BLASTP 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P17739|OSPB1_BORBU Outer surface protein B - Borrelia
burgdorferi (Lyme disease spirochete).
(296 letters)
Database: microbial_pathogendb
1,433,584 sequences; 450,636,632 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_045689.1| outer surface protein B (ospB) [Borrelia b... 528 e-149
ref|YP_853838.1| outer surface protein B [Borrelia afzelii ... 363 2e-99
ref|YP_063284.1| outer surface protein B [Borrelia garinii ... 360 1e-98
ref|NP_045688.1| outer surface protein A (ospA) [Borrelia b... 243 3e-63
ref|YP_853837.1| outer surface protein A [Borrelia afzelii ... 238 1e-61
ref|YP_063283.1| outer surface protein A [Borrelia garinii ... 235 5e-61
ref|NP_765804.1| streptococcal hemagglutinin protein [Staph... 51 2e-05
ref|YP_803612.1| Subtilisin-like serine protease [Pediococc... 51 2e-05
ref|YP_189831.1| serine threonine rich antigen [Staphylococ... 50 5e-05
ref|YP_813674.1| Surface antigen [Lactobacillus delbrueckii... 49 9e-05
ref|YP_891655.1| surface array protein [Campylobacter fetus... 49 1e-04
ref|YP_719446.1| possible large adhesin [Haemophilus somnus... 48 2e-04
ref|YP_091336.1| Bpr [Bacillus licheniformis ATCC 14580] 48 2e-04
ref|YP_078924.1| bacillopeptidase F [Bacillus licheniformis... 48 2e-04
ref|YP_619616.1| hypothetical protein Ldb1963 [Lactobacillu... 47 5e-04
ref|YP_566858.1| hypothetical protein Mbur_2245 [Methanococ... 46 6e-04
ref|YP_495223.1| LPXTG-motif cell wall surface anchor famil... 46 8e-04
ref|YP_718416.1| possible large adhesin [Haemophilus somnus... 45 0.001
ref|YP_187464.1| LPXTG cell wall surface anchor family prot... 45 0.001
ref|YP_501439.1| hypothetical protein SAOUHSC_02990 [Staphy... 45 0.001
ref|ZP_00604835.1| Surface protein from Gram-positive cocci... 45 0.001
ref|NP_375773.1| hypothetical protein SA2447 [Staphylococcu... 45 0.001
ref|NP_373178.1| serine-threoinine rich antigen [Staphyloco... 45 0.001
ref|NP_647392.1| hypothetical protein MW2575 [Staphylococcu... 45 0.002
ref|YP_044654.1| putative cell wall-anchored protein [Staph... 45 0.002
ref|YP_303678.1| hypothetical protein Mbar_A0111 [Methanosa... 44 0.003
ref|NP_604343.1| Fusobacterium outer membrane protein famil... 44 0.004
ref|YP_581104.1| ATPase [Psychrobacter cryohalolentis K5] 44 0.004
ref|YP_561402.1| hypothetical protein Sden_0384 [Shewanella... 44 0.004
ref|YP_891684.1| surface array protein [Campylobacter fetus... 43 0.005
ref|NP_439153.1| immunoglobin A1 protease [Haemophilus infl... 43 0.007
ref|YP_252241.1| hypothetical protein SH0326 [Staphylococcu... 43 0.007
ref|YP_803624.1| Predicted outer membrane protein [Pediococ... 42 0.011
ref|NP_389413.1| bacillopeptidase F [Bacillus subtilis subs... 42 0.015
ref|YP_603083.1| Putative Fe3+-siderophore transport protei... 42 0.015
ref|NP_458235.1| putative autotransporter [Salmonella enter... 41 0.019
ref|NP_807449.1| putative autotransporter [Salmonella enter... 41 0.019
ref|NP_462591.1| putative inner membrane protein [Salmonell... 41 0.019
ref|YP_964748.1| hypothetical protein Sputw3181_3382 [Shewa... 41 0.025
