Acid Sequence. PLoS One. 15;8(4):e61437.
Baindara P, Mandal SM, Chawla N, Singh PK, Pinnaka AK, Korpole SCharacterization of two antimicrobial peptides produced by a halotolerant Bacillus subtilis strain SK.DU.4 isolated from a rhizosphere soil sample. AMB Express. 5;3(1):2.
Vikram S, Kumar S, Vaidya B, Pinnaka AK, Raghava GPDraft Genome Sequence of the 2-Chloro-4-Nitrophenol-Degrading Bacterium Arthrobacter sp. Strain SJCon. Genome Announc. 7;1(2):e0005813.
Singla D, Tewari R, Kumar A, Raghava GP; Open Source Drug Discovery Consortium Designing of inhibitors against drug tolerant Mycobacterium tuberculosis (H37Rv). Chem Cent J. 8;7(1):49.
Gautam A, Chaudhary K, Kumar R, Sharma A, Kapoor P, Tyagi A; Open source drug discovery consortium, Raghava GP(2013). In silico approaches for designing highly effective cell penetrating peptides. J Transl Med. Dhaunta N, Arora K, Chandrayan SK, Guptasarma PIntroduction of a thermophile-sourced ion pair network in the fourth beta/alpha unit of a psychophile-derived triosephosphate isomerase from Methanococcoides burtonii significantly increases its kinetic thermal stability. Biochim Biophys Acta. 14;1834(6):1023-1033.
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PUBLICATIONS DURING 2012
Aithal, A.; Sharma, A.; Joshi, S.; Raghava, G.P.S. and Varshney, G.C. PolysacDB: a database of microbial polysaccharide antigens and their antibodies. PLoS One., 7 :e34613, 2012 Sekhon, K. K.; Khanna, S. and Cameotra, S.S. Biosurfactant Production and Potential Correlation with Esterase Activity. J. Pet. Environ. Biotechnol. 3: 7, 2012
Khatri, N.; Khatri, I.; Subramanian, S. and Raychaudhuri. S. Ethanolamine utilization in Vibrio alginolyticus. Biol. Direct., 12;7:45, 2012. Srinivasan, V.B.; Vaidyanathan, V.; Mondal, A.; Venkataramaiah, M. and Rajamohan, G.
Functional characterization of a novel outer membrane porin kpno, regulated by PhoBR two-component system in klebsiella pneumoniae NTUH-K2044. PLoS One, 7, e41505, 2012 Singh, V.; Ekka, M.K. and Kumaran, S.
Second monomer binding is the rate-limiting step in the formation of the dimeric PhoP-DNA complex. Biochemistry, 51, 1346-1356, 2012.
Anand, S.; Singh, V.; Singh, A.K.; Mittal, M.; Datt M.; Subramani, B. and Kumaran, S.
Equilibrium binding and kinetic characterization of putative tetracycline repressor family transcription regulator Fad35R from Mycobacterium tuberculosis. FEBS J. 279, 3214-3228, 2012.
Mahajan, S.; Dkhar, H.K.; Chandra, V.; Dave, S.; Nanduri, R.; Janmeja, A.K. and Agrewala, J.N. Gupta P. Mycobacterium tuberculosis modulates macrophage lipid-sensing nuclear receptors PPARγ and TR4 for survival. J Immunol. 188, 5593-5603, 2012. Singh, P.K.; Chittpurna; Ashish; Sharma, V.; Patil, P.B. and Korpole, S. Identification, Purification and Characterization of Laterosporulin, a Novel Bacteriocin Produced by Brevibacillus sp. Strain GI-9. PLoS One, 7, e31498, 2012.
Sharma, V.; Singh, P.K.; Midha, S.; Ranjan, M.; Korpole, S. and Patil, P.B.
Genome sequence of Brevibacillus laterosporus Strain GI-9. J. Bacteriol. 194, 1279, 2012.
Midha, S.; Sharma, V.; Ranjan, M.; Pinnaka, A.K. and Patil, P.B.
Genome sequence of Xanthomonas axonopodis pv. punicae Strain LMG 859. J. Bacteriol. 194:2395, 2012.
Midha, S.; Sharma, V.; Ranjan, M.; Pinnaka, A.K. and Patil, P.B.
Genome sequence of Xanthomonas citri pv. mangiferaeindicae Strain LMG 941. J. Bacteriol. 194: 3031, 2012.
Midha, S.; Ranjan, M.; Sharma, V.; Kumari, A.; Singh, P.K.; Korpole, S. and Patil, P.B. Genome Sequence of Pediococcus pentosaceus Strain IE-3. J. Bacteriol. 194:4468, 2012.
Gupta, S.; Goyal, R.; Nirwan, J.; Cameotra, S.S. and Tejoprakash, N.
Biosequestration, transformation, and volatilization of mercury by Lysinibacillus fusiformis isolated from industrial effluent. J. Microbiol. Biotechnol. 22, 684-689, 2012.
Pemmaraju, S.C; Sharma, D; Singh, N; Panwar, R.; Cameotra,S.S.and Pruthi, S.
Production of Microbial Surfactants from Oily Sludge-Contaminated Soil by Bacillus subtilis DSVP23. Appl. Biochem. Biotechnol. 167, 1119-1131, 2012.
Roy Choudhury, A.Sharma, N. and Prasad, G.S.
Deoiled jatropha seed cake is a useful nutrient for pullulan production. Microbial Cell Factories. 11:39, 2012. Aithal, A.; Sharma, A.; Joshi, S.; Raghava, G.P.S. and Varshney, G.C.
PolysacDB: a database of microbial polysaccharide antigens and their antibodies. PLoS One., 7 :e34613, 2012 Kumar,S.; Vikram,S. and Raghava, G.P.S.
Genome Sequence of the Nitroaromatic Compound-Degrading Bacterium Burkholderia sp. Strain SJ98. J. Bacteriol., 194 , 12: 3286, 2012. Kumar, S.; Sheokand, N.; Mhadeshwar, M.A.; Raje, C.I. and Raje, M.
Characterization of glyceraldehyde-3-phosphate dehydrogenase as a novel transferrin receptor. Int. J. Biochem. Cell. Biol., 44, 189-199, 2012.
Panwar, B. and Raghava, G.P.S.
Predicting sub-cellular localization of tRNA synthetases from their primary structures. Amino Acids., 42, 1703-1713, 2012
Manickam, N.; Pareek, S.; Kaur, I.; Singh, N.K. and Mayilraj, S.