ref|YP_218602.1| putative inner membrane protein [Salmonell... 41 0.025
ref|YP_434699.1| hypothetical protein HCH_03530 [Hahella ch... 40 0.032
ref|YP_813898.1| Adhesion exoprotein [Lactobacillus gasseri... 40 0.032
ref|YP_189847.1| lipase [Staphylococcus epidermidis RP62A] 40 0.042
ref|NP_720544.1| hypothetical protein SMU.63c [Streptococcu... 40 0.055
ref|YP_374298.1| VCBS [Pelodictyon luteolum DSM 273] 40 0.055
ref|NP_758130.1| P35 lipoprotein homolog [Mycoplasma penetr... 40 0.055
ref|NP_781157.1| putative S-layer protein/N-acetylmuramoyl-... 39 0.072
ref|YP_253080.1| hypothetical protein SH1165 [Staphylococcu... 39 0.072
ref|YP_193900.1| putative mucus binding protein [Lactobacil... 39 0.072
ref|NP_665365.1| hypothetical protein SpyM3_1561 [Streptoco... 39 0.094
ref|NP_801568.1| hypothetical protein SPs0306 [Streptococcu... 39 0.094
ref|NP_603198.1| Hemolysin [Fusobacterium nucleatum subsp. ... 39 0.094
ref|NP_607878.1| hypothetical protein spyM18_1868 [Streptoc... 39 0.094
ref|YP_599207.1| Putative Fe3+-siderophore transport protei... 39 0.094
ref|YP_535439.1| hypothetical protein LSL_0547 [Lactobacill... 39 0.094
ref|YP_132040.1| hypothetical methyl-accepting chemotaxis p... 39 0.094
ref|NP_357880.1| Hyaluronate lyase precursor (hyaluronidase... 39 0.12
ref|NP_269809.1| hypothetical protein sharing similarity wi... 39 0.12
ref|NP_207323.1| cag pathogenicity island protein (cag7) [H... 39 0.12
ref|YP_815805.1| hyaluronate lyase precursor [Streptococcus... 39 0.12
ref|YP_282893.1| putative Fe3+-siderophore transport protei... 39 0.12
ref|YP_060840.1| Putative Fe3+-siderophore transport protei... 39 0.12
ref|NP_981779.1| LPXTG-motif cell wall anchor domain protei... 38 0.16
ref|YP_656990.1| cell surface glycoprotein precursor [Haloq... 38 0.16
ref|YP_378932.1| Parallel beta-helix repeat [Chlorobium chl... 38 0.16
ref|YP_424228.1| hypothetical protein MCAP_0241 [Mycoplasma... 38 0.16
ref|YP_699541.1| hypothetical protein CPR_2265 [Clostridium... 38 0.16
ref|YP_248929.1| HMW2A, high molecular weight adhesin 2 [Ha... 38 0.16
ref|NP_774564.1| hypothetical protein bll7924 [Bradyrhizobi... 38 0.21
ref|YP_601153.1| Putative Fe3+-siderophore transport protei... 38 0.21
ref|YP_597265.1| putative Fe3+-siderophore transport protei... 38 0.21
ref|YP_535766.1| Fibronectin-binding protein / Fibrinogen-b... 38 0.21
ref|YP_699841.1| phage infection protein, putative [Clostri... 38 0.21
ref|YP_417060.1| iron-regulated surface protein [Staphyloco... 38 0.21
ref|YP_696787.1| hypothetical protein CPF_2364 [Clostridium... 37 0.27
ref|NP_562046.1| phage-related hypothetical protein [Clostr... 37 0.27
ref|YP_042074.1| putative serine rich repeat containing pro... 37 0.27
ref|NP_245651.1| Hsf [Pasteurella multocida subsp. multocid... 37 0.27
ref|NP_758120.1| hypothetical protein MYPE7300 [Mycoplasma ... 37 0.27
ref|NP_784025.1| cell surface protein precursor [Lactobacil... 37 0.36
ref|YP_877681.1| hypothetical protein NT01CX_1600 [Clostrid... 37 0.36
ref|YP_959861.1| flagellin domain protein [Marinobacter aqu... 37 0.36
ref|YP_280985.1| putative Fe3+-siderophore transport protei... 37 0.36
ref|YP_446728.1| flagellin [Salinibacter ruber DSM 13855] 37 0.36
ref|YP_311286.1| phage protein-related [Shigella sonnei Ss046] 37 0.36
ref|YP_193148.1| hypothetical protein LBA0222 [Lactobacillu... 37 0.36
ref|NP_347459.1| Predicted membrane protein [Clostridium ac... 37 0.36
ref|NP_868817.1| probable threonine/tyrosine-specific prote... 37 0.47
ref|YP_050296.1| hypothetical protein ECA2203 [Erwinia caro... 37 0.47
ref|NP_696509.1| probable solute-binding protein of ABC tra... 37 0.47
ref|YP_719366.1| possible large adhesin [Haemophilus somnus... 37 0.47
ref|NP_645334.1| Ser-Asp rich fibrinogen-binding bone sialo... 37 0.47
ref|NP_373773.1| Ser-Asp rich fibrinogen-binding, bone sial... 37 0.47
ref|NP_371086.1| Ser-Asp rich fibrinogen-binding, bone sial... 37 0.47
ref|YP_897353.1| possible periplasmic component of efflux s... 37 0.47
ref|YP_794870.1| Cell surface protein [Lactobacillus brevis... 37 0.47
ref|YP_424445.1| lipoprotein, putative [Mycoplasma capricol... 37 0.47
ref|YP_042648.1| putative surface anchored protein [Staphyl... 37 0.47
ref|YP_253081.1| hypothetical protein SH1166 [Staphylococcu... 37 0.47
ref|NP_267008.1| hypothetical protein L73264 [Lactococcus l... 37 0.47
ref|NP_348857.1| Protein shares with cyclomaltodextrin gluc... 37 0.47
ref|NP_964984.1| hypothetical protein LJ1128 [Lactobacillus... 37 0.47
ref|NP_297068.1| polymorphic membrane protein B/C family [C... 36 0.61
ref|NP_833065.1| hypothetical protein BC3326 [Bacillus cere... 36 0.61
ref|NP_785782.1| hypothetical protein lp_2304 [Lactobacillu... 36 0.61
ref|YP_448004.1| ComB2 [Methanosphaera stadtmanae DSM 3091] 36 0.61
ref|YP_207120.1| iron-regulated protein FrpC [Vibrio fische... 36 0.61
ref|YP_819388.1| Predicted membrane protein [Leuconostoc me... 36 0.80
ref|NP_647375.1| zinc metalloproteinase aureolysin [Staphyl... 36 0.80
ref|NP_602747.1| Serine protease [Fusobacterium nucleatum s... 36 0.80
ref|YP_268922.1| electron transport complex protein RnfC [C... 36 0.80
ref|YP_187447.1| zinc metalloproteinase aureolysin [Staphyl... 36 0.80
ref|YP_501422.1| aureolysin, putative [Staphylococcus aureu... 36 0.80
ref|YP_852428.1| putative tail fiber protein [Escherichia c... 36 0.80
ref|YP_495206.1| zinc metalloproteinase aureolysin [Staphyl... 36 0.80
ref|YP_540528.1| putative tail fiber protein [Escherichia c... 36 0.80
ref|YP_424039.1| lipoprotein, putative [Mycoplasma capricol... 36 0.80
ref|YP_447286.1| hypothetical protein Msp_0226 [Methanospha... 36 0.80
ref|YP_127806.1| hypothetical protein lpl2476 [Legionella p... 36 0.80
ref|YP_044637.1| zinc metalloproteinase aureolysin precurso... 36 0.80
ref|YP_417959.1| zinc metalloproteinase aureolysin [Staphyl... 36 0.80
ref|YP_013502.1| lysM domain protein [Listeria monocytogene... 36 0.80
ref|NP_929220.1| flagellar hook-associated protein [Photorh... 35 1.0
ref|YP_087940.1| hypothetical protein MS0748 [Mannheimia su... 35 1.0
ref|NP_783071.1| membrane associated protein [Clostridium t... 35 1.0
ref|YP_349485.1| Outer membrane autotransporter barrel [Pse... 35 1.0