Nitratireductor lucknowense sp. nov., a novel bacterium isolated from a pesticide contaminated soil. Antonie van Leeuwenhoek, 101, 125-131, 2012
Bala, M.; Kaur, C.; Kaur, I.; Khan, F. and Mayilraj, S.
Kocuria sediminis sp. nov., isolated from a marine sediment sample. Antonie van Leeuwenhoek. 101, 469-478, 2012.
Gursonika Binepal; Rajiv Kumar Ranjan and Kammara Rajagopal
Expression of synthetic human tumor necrosis factor is toxic to Escherichia coli. Gene., 493, 155-160, 2012
Kumar, A.; Cameotra, S.S. and Gupta, S.
Screening and characterization of potential cadmium biosorbent Alcaligenes strain from industrial effluent. J. Basic Microbiol., 52, 160-166, 2012.
Arora, P.K. and Jain, R.K.
Biotransformation of 4-chloro-2-nitrophenol into 5-chloro-2-methylbenzoxazole by a marine Bacillus sp. strain MW-1. Biodegradation. 23, 325-331, 2012.
Gupta, S.; Goyal, R.; Nirwan, J.; Cameotra, S.S. and Nagaraja, T.
Biosequestration, Transformation, and Volatilization of Mercury by Lysinibacillus fusiformis Isolated from Industrial Effluent. J. Microbiol. Biotechnol. 22, 684-689, 2012.
Chodisetti, S.B.; Rai, P.K.; Gowthaman, U.; Pahari, S. and Agrewala, J.N.
Potential T cell epitopes of Mycobacterium tuberculosis that can instigate molecular mimicry against host: implications in autoimmune pathogenesis. BMC Immunol., 13 (1):13, 2012.
Singh, S.; Ashish and Dikshit, K. L.
Pro(42) and Val(45) of staphylokinase modulate intermolecular interactions of His(43)-Tyr(44) pair and specificity of staphylokinase-plasmin activator complex. FEBS Lett. , 586, 653-658, 2012.
Singh H., Chauhan, J.S., Gromiha, M. M., Consortium, OSDD Raghava, G. P. S., ccPDB: compilation and creation of data sets from Protein Data Bank. Nucleic Acids Res, 40, D486-489, 2012.
Kumar, S.; Sheokand, N.; Mhadeshwar, M.A.; Raje, C.I. and Raje, M.
Characterization of glyceraldehyde-3-phosphate dehydrogenase as a novel transferrin receptor. Int. J. Biochem. Cell. Biol. 44, 189-199, 2012
Gursonika Binepal; Rajiv Kumar Ranjan and Kammara Rajagopal
Expression of synthetic human tumor necrosis factor is toxic to Escherichia coli. Gene. 493, 155-160, 2012
Bala, M.; Kaur, C.; Kaur, I.; Khan, F. and Mayilraj, S.
Kocuria sediminis sp. nov., isolated from a marine sediment sample. Antonie van Leeuwenhoek . 101, 469-478, 2012.
Manickam, N.; Pareek, S.; Kaur, I.; Singh, N.K.and Mayilraj, S.
Nitratireductor lucknowense sp. nov., a novel bacterium isolated from a pesticide contaminated soil. Antonie van Leeuwenhoek. 101, 125-131, 2012.
Gosal, S. K.; Saroa, G.S.; Vikal, Y.; Cameotra, S.S.; Pathania, N. and Bhanot, A.
Isolation and molecular characterisation of diazotrophic growth-promoting bacteria from wheat rhizospheric soils of Punjab. Soil Research, 49: 725 - 732, 2012
Dave,S.; Kaur, N.J.; Nanduri, R.; Dkhar, H.K.; Kumar, A. and Gupta, P.
Inhibition of Adipogenesis and Induction of Apoptosis and Lipolysis by Stem Bromelain in 3T3-L1 Adipocytes. PLoS one, 7, e30831, 2012.
Ghosh, S.; Patil, S.; Ahire, M.; Kitture, R.; Kale, S.; Pardesi, K.; Cameotra, S.S.; Bellare, J.; Dhavale, D.D.; Jabgunde, A. and Chopade, B.A.
Synthesis of silver nanoparticles using Dioscorea bulbifera tuber extract and evaluation of its synergistic potential in combination with antimicrobial agents. Int. J. Nanomedicine. 7 483 – 496, 2012.
Joshi, K.K.; Nanda, J.S.; Kumar, P. and Sahni, G.
Substrate kringle-mediated catalysis by the streptokinase-plasmin activator complex: Critical contribution of kringle-4 revealed by the mutagenesis approaches. Biochim Biophys Acta., 1824, 326-333, 2012. |
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PUBLICATIONS DURING 2011
Agarwal S, Mishra NK, Singh H, Raghava GP.(2011).Development of an HPLC method for determination of pentachloronitrobenzene, hexachlorobenzene and their possible metabolites. PLoS One. 2011;6(9).
Frese, S.A.; Benson, A.K.; Tannock, G.W.; Loach, D.M.; Kim, J.; Zhang, M.; Oh, P.L.; Heng, N.C.K.; Patil, P.B.; Juge, N.; MacKenzie, D.A.; Pearson, B.M.; Lapidus, A.; Dalin, E.; Tice, H.; Goltsman, E.; Land, M.; Hauser, L.; Ivanova, N.; Kyrpides, N.C. and Walter, J.
The evolution of host specialization in the vertebrate gut symbiont lactobacillus reuteri. PLoS Genet, 7: e1001314, 2011.
Potnis, N.; Krasileva, K.; Chow, V.; Almeida, N.F.;Patil, P.B.; Ryan, R.P.; Sharlach, M.; Behlau, F.; Dow, J.M.; Momol, T.; White, F.F.; Preston, J.F.; Vinatzer, B.A.; Koebnik, R.; Setubal, J.C.; Norman, D.J.; Staskawicz, B. and Jones, J.B.
Comparative Genomics Reveals Diversity among Xanthomonads Infecting Tomato and Pepper. BMC Genomics, 12:146, 2011.
Bogdanove, A. J.; Koebnik, R.; Lu, H.;Furutani, A.; Angiuoli, S. V.; Patil, P. B.; Van Sluys, M. A.; Ryan, R. P.; Meyer, D. F.; Han, S. W. et al.
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. J. Bacteriol., 193, 5450 -5464, 2011.
Siddiqui, K.F.; Amir, M. and Agrewala, J.N.
Understanding the biology of 16 kDa antigen of Mycobacterium tuberculosis: scope in diagnosis, vaccine design and therapy. Critical Reviews in Microbiology, 37, 349-357, 2011.