ref|YP_718593.1| possible large adhesin [Haemophilus somnus... 35 1.0
ref|YP_719821.1| possible large adhesin [Haemophilus somnus... 35 1.0
ref|NP_375756.1| zinc metalloproteinase aureolysin [Staphyl... 35 1.0
ref|NP_373161.1| zinc metalloproteinase aureolysin [Staphyl... 35 1.0
ref|YP_185494.1| sdrD protein [Staphylococcus aureus subsp.... 35 1.0
ref|YP_499118.1| sdrD protein, putative [Staphylococcus aur... 35 1.0
ref|YP_909957.1| probable solute-binding protein of ABC tra... 35 1.0
ref|YP_493250.1| sdrD protein [Staphylococcus aureus subsp.... 35 1.0
ref|YP_535846.1| hypothetical protein LSL_0953 [Lactobacill... 35 1.0
ref|YP_943727.1| filamentous haemagglutinin family outer me... 35 1.0
ref|YP_379546.1| VCBS [Chlorobium chlorochromatii CaD3] 35 1.0
ref|YP_447110.1| member of asn/thr-rich large protein famil... 35 1.0
ref|YP_807854.1| hypothetical protein LSEI_2694 [Lactobacil... 35 1.0
ref|YP_394717.1| Hypothetical cell surface protein precurso... 35 1.0
ref|NP_244996.1| PfhB2 [Pasteurella multocida subsp. multoc... 35 1.0
ref|NP_326524.1| MEMBRANE NUCLEASE, LIPOPROTEIN [Mycoplasma... 35 1.0
ref|NP_975432.1| hypothetical protein MSC_0446 [Mycoplasma ... 35 1.0
ref|YP_015983.1| type I restriction enzyme m protein [Mycop... 35 1.0
ref|NP_800952.1| putative hemagglutinin/hemolysin-related p... 35 1.4
ref|NP_786373.1| extracellular protein [Lactobacillus plant... 35 1.4
ref|NP_719842.1| RTX toxin, putative [Shewanella oneidensis... 35 1.4
ref|YP_723033.1| Hemolysin-type calcium-binding region [Tri... 35 1.4
ref|YP_796402.1| hypothetical protein LVIS_A10 [Lactobacill... 35 1.4
ref|YP_907503.1| transcription termination factor Rho [Myco... 35 1.4
ref|NP_220569.1| dihydrolipoamide acetyltransferase [Ricket... 35 1.4
ref|NP_471841.1| hypothetical protein lin2511 [Listeria inn... 35 1.4
ref|NP_469464.1| putative tape-measure [Bacteriophage A118]... 35 1.4
ref|YP_678943.1| DNA topoisomerase type I (omega protein) [... 35 1.4
ref|YP_016034.1| variable surface protein mvspK [Mycoplasma... 35 1.4
ref|NP_940432.1| Putative membrane anchored protein [Coryne... 35 1.4
ref|NP_992910.1| flagellar hook-associated protein [Yersini... 35 1.8
ref|NP_784544.1| cell surface protein precursor [Lactobacil... 35 1.8
ref|NP_405405.1| flagellar hook-associated protein [Yersini... 35 1.8
ref|YP_721957.1| hypothetical protein Tery_2255 [Trichodesm... 35 1.8
ref|YP_720892.1| AAA ATPase, central region [Trichodesmium ... 35 1.8
ref|NP_646904.1| truncated FmtB [Staphylococcus aureus subs... 35 1.8
ref|NP_419264.1| transcriptional regulator, GntR family [Ca... 35 1.8
ref|NP_669772.1| flagellar hook-associated protein [Yersini... 35 1.8
ref|NP_268962.1| putative extracellular matrix binding prot... 35 1.8
ref|YP_866886.1| Hemolysin-type calcium-binding region [Mag... 35 1.8
ref|YP_648210.1| flagellar hook-associated protein 2 [Yersi... 35 1.8
ref|YP_651129.1| flagellar hook-associated protein 2 [Yersi... 35 1.8
ref|YP_434380.1| uncharacterized protein with a C-terminal ... 35 1.8
ref|YP_300225.1| cell wall-anchored protein [Staphylococcus... 35 1.8
ref|YP_424804.1| hypothetical protein MCAP_0862 [Mycoplasma... 35 1.8
ref|YP_341300.1| AsmA protein [Pseudoalteromonas haloplankt... 35 1.8
ref|YP_393080.1| Flagellar hook-associated protein [Thiomic... 35 1.8
ref|YP_456280.1| hypothetical protein AYWB_084 [Aster yello... 35 1.8
ref|YP_567649.1| signal recognition particle protein [Rhodo... 35 1.8
ref|YP_281924.1| putative extracellular matrix binding prot... 35 1.8
ref|YP_070239.1| flagellar hook-associated protein [Yersini... 35 1.8
ref|YP_194478.1| surface protein [Lactobacillus acidophilus... 35 1.8
ref|YP_305071.1| 60 kDa chaperonin [Methanosarcina barkeri ... 35 1.8
ref|NP_439873.1| Hsf-like protein [Haemophilus influenzae R... 34 2.3
ref|NP_831846.1| hypothetical Membrane Spanning Protein [Ba... 34 2.3
ref|YP_719397.1| hypothetical protein HS_1185 [Haemophilus ... 34 2.3
ref|YP_696015.1| hypothetical protein CPF_1572 [Clostridium... 34 2.3
ref|NP_563023.1| hypothetical protein CPE2107 [Clostridium ... 34 2.3
ref|NP_561136.1| hypothetical protein CPE0220 [Clostridium ... 34 2.3
ref|NP_712640.1| integrin homolog [Leptospira interrogans s... 34 2.3
ref|NP_464920.1| hypothetical protein lmo1395 [Listeria mon... 34 2.3
ref|YP_186963.1| fmtB protiein [Staphylococcus aureus subsp... 34 2.3
ref|YP_500880.1| hypothetical protein SAOUHSC_02404 [Staphy... 34 2.3
ref|YP_494755.1| truncated FmtB protein [Staphylococcus aur... 34 2.3
ref|YP_536584.1| Oligopeptide-binding protein oppA [Lactoba... 34 2.3
ref|YP_672417.1| probable hemagglutinin-related protein [Es... 34 2.3
ref|YP_483975.1| signal recognition particle protein [Rhodo... 34 2.3
ref|YP_394786.1| Hypothetical cell surface protein precurso... 34 2.3
ref|NP_346696.1| Hypothetical protein, CF-17 family [Clostr... 34 2.3
ref|YP_427694.1| hypothetical protein Rru_A2610 [Rhodospiri... 34 2.3
ref|NP_988671.1| signal recognition particle protein Srp54 ... 34 2.3
ref|NP_950780.1| hypothetical protein PAM528 [Onion yellows... 34 2.3
ref|NP_687455.1| cell wall surface anchor family protein [S... 34 3.0
ref|NP_696481.1| peptidoglycan synthetase; penicillin-bindi... 34 3.0
ref|YP_818877.1| hypothetical protein LEUM_1411 [Leuconosto... 34 3.0
ref|YP_696824.1| hypothetical protein CPF_2401 [Clostridium... 34 3.0
ref|NP_563062.1| hypothetical protein CPE2146 [Clostridium ... 34 3.0
ref|NP_874510.1| Outer membrane efflux protein [Prochloroco... 34 3.0
ref|YP_665399.1| heat-shock chaperonin GroEL [Helicobacter ... 34 3.0
ref|YP_664207.1| hypothetical protein Hac_0371 [Helicobacte... 34 3.0
ref|YP_378930.1| Parallel beta-helix repeat [Chlorobium chl... 34 3.0
ref|YP_814610.1| Chromosome segregation ATPase [Lactobacill... 34 3.0
ref|YP_813993.1| Adhesion exoprotein [Lactobacillus gasseri... 34 3.0
ref|YP_342191.1| chemotaxis sensory transducer [Nitrosococc... 34 3.0
ref|NP_111647.1| Chaperonin GroEL (HSP60 family) [Thermopla... 34 3.0
ref|NP_266428.1| autolysin [Lactococcus lactis subsp. lacti... 34 3.0
ref|NP_349685.1| TPR-repeat-containing protein; Cell-adhesi... 34 3.0
ref|NP_968343.1| cell wall surface anchor family protein [B... 34 3.0
ref|YP_515892.1| adenylate cyclase [Chlamydophila felis Fe/... 34 3.0