Gowthaman, U.; Singh, V.; Zeng, W.; Jain, S.;, Siddiqui, K.F.; Gurram, R.; Sathibabu, C.; Parihar, P.; Gupta, P.; Gupta, U.D.; Jackson, D.C. and Agrewala, J.N.
Promiscuous peptide of 16 kDa antigen linked to Pam2Cys protects against M. tuberculosis by evoking enduring memory T cells response. J. Infect. Dis., 204, 1328-1338, 2011
Boro, R.; Kaushal, J.; Nangiar, Y.; Wangoo, N. and Suri, C.R.
Gold nanoparticles catalyzed chemiluminescence immunoassay for detection of herbicide 2,4-dichlorophenoxyacetic acid. Analyst, 136, 2125-2130, 2011.
Dahiya, M.; Singh, S.; Rajamohan, G.; Sethi, D.; Ashish and Dikshit, K.L.
Intermolecular interactions in staphylokinase-plasmin(ogen) bimolecular complex: Function of His43 and Tyr44. FEBS Lett., 585, 1814-1820, 2011.
Chakraborti, P.K.; Matange, N.; Nandicoori, V.K.; Singh, Y.; Tyagi, J.S. and Visweswariah, S.S.
Signalling mechanisms in Mycobacteria. Tuberculosis, 91, 432-440, 2011.
Kanudia, P.; Mittal, M.; Kumaran, S. and Chakraborti, P.K.
Amino-terminal extension present in the Methionine aminopeptidase type 1c of Mycobacterium tuberculosis is indispensible for its activity. BMC Biochemistry, 5:12:35, 2011.
Singh, M.; Kumar, P. and Karthikeyan, S.
Structural basis for pH dependent monomer-dimer transition of 3,4-dihydroxy 2-butanone-4-phosphate synthase domain from M. tuberculosis. J. Structural Biology, 174, 374-384, 2011.
Dongre, M.; Khatri, N. Dureja, C. and Raychaudhuri, S.
Alanine-scanning mutagenesis of selected residues in the N-terminal region alters the functionality of LuxO: lessons from a natural variant LuxOPL91. J. Med. Microbiol., 60,856-860, 2011.
Dar, H.H.; Prasad, D.; Varshney, G.C. and Chakraborti, P.K.
Secretory Nucleoside Diphosphate Kinase from both the Intra- and Extra- cellular Pathogenic Bacteria are functionally indistinguishable. Microbiology, 157, 3024-3035, 2011.
Noolvi, M. N.; Patel, H.M.; Singh, N.; Gadad, A.K. and Cameotra, S.S.
Synthesis and Anticancer Evaluation of Novel 2-Cyclopropylimidazo[2,1-b][1,3,4]-thiadiazole Derivatives. European Journal of Medicinal Chemistry, 46, 4411-4418, 2011.
Dave,S.; Kaur, N.J.; Nanduri, R.; Dkhar, H.K.; Kumar, A. and Gupta, P.
Inhibition of Adipogenesis and Induction of Apoptosis and Lipolysis by Stem Bromelain in 3T3-L1 Adipocytes. PLoS one, 7 e30831, 2012.
Mayilraj, S.; Ruckmani, A.; Kaur, C.; Kaur, I. and Peter-Klenk, H.
Cohnella ferri sp. nov. a novel member of the genus Cohnella isolated from haematite ore. Current Microbiol., 62, 1704-1709, 2011.
Chittpurna; Kumar, P.K.; Verma, D.; Mayilraj, S. and Korpole, S.
Micrococcus lactis sp. nov., isolated from a dairy industry waste treatment. Int. J. Syst. Evol. Microbiol., 61, 2832-2836, 2011.
Ruckmani, A.; Kaur, I.; Schuman, P.; Klenk, H.P. and Mayilraj, S.
Calidifontibacter indicus gen. nov., sp. nov., a novel actinobacterium belonging to family Dermacoccaceae isolated from Western Ghats region, India and emendation of the family Dermacoccaceae. Int. J. Syst. Evol. Microbiol., 61, 2419-2424, 2011.
Raichand, R.; Kaur, I.; Singh, N.K. and Mayilraj, S. Pontibacter rhizosphera sp. nov., isolated from rhizosphere soil of an Indian medicinal plant Nerium indicum. Antonie van Leeuwenhoek. 100, 29-35, 2011. S. K. Gosal, G. S. Saroa, Y. Vikal, S. S. Cameotra, Neemisha Pathania and A. Bhanot. Isolation and molecular characterization of diazotrophic growth-promoting bacteria from wheat rhizospheric soils of Punjab. Soil Research, 2011 Phosphorylation of PhoP Protein Plays Direct Regulatory Role in Lipid Biosynthesis of Mycobacterium tuberculosis. J Biol Chem., 286, 45197-45208, 2011. Selenite Stress Elicits Physiological Adaptations in Bacillus sp. (Strain JS-2)2011. J. Microbiol. Biotechnol., 21, 1184–1192, 2011.
Trifluoroethanol Stabilizes the Molten Globule State and Induces Non-Amyloidic Turbidity in Stem Bromelain near its Isoelectric Point. Int. J. Biol. Macromol., 49, 536-542, 2011.
Fungus-mediated biological synthesis of gold nanoparticles: potential in detection of liver cancer. Int. J. Nanomedicine, 6, 2305-2319, 2011.
Selenite Stress Elicits Physiological Adaptations in Bacillus sp. (Strain JS-2)2011. J. Microbiol. Biotechnol., 21, 1184–1192, 2011.
A novel role for bruton’s tyrosine kinase in hepatocyte growth factor mediated immunoregulation of dendritic cells. J. Biol. Chem., 286, 32054-32063, 2011.
Singhal, Eshu and Sen, Pradip
Hepatocyte growth factor-induced c-Src-phosphatidylinositol 3-kinase-AKT-mammalian target of rapamycin pathway inhibits dendritic cell activation by blocking IkB kinase activity. Int. J. Biochem. Cell. Biol., 43, 1134-1146, 2011.
Arora, P.K. and Jain, R.K.
Pathway for Degradation of 2-Chloro-4-Nitrophenol in Arthrobacter sp. SJCon. Curr. Microbiol., 63, 568-573, 2011.
Identification of Mannose Interacting Residues using Local Composition. Plos ONE, 6: e24039, 2011.
Designing of Highly Effective Complementary and Mismatch siRNAs for Silencing a Gene. Plos ONE, 6: e23443, 2011.
Analysis and prediction of cancerlectins using evolutionary and domain information. BMC Research Notes, 4:237, 2011.
A Web Server for Predicting Inhibitors against Bacterial Target GlmU Protein. BMC Pharmacology, 11: 5, 2011.
Pandey, J.; Heipieper, H.J.; Chauhan, A.; Arora, P.K.; Prakash, D.; Takeo, M.; and jain, R.K.
Reductive dehalogenation mediated initiation of aerobic degradation of 2-chloro-4-nitrophenol (2C4NP) by Burkholderia sp. strain SJ98. Appl. Microbiol. Biotechnol., 92, 597-607, 2011.
Description of Chryseomicrobium imtechense gen. nov., sp. nov., a new member of the family Planococcaceae. Int. J. Syst. Evol. Microbiol., 61, 1859-1864, 2011.
Monoclonal Antibodies Recognizing the Non-Tandem Repeat Regions of the Human Mucin MUC4 in Pancreatic Cancer. PLoS ONE, 6: e23344, 2011.
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. Journal of Bacteriology 193, 5450 -5464, 2011.
Trifluoroethanol Stabilizes the Molten Globule State and Induces Non-Amyloidic Turbidity in Stem Bromelain near its Isoelectric Point. Int. J. Biol. Macromol., 49, 536-542, 2011.
Visual insight into how low pH alone can induce actin severing ability in gelsolin under calcium free conditions. J. Biol. Chem., 286, 20387-20397, 2011.
Dongre, M.; Singh, N.S.; Dureja, C.; Pedda, N.; Solanki, A.K.; Ashish, A.and Raychaudhuri, S.
Evidence on how a conserved glycine in the hinge region of HapR regulates its
DNA binding ability: lessons from a natural variant. J. Biol. Chem., 286, 15043-15049, 2011.
Dahiya, M.; Singh, S.; Rajamohan, G.; Sethi, D.; Ashish and Dikshit, K.L.
Intermolecular interactions in staphylokinase-plasmin(ogen) bimolecular complex: Function of His43 and Tyr44. FEBS Lett., 585, 1814-1820, 2011.
Sekhon, K.K.; Khanna, S. and Cameotra, S.S.
Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. Microbial. Cell. Factories,10, 49, 2011.
Mishra N.K. and Raghava, G.P.S.
Prediction of Specificity and Cross-Reactivity of Kinase Inhibitors. Letters in Drug Design & Discovery, 223-228, 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Dongre, M.; Singh, N.S.; Dureja, C.; Pedda, N.; Solanki, A.K.; Ashish, A.and Raychaudhuri, S.
Evidence on how a conserved glycine in the hinge region of HapR regulates its
DNA binding ability: lessons from a natural variant. J. Biol. Chem., 286, 15043-15049, 2011.
Dahiya, M.; Singh, S.; Rajamohan, G.; Sethi, D.; Ashish and Dikshit, K.L.
Intermolecular interactions in staphylokinase-plasmin(ogen) bimolecular complex: Function of His43 and Tyr44. FEBS Lett., 585, 1814-1820, 2011.
Sekhon, K.K.; Khanna, S. and Cameotra, S.S.
Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. Microbial. Cell. Factories,10, 49, 2011.
Mishra N.K. and Raghava, G.P.S.
Prediction of Specificity and Cross-Reactivity of Kinase Inhibitors. Letters in Drug Design & Discovery, 223-228, 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Dahiya, M.; Singh, S.; Rajamohan, G.; Sethi, D.; Ashish and Dikshit, K.L.
Intermolecular interactions in staphylokinase-plasmin(ogen) bimolecular complex: Function of His43 and Tyr44. FEBS Lett., 585, 1814-1820, 2011.
Sekhon, K.K.; Khanna, S. and Cameotra, S.S.
Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. Microbial. Cell. Factories,10, 49, 2011.
Mishra N.K. and Raghava, G.P.S.
Prediction of Specificity and Cross-Reactivity of Kinase Inhibitors. Letters in Drug Design & Discovery, 223-228, 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Sekhon, K.K.; Khanna, S. and Cameotra, S.S.
Enhanced biosurfactant production through cloning of three genes and role of esterase in biosurfactant release. Microbial. Cell. Factories,10, 49, 2011.
Mishra N.K. and Raghava, G.P.S.
Prediction of Specificity and Cross-Reactivity of Kinase Inhibitors. Letters in Drug Design & Discovery, 223-228, 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Mishra N.K. and Raghava, G.P.S.
Prediction of Specificity and Cross-Reactivity of Kinase Inhibitors. Letters in Drug Design & Discovery, 223-228, 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Jain, S.; Chodisetti, S.B. and Agrewala J.N.
CD40 signaling synergizes with TLR-2 in the BCR independent activation of resting B cell. PLoS ONE, 6: e20651, 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Dhanjal, S.; Kaur, I.; Korpole, S.; Schuman, P.;Cameotra, S.S.; Pukall, R.; Klenk, H-P. and Mayilraj, S.
Agrococcus carbonis sp. nov., a novel species of the genus Agrococcus isolated from coal mine soil sample. Int. J. Syst. Evol. Microbiol., 61:1253-1258, 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Srinivasan, VB, Rajamohan G, Pancholi P, Marcon M, Gebreyes WA.
Molecular cloning and functional characterization of two novel membrane fusion proteins in conferring antimicrobial resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 66, 499-504, 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Pinnanka, A.K.; Srinivas, T. N. R., Prasad, A. R. and Shivaji, S. (2011) Identification of Fruity Aroma-Producing Compounds from Chryseobacterium sp. isolated from the Western Ghats, India. Online First™, 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Bhawsar, S.D; Chopade, B.M. and Cameotra, S.S.
Degradation of Diesel by Acinetobacter genospeciesIsolated From Rhizosphere of Wheat. Journal of advances in developmental research. Online 2011.
Identification through combinatorial random and rational mutagenesis of a substrate-interacting exosite in the gamma domain of streptokinase. J. Biol. Chem., 286, 6458-6469, 2011.
Role of Swi6/HP1 self-association- mediated recruitment of Clr4/Suv39 in establishment and maintenance of heterochromatin in fission yeast. J. Biol. Chem., 286, 9308-9320, 2011.
CCDB: a curated database of genes involved in cervix cancer. Nucleic Acids Res., 39: D975-979, 2011.
Kathania, M.; Raje, C. I.; Raje, M.; Dutta, R.K.; Majumdar, S.;
Bfl-1/A1 acts as a negative regulator of autophagy in mycobacteria infected macrophages. Int. J. Biochem. Cell. Biol., 43, 573-585, 2011.
SVM based prediction of RNA-binding proteins using binding residues and evolutionary information. J. Mol. Recognit., 24, 303-313, 2011.