ref|NP_927898.1| hypothetical protein plu0548 [Photorhabdus... 33 4.0
ref|YP_880496.1| adenylate and Guanylate cyclase catalytic ... 33 4.0
ref|NP_870028.1| hypothetical protein-signal peptide predic... 33 4.0
ref|NP_994376.1| hemolysin [Yersinia pestis biovar Microtus... 33 4.0
ref|NP_784891.1| cell surface protein precursor [Lactobacil... 33 4.0
ref|NP_407172.1| hemolysin [Yersinia pestis CO92] 33 4.0
ref|YP_719270.1| possible large adhesin [Haemophilus somnus... 33 4.0
ref|NP_697114.1| outer membrane protein [Brucella suis 1330] 33 4.0
ref|NP_615473.1| surface antigen gene [Methanosarcina aceti... 33 4.0
ref|NP_667366.1| hemolysin precursor [Yersinia pestis KIM] 33 4.0
ref|NP_765958.1| glycerol ester hydrolase [Staphylococcus e... 33 4.0
ref|YP_187618.1| lipase, putative [Staphylococcus epidermid... 33 4.0
ref|NP_345623.1| immunoglobulin A1 protease [Streptococcus ... 33 4.0
ref|NP_628023.1| dehydrogenase [Streptomyces coelicolor A3(2)] 33 4.0
ref|YP_877981.1| flagellar hook assembly protein FlgD [Clos... 33 4.0
ref|YP_645952.1| hemolysin [Yersinia pestis Nepal516] 33 4.0
ref|YP_649936.1| hemolysin [Yersinia pestis Antiqua] 33 4.0
ref|YP_437932.1| hypothetical protein HCH_06889 [Hahella ch... 33 4.0
ref|YP_423439.1| Methyl-accepting chemotaxis protein [Magne... 33 4.0
ref|YP_814253.1| Adhesion Exoprotein [Lactobacillus gasseri... 33 4.0
ref|YP_813996.1| hypothetical protein LGAS_0146 [Lactobacil... 33 4.0
ref|NP_326482.1| hypothetical protein MYPU_6510 [Mycoplasma... 33 4.0
ref|YP_566590.1| thermosome subunit, group II chaperonin [M... 33 4.0
ref|NP_946656.1| possible flagellar hook length determinati... 33 4.0
ref|NP_964159.1| hypothetical protein LJ0143 [Lactobacillus... 33 4.0
ref|NP_866735.1| hypothetical protein RB5501 [Rhodopirellul... 33 5.2
ref|YP_825901.1| Ig domain protein, group 2 domain protein ... 33 5.2
ref|NP_688040.1| hypothetical protein SAG1030 [Streptococcu... 33 5.2
ref|YP_818876.1| hypothetical protein LEUM_1410 [Leuconosto... 33 5.2
ref|NP_614987.1| cheR methyltransferase [Methanosarcina ace... 33 5.2
ref|NP_375274.1| FmtB protein [Staphylococcus aureus subsp.... 33 5.2
ref|NP_372684.1| FmtB protein [Staphylococcus aureus subsp.... 33 5.2
ref|NP_290185.1| putative adhesin [Escherichia coli O157:H7... 33 5.2
ref|NP_489146.1| hypothetical protein all5106 [Nostoc sp. P... 33 5.2
ref|YP_186621.1| hypothetical protein SACOL1788 [Staphyloco... 33 5.2
ref|YP_500358.1| hypothetical protein SAOUHSC_01854 [Staphy... 33 5.2
ref|YP_861101.1| phosphoglucomutase/phosphomannomutase [Gra... 33 5.2
ref|NP_312507.1| hypothetical protein ECs4480 [Escherichia ... 33 5.2
ref|YP_605934.1| Surface adhesion protein [Pseudomonas ento... 33 5.2
ref|YP_691242.1| hypothetical protein SFV_3929 [Shigella fl... 33 5.2
ref|YP_494378.1| hypothetical protein SAUSA300_1684 [Staphy... 33 5.2
ref|YP_536023.1| Transcriptional regulator [Lactobacillus s... 33 5.2
ref|YP_801534.1| hypothetical protein LBJ_2303 [Leptospira ... 33 5.2
ref|YP_797293.1| hypothetical protein LBL_0804 [Leptospira ... 33 5.2