Biotransformation and biomonitoring of phenylurea herbicide diuron. Bioresource Technol., 102, 3119-3125, 2011.
Cys-Gly Specific Di-peptidase Dug1p From S. cerevisiae Binds Promiscuously To Di, Tri, and Tetra Peptides: Peptide-Protein Interaction, Homology Modeling, and Activity Studies Reveal A Latent Promiscuity in Substrate Recognition. Biochimie, 93, 175-186, 2011.
Yaniella fodinae sp. nov., a novel member of the genus Yaniella isolated from
coal mine sample. Int. J. Syst. Evol. Microbiol., 61, 535-539, 2011.
Kaur,I.; Dhanjal, S.; Korpole, S.; Bora, T.C. and Mayilraj, S.
Description of a novel actinobacterium Microbacterium assamensis sp. nov., isolated from water sample collected from the river Brahmaputra, Assam, India. Curr. Microbiol., 62, 1039-1043, 2011.
Lactose enhanced cellulase production by Microbacterium sp. Isolated from fecal matter of Zebra (Equuf zebra). Curr. Microbiol., 62, 1050-1055, 2011.
Description of a novel actinobacterium Kocuria assamensis sp. nov., isolated
from water sample collected from the river Brahmaputra, Assam, India. Antonie van Leeuwenhoe., 99, 721-726, 2011.
Design of single peptides for self-assembled conduction channels. Nanotechnol., 22:215606, 2011.
The evolution of host specialization in the vertebrate gut symbiont lactobacillus reuteri. PLoS Genet, 7: e1001314, 2011.
Comparative Genomics Reveals Diversity among Xanthomonads Infecting Tomato and Pepper. BMC Genomics, 12:146, 2011
Coadministration of IL-1+IL-6+TNF-α with Mycobacterium tuberculosis infected macrophages vaccine induces better protective T cell memory than BCG. PLoS ONE, 6:e16097, 2011.
Makkar,R.S.; Cameotra, S.S. and Banat, I.M.
Advances in utilization of renewable substrates for biosurfactant production. AMB Express, 1: 5, 2011.
Pullulan production by an osmotolerant Aureobasidium pullulans RBF-4A3 isolated from flowers of Caesulia axillaris. Carbohydrate Polymers, 83,1547-1552, 2011.
Crystal structure analysis of icosahedral lumazine synthase from Salmonella typhimurium, an antibacterial drug target. Acta. Cryst., D67, 131–139, 2011
Environmental Applications of Biosurfactants: Recent Advances. Int. J. Mol. Sci., 12, 633-654, 2011
N-Terminal sequencing by mass spectrometry through specific fluorescamine labeling of α-amino groups before tryptic digestion. Anal. Biochem., 408, 263-268, 2011. Goyal R, Das AK, Singh R, Singh PK, Korpole S and Sarkar D.
Dhanjal, S. and Cameotra, S.S.
Dave, S.; Mahajan, S.; Chandra, V. and Gupta, P.
Chauhan, A.;Zubair, S.; Tufail, S.; Sherwani, A.; Sajid, M.; Suri, C. R.; Azam, A. and Owais, M.
Dhanjal, S. and Cameotra, S.S. Singhal, E.; Kumar, P. and Sen, P.
Bhat, A.; Mondal, H.; Chauhan, J.; Raghava, G.P.S.; Methi, A. and Rao, A. ProGlycProt: a repository of experimentally characterized prokaryotic glycoproteins. Nucleic Acid Res. Online : http://nar.oxfordjournals.org/cgi/reprint/gkr911?
Tyagi, A.; Ahmed, F.; Thakur, N.; Sharma, A.; Raghava, G. P. S. and Kumar, M. HIVsirDB: A database of HIV inhibiting siRNAs. PLoS ONE, 6: e25917, 2011. Agarwal, S.; Mishra, N.K.; Singh, H. and Raghava, G. P. S.
Ahmed, F. and Raghava, G. P. S.
Kumar, R.; Panwar, B.; Chauhan, J.S. and Raghava, G. P. S.
Singla, D.; Anurag, M.; Dash, D. and Raghava, G. P. S.
Arora, P.K.; Chauhan, A.; Pant, B.; Korpole, S.; Mayilraj, S. and Jain, R.K.;
Jain, M.; Venkatraman, G.; Moniaux, N.; Kaur, S.; Kumar, S.; Chakraborty, S.; Varshney, G.C. and Batra, S.K.
Bogdanove, A. J.; Koebnik, R.; Lu, H.;Furutani, A.; Angiuoli, S. V.; Patil, P. B.; Van Sluys, M. A.; Ryan, R. P.; Meyer, D. F.; Han, S. W. et al.
Dave, S.; Mahajan, S.; Chandra, V. and Gupta, P.
Garg, R.; Peddada, N.; Sagar, A.; Nihalani, D. and Ashish
Ishwinder Kaur., Das, A. P., Acharya, M., Klenk, H- P., Sree, A. and Mayilraj, S*.
Planococcus plakortidis sp. nov., isolated from marine sponge Plakortis simplex (Schulze) collected in the Bay of Bengal. Int J Syst Evol Microbiol:IJS/2010/029967
Natesan Manickam., Siddhika Pareek., Ishwinder Kaur., Nitin Kumar Singh and Shanmugam Mayilraj*
Nitratireductor lucknowense sp. nov., a novel bacterium isolated from a pesticide contaminated soil. Antonie van Leeuwenhoek;ANTO-S-11-00039
Yadav, S.; Aneja, R.; Kumar, P.; Datt, M.; Sinha, S. and Sahni, G.
Jagmohan Singh
Agarwal, S.M.; Raghav, D.; Singh, H. and Raghava G.P.S.
Kumar, M.; Gromiha, M.M. and Raghava, G.P.S..
Sharma, P. and Suri, C.R.
Kaur, H.; Datt, M.; Krishna, M. E.; Mittal, M.; Singh, A.K. and Kumaran, S.
Dhanjal,S.; Ruckmani,A.; Cameotra,S.S.; Pukall,R.; Klenk,H-P and Mayilraj, S.
Sadhu, S.; Saha, P.; Mayilraj, S. and Maiti, T.K.
Kaur, C.; Kaur, I.; Raichand,R.; Bora, T.C. and Mayilraj, S.
Yew1, S.Y.; Shekhawa, G.; Wangoo, N.; Mhaisalkar, S.; Suri, C.R.; Dravid V.P.and Lam1, Y.M.
Frese, S.A.; Benson, A.K.; Tannock, G.W.; Loach, D.M.; Kim, J.; Zhang, M.; Oh, P.L.; Heng, N.C.K.; Patil, P.B.; Juge, N.; MacKenzie, D.A.; Pearson, B.M.; Lapidus, A.; Dalin, E.; Tice, H.; Goltsman, E.; Land, M.; Hauser, L.; Ivanova, N.; Kyrpides, N.C. and Walter, J.
Potnis, N.; Krasileva, K.; Chow, V.; Almeida, N.F.;Patil, P.B.; Ryan, R.P.; Sharlach, M.; Behlau, F.; Dow, J.M.; Momol, T.; White, F.F.; Preston, J.F.; Vinatzer, B.A.; Koebnik, R.; Setubal, J.C.; Norman, D.J.; Staskawicz, B. and Jones, J.B.
Singh, V.; Jain, S.; Gowthaman, U.; Parihar, P.; Gupta, P.; Gupta, U.D. and Agrewala, J.N.
Choudhury, A.R.; Saluja, P. and Prasad, G.S.
Kumar, P.; Singh, M. and Karthikeyan, S.
Magdalena Płociniczak, P.; Płaza, G.A.; Piotrowska-Seget, Z. and Cameotra, S.S.
Dhaunta, N.; Fatima, U. and Guptasarma, P.
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PUBLICATIONS DURING 2010
Sharma,P.; Gandhi, S.; Chopra, A. and Suri, C.R.
Fluoroimmunoassay based on suppression of fluorescence self-quenching for ultra sensitive detection of herbicide diuron. Anal. Chim. Acta., 676, 87-92, 2010 Kumar, N.; Venugopalan, P. and Kishore, R.
Crystallographically observed folded topology of an unsubstituted gamma-aminobutyric acid incorporated in a model peptide: importance of a C—H….O interaction. Biopolymers, 93, 927-931, 2010. Kumar, N. and Kishore, R.
Determination of an unusual secondary structural element in the immunostimulating tetrapeptide rigin in aqueous environments: insights via MD simulations, (1)H NMR and CD spectroscopic studies. J. Pept. Sci., 16, 456-464, 2010. Pashov, A.D.; Monzavi-Karbassi, B. ;Raghava, G.P.S.; and Kieber-Emmons, T.
Bridging Innate and Adaptive Anti-Tumor Immunity Targeting Glycans. J. Biomed. Biotechnol., 354068, 2010. Kukreti, H.; Mittal, V.; Chaudhary, A.; Rautela, R.S.; Kumar, M.; Chauhan, S.; Bhat, S.; Chhabra, M.; Bhattacharya, D.; Pasha, S.T.; Kumar, D.; Gomber, S.; Lal, S. and Rai, A. Continued persistence of a single genotype of dengue virus type-3 (DENV-3) in Delhi, India since its re-emergence over the last decade. J. Microbiol. Immunol. Infect., 43, 53-61, 2010.
Rajamohan, G.; Srinivasan, V.B. and Gebreyes, W.A.
Molecular and functional characterization of a novel efflux pump AmvA, in mediating antimicrobial and disinfectant resistance in Acinetobacter baumannii. J. Antimicrob. Chemother., 65, 1919-1925, 2010.
Rajamohan, G.; Srinivasan, V.B. and Gebreyes, W.A.
Novel role of Acinetobacter baumannii RND efflux transporters in mediating decreased susceptibility to biocides. J. Antimicrob. Chemother., 65, 228-232., 2010.
Daniel, H.M. and Prasad, G.S.
The role of culture collections as an interface between provides and users: the examples of yeasts. Resarch in Microbial., 161, 488-496, 2010.
Pinnanka, A.K.; Srinivas, T. N. R.; Pavankumar, P.; Madhu, S. and Shivaji, S. Nitritalea halalkaliphila gen. nov., sp. nov., an alkaliphilic bacterium of the family ‘Cyclobacteriaceae’, phylum Bacteroidetes. Int. J. Sys. Evol. Microbiol., 60, 2320–2325, 2010.
Pinnanka, A.K.; Srinivas, T. N. R.; Madhu, S.; Manorama, R. and Shivaji, S. Indibacter alkaliphilus gen. nov., sp. nov., an alkaliphilic bacterium isolated from a haloalkaline lake. Int. J. Sys. Evol. Microbiol., 60, 721-726, 2010. Kumar, P.; Singh, M.; Gautam, R. and Karthikeyan, S.
Potential anti-bacterial drug target: Structural characterization of 3,4-dihydroxy-2-butanone-4-phosphate synthase from Salmonella typhimurium LT2. Protein. , 78, 3292-3303, 2010.
Daniel, H.M. and Prasad, G.S.
The role of culture collections as interface between providers and users: the example of yeasts. Research in Microbiology 161, 488-496, 2010.
Pathak, A.; Goyal, R.; Sinha, A. and Sarkar, D.
Domain structure of virulence-associated response regulator phop of Mycobacterium tuberculosis: role of the linker region on regulator-promoter interaction(S). J. Biol. Chem. 285, 34309-34318, 1010.
Dar, H.H. and Chakraborti, P.K.
Intermolecular phosphotransfer is crucial for efficient catalytic activity of Nucleoside diphosphate kinase. Biochem. J., 430, 539-549, 2010. Ansari, H.R. and Raghava, G.P.
Identification of conformational B-cell Epitopes in an antigen from its primary sequence. Immunome Res., 6:6, 2010 Panwar, B. and Raghava, G.P.
Prediction and classification of aminoacyl tRNA synthetases using PROSITE domains. BMC Genomics., 11:507, 2010.
Fatima, U.; Sharma, S. and Guptasarma, P.
Structures of Differently Aggregated and Precipitated forms of gammaB Crystallin: An FTIR Spectroscopic and EM Study. Protein Pept. Lett., 17, 1155-1162, 2010.
Sharma, P.; Chopra, A.; Cameotra, S.S. and Suri, C.R.
Efficient biotransformation of herbicide diuron by bacterial strain Micrococcus sp.PS-1. Biodegradation., 21, 979-987, 2010.
Ranjan, R.K. and Kammara, Rajagopal
Efficient ligation and cloning of DNA fragments with two base pair Overhangs. Anal. Biochem. 402, 91-92, 2010.
Biswas, D.; Datt, M.; Ganesan, K.; and Mondal, A.K.
Cloning and characterization of thermotolerant xylitol dehydrogenases from yeast Pichia angusta. App. Microbiol. Biotechnol., 88, 1311-1120, 2010.
Ruckmani, A. and Chakrabarti, T.
Analysis of Bacterial Community Composition of a Spring Water from the Western Ghats, India Using Culture Dependent and Molecular Approaches. Curr. Microbiol., 62, 7-15, 2010.
Krishnamurthi, S.; Ruckmani, A.; Pukall, R. and Chakrabarti, T.
Psychrobacillus gen. nov.andproposalforreclassificationof Bacillus insolitus Larkin &Stokes,1967, B. psychrotolerans Abd-El Rahmanetal.,2002and B. psychrodurans Abd-El Rahmanetal.,2002as Psychrobacillus insolitus comb. nov., Psychrobacillus psychrotolerans comb. nov.and Psychrobacillus psychrodurans comb. nov., Syst. Appl. Microbiol., 33, 367-373, 2010.
Bajaj, A.; Pathak, A.; Mudiam, M.; Mayilraj, S. and Manickam, N.
Isolation and characterization of a Pseudomonas sp. strain IITR01 capable of degrading α-endosulfan and endosulfan sulfate. J. App. Microbiol., 109, 2135-2143, 2010.
Manickam, N.; Pathak, A.; Saini, H.; Mayilraj,S. and Rishi, S.
Metabolic profiles and phylogenetic diversity of microbial communities from chlorinated pesticides contaminated sites of different geographical habitats of India. J. App. Microbiol., 109, 1458-1468, 2010.
Bhasin, S.; Cameotra, S.S. and. Modi, H.A
Actinomycetal diversity of western region of Madhya Pradesh. J. Adv. Developmental Res. 1, 132-138, 2010.
Joshi, K.K. and Sahni, G.
Molecular cloning, expression, purification and characterization of truncated
forms of human plasminogen in Pichia pastoris expression system. Process Biochem., 45, 1251-1260, 2010.
Yadav,S. and Sahni, G.
Probing the primary structural determinants of streptokinase inter-domain linkers by site-specific substitution and deletion mutagenesis. Biochim Biophys Acta., 1804, 1730-1737, 2010.
Mishra, N.K.; Agarwal, S. and Raghava, G.P.S.
Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule. BMC Pharmacol.,10: 8, 2010.
Chauhan, J.S. Mishra, N.K. and Raghava, G.P.S.
Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information. BMC Bioinformatics, 11: 301, 2010.
LaButti, K.; Mayilraj, S.; Lapidus, A. et al.
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T). Standards in Genomic Sciences, 3, 85-92, 2010.
Pal, K.; Kumar, S.; Sharma, S.; Garg, S.K.; Mohammad, S.Alam; Xu, H.E.; Agrawal, P. and Swaminathan, K.
Crystal structure of full length mycobacterium tuberculosis H37rv glycogen branching enzyme: insights of n-terminal β-Sandwich in substrate specificity and enzymatic activity. J. Biol. Chem., 285, 20897-20903, 2010.
Wangoo, N.; Kaushal, J.; Bhasin, K.K. and Suri, C.R.
Zeta potential based colorimetric immunoassay for the direct detection of diabetic marker HbA1c using gold nanoprobes. Chem. Comm., 46, 5755-5757, 2010.
Singh, V.; Gowthaman. U.; Jain, S.; Parihar, P. Banaskar, S. Gupta, P. Gupta, U.D. and Agrewala, J.N.
Co-administration of IL-7 and IL-15 with BCG amount enduring T cell memory response against M. tuberculosis. J. Infect. Dis., 202, 480-489, 2010.
Gowthaman, U.; Sathibabu, C. and Agrewala, J.N.
T cell help to B cells in germinal centers: putting the jigsaw together. Int. Rev. Immunol., 29, 403-420, 2010.
Moon, L.; Pal, M.; Kasetti, Y.; Bharatam, P. and Jolly, R.S.
Chiral Solvating Agents for Cyanohydrins and Carboxylic acids. J.Org. Chem., 75, 5487-5498, 2010.
Dave, S.; Dkhar, H.K.; Singh, M.P.; Gupta, G., Chandra, V.; Mahajan, S. and Gupta P.
Hexafluoroisopropanol induced helix-sheet transition of stem bromelain: Correlation to function. Int. J. Biochem. Cell. Biol., 42, 938-947, 2010.
Luthra-Guptasarma, M.,and Guptasarma, P.
Metal-catalyzed proteolysis, conformational antigenicity, photosensitized oxidation and electrical dysfunction explain the pathogenicity of protein aggregates. Medical Hypotheses, 75, 294-298, 2010.
Ansari, H. R. and Raghava, G. P. S.
Identification of NAD interacting residues in proteins. BMC Bioinformatics, 11:160, 2010.
Das, A.; Pathak, A.; Sinha, A.; Datt, M.; Singh, B.; Karthikeyan, S and Sarkar, D. A single amino acid substitution in the C terminus of PhoP determines DNA-binding specificity of the virulence-associated response regulator from Mycobacterium tuberculosis. J. Mol. Biol., 398, 647-656, 2010.
Ghosh, A.; Khurana, M.; Chauhan, A.; Takeo, M.; Chakraborti, A.K. and Jain, R.K.
Degradation of 4-Nitrophenol, 2-Chloro-4-nitrophenol, and 2,4-Dinitrophenol by Rhodococcus imtechensis Strain RKJ300. Environ. Sci. Technol., 44, 1069-1077, 2010.
Gahlot, S.; Khan, M.A.; Rishi, L.; and Majumdar, S.
Pentoxifylline augments TRAIL/Apo2L mediated apoptosis in Cutaneous T cell lymphoma (HuT-78 and MyLa) by modulating the expression of antiapoptotic proteins and death receptors. Biochem. Pharmacol., 77, 30-45, 2010.
Kumar, A. and Bachhawat, A.K
OXP1/YKL215c encodes an ATP-dependant 5-oxoprolinase in Saccharomyces cerevisiae: Functional Characterization, Domain structure and Identification of actin–like ATP-binding motifs in eukaryotic 5-oxoprolinases. FEMS Yeast Res., 10, 394-401, 2010.
Anand, A.; Duk, B.T.; Singh, S.; Akbas, M.Y.; Webster, D.A.; Stark, B.C. and Dikshit, K.L.
Redox mediated interactions of Vitreoscilla hemoglobin [VHb] with OxyR : novel regulation of VHb biosynthesis under oxidative stress. Biochem. J., 426, 271-280, 2010.
Kapur, M.; Bhatia, R.; Pandey, G.; Pandey, J.; Paul, D. and Jain R.K.
A case study for assessment of microbial community dynamics in genetically modified Bt cotton crop fields. Curr. Microbiol., 61, 118-124, 2010.
Mishra, N.K.; Agarwal, S. and Raghava, G.P.S.
Prediction of cytochrome P450 isoform responsible for metabolizing a drug molecule. BMC Pharmacol.,10: 8, 2010.
Chauhan, J.S. Mishra, N.K. and Raghava, G.P.S.
Prediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information. BMC Bioinformatics, 11: 301, 2010.
LaButti, K.; Mayilraj, S.; Lapidus, A. et al.
Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207T). Standards in Genomic Sciences, 3, 85-92, 2010.
Abd, H.; Soni, P.V.; Sami, S.M.; Saeed, A.; Raychaudhuri, S. and Sandström, G.
Interaction between Vibrio mimicus and Acanthamoeba castellanii. Environ. Microbiol. Reports, 2, 166-171, 2010.
Dhanjal, S. and Cameotra, S.S.
Aerobic biogenesis of selenium nanospheres by Bacillus cereus isolated from coalmine soil. Microbial Cell Factories, 9:52, 2010.
Dave, S.; Mahajan, S.; Chandra, V.; Dkhar, H.K.; Sambhavi and Gupta, P.
Specific molten globule conformation of stem bromelain at alkaline pH. Arch. Biochem. Biophy., 499, 26-31, 2010.
Haldar, A.K., Yadav, V.; Singhal, E.; Bisht, K.K.; Singh, A.; Bhaumik, S.; Basu, R.; Sen, Pradip* and Roy, Syamal
Leishmania donovani isolates with antimony-resistant but not -sensitive phenotype inhibit sodium antimony Gluconate-Induced Dendritic cell activation. PLoS Pathogens, 6(5), 1-21, e1000907, 2010.
Pratibha, J., Amandeep, K., Shenoy, B.D. and Bhat, D.J.
Caliciopsis indica sp. nov. from India. Mycosphere, 1, 65–72, 2010.
Dave, S.; Dkhar, H.K.; Singh, M.P.; Gupta, G.; Chandra, V.; Mahajan, S. And Gupta, P.
Hexafluoroisopropanol-induced helix-sheet transition of stem bromelain: Correlation to function. Int. J. Biochem. Cell Biol., 42, 938-947, 2010.
Meena, Netrapal; Kaur, Harsimran and Mondal, A. K.
Interactions among HAMP repeats act as an osmosensing molecular switch in a group III hybrid histidine kinase. J. Biol Chem 2010, 285,12121–12132.
Mathur, C.; Prakash, R.; Ali, A.; Kaur, J.; Cameotra, S.S. and N. Prakash, T.
Emulsification and Transesterification of Oil by a Soilborne Fungus, Syncephalastrum racemosum.. Defence Science Journal 2010, 60, 251-254.
Kapoor, D.; Singh, B.; Karthikeyan, S. and Guptasarma, P.
A functional comparison of the TET aminopeptidases of P. furiosus and B. subtilis with a protein-engineered variant recombining the former's structure with the latter's active site. Enzyme Microb. Tech. 46, 1-8, 2010
Kumar, A. and Bachhawat, A.K.
Is a futile cycle, formed between two ATP-dependant γ-glutamyl cycle enzymes, γ-glutamyl cysteine synthetase and 5-oxoprolinase, the cause of cellular ATP depletion seen in nephrotic cystinosis? J. Biosciences ,35, 21-25, 2010.
Garg, A., Tewari, R. and Raghava, G. P. S.
KiDoQ: using docking based energy scores to develop ligand based model for predicting antibacterials. BMC Bioinformatics, 11:125, 2010.
Singla, D., Sharma, A., Kaur, J., Panwar, B. and Raghava, G. P. S.
BIAdb: a curated database of benzylisoquinoline alkaloids. BMC Pharmacology, 10, 4, 2010.
Lata, S., Mishra, N.K. and Raghava, G. P. S.
AntiBP2: Improved version of antibacterial peptide prediction. BMC Bioinformatics, 11:S19, 2010.
Mishra, N.K. and Raghava, G. P. S.
Prediction of FAD interacting residues in a protein from its primary sequence using evolutionary information. BMC Bioinformatics, 11:S48, 2010.
Garg, A., Tewari, R. and Raghava, G. P. S.
Virtual Screening of potential drug-like inhibitors against Lysine/DAP pathway of Mycobacterium tuberculosis. BMC Bioinformatics, 11:S53, 2010.
Chaudhary N, Mahajan L, Madan T, Kumar A, Raghava, G. P. S., Katti SB, Haq W and Sarma PU.
Prophylactic and Therapeutic Potential of Asp f1 Epitopes in Naiive and Sensitized BALB/c Mice. Immune Netw. 9, 179-91, 2010.
Tripathi, R.; Singh, N.S.; Dureja, C.; Haldar, S.; Mondal, A.K. and Raychaudhuri, S.
VopF, a type III effector protein from a non-O1, non-O139 V. cholerae strain demonstrates toxicity in a Saccharomyces cerevisiae model. J. Med. Microbiol., 59, 17-24, 2010.
Ashish; Solanki, A.K.; Boone, C.D. and Krueger, J.K.
Global structure of HIV-1 neutralizing antibody IgG1 b12 is asymmetric. Biochem. Biophy.Res. Comm., 391, 947-951, 2010.
Hadi Abd; Valeru, S.P.; Sami, S.M.; Saeed, A. and Raychaudhuri, S.
Interaction between Vibrio mimicus and Acanthamoeba castellanii (p ) Gunnar Sandström. Environ Microbiol Reports, (Online: DOI: 10.1111/j.1758-2229.2009.00129.x)
Ansari, H.R.; Flower, D.R. and Raghava, G.P.S.
AntigenDB: an immunoinformatics database of pathogen antigens. Nucleic Acids Res., 38, D847-853, 2010.
Cameotra, S.S.
Biosurfactant-enhanced bioremediation of hydrophobic pollutants. PAC, IUPAC 82(1): 97-116, 2010.
Sengar, K.P.S.
Building a Digital Institutional Repository Service (DIRS): IMTECH (CSIR) Initiative. Proceedings of the 3rd International Conference on Digital Libraries (ICDL)-2010. Vol.1, Page no. 600-605.
Cameotra,S.S.
Geographical Indications. CSIR NEWS Progress, Promise and Prospects,60, 5-6, 2010
Cameotra, Swaranjit Singh
Importance and Role of a Service Culture Collection. WFCC July 2010.
Sengar, K.P.S.
Towards the Building of Digital Institutional Repositories of CSIR laboratories:
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Shivaji,S. and Prasad, G.S. 2009. Antarctic Yeasts: Biodiversity and Potential Applications. In: Yeast Biotechnology: Diversity and Applications.
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