ref|YP_301632.1| putative zinc metalloprotease [Staphylococ... 33 5.2
ref|YP_805708.1| Predicted membrane protein [Lactobacillus ... 33 5.2
ref|YP_374310.1| VCBS [Pelodictyon luteolum DSM 273] 33 5.2
ref|YP_569932.1| secretion protein HlyD [Rhodopseudomonas p... 33 5.2
ref|YP_312580.1| putative adhesin [Shigella sonnei Ss046] 33 5.2
ref|YP_409914.1| putative adhesin [Shigella boydii Sb227] 33 5.2
ref|YP_699422.1| hypothetical protein CPR_2113 [Clostridium... 33 5.2
ref|YP_697544.1| LPXTG-motif cell wall anchor domain protei... 33 5.2
ref|YP_086232.1| cell surface protein [Bacillus cereus E33L] 33 5.2
ref|NP_907883.1| hypothetical protein WS1761 [Wolinella suc... 33 5.2
ref|YP_443237.1| filamentous haemagglutinin [Burkholderia t... 33 5.2
ref|YP_013353.1| flagellar M-ring protein [Listeria monocyt... 33 5.2
ref|YP_515719.1| polymorphic outer membrane protein B [Chla... 33 5.2
ref|YP_264158.1| hypothetical protein Psyc_0871 [Psychrobac... 33 5.2
ref|YP_067136.1| dihydrolipoamide acetyltransferase [Ricket... 33 5.2
ref|NP_964510.1| hypothetical protein LJ0484 [Lactobacillus... 33 5.2
ref|YP_025499.1| hypothetical protein pKAP298p34 [Caedibact... 33 6.7
ref|NP_971361.1| magnesium chelatase, subunit D/I family [T... 33 6.7
ref|NP_389073.1| hypothetical protein BSU11910 [Bacillus su... 33 6.7
ref|NP_979653.1| lipoprotein, putative [Bacillus cereus ATC... 33 6.7
ref|YP_088359.1| FhaB protein [Mannheimia succiniciproducen... 33 6.7
ref|NP_735511.1| hypothetical protein gbs1065 [Streptococcu... 33 6.7
ref|NP_722325.1| levansucrase precursor; beta-D-fructosyltr... 33 6.7
ref|YP_389735.1| methyl-accepting chemotaxis sensory transd... 33 6.7
ref|YP_721699.1| filamentous haemagglutinin family outer me... 33 6.7
ref|YP_818756.1| hypothetical protein LEUM_1286 [Leuconosto... 33 6.7
ref|NP_561802.1| hypothetical protein CPE0886 [Clostridium ... 33 6.7
ref|NP_637389.1| YapH protein [Xanthomonas campestris pv. c... 33 6.7
ref|NP_602617.1| Hemolysin [Fusobacterium nucleatum subsp. ... 33 6.7
ref|NP_765950.1| Ser-Asp rich fibrinogen-binding,bone sialo... 33 6.7
ref|NP_765785.1| phage infection protein [Staphylococcus ep... 33 6.7
ref|YP_189813.1| phage infection protein [Staphylococcus ep... 33 6.7
ref|NP_373518.1| hypothetical protein SA0272 [Staphylococcu... 33 6.7
ref|NP_370807.1| hypothetical protein SAV0283 [Staphylococc... 33 6.7
ref|YP_185167.1| hypothetical protein SACOL0272 [Staphyloco... 33 6.7
ref|YP_186319.1| Cell wall associated fibronectin-binding p... 33 6.7
ref|YP_499969.1| hypothetical protein SAOUHSC_01447 [Staphy... 33 6.7
ref|YP_498852.1| hypothetical protein SAOUHSC_00258 [Staphy... 33 6.7
ref|NP_222730.1| chaperonin GroEL [Helicobacter pylori J99] 33 6.7
ref|NP_206812.1| chaperonin GroEL [Helicobacter pylori 26695] 33 6.7
ref|YP_861684.1| conserved hypothetical protein, secreted [... 33 6.7
ref|YP_795546.1| Cell wall-associated hydrolase [Lactobacil... 33 6.7
ref|YP_494024.1| cell surface protein [Staphylococcus aureu... 33 6.7
ref|YP_492993.1| hypothetical protein SAUSA300_0279 [Staphy... 33 6.7
ref|YP_670402.1| putative outer membrane protein (RatA-like... 33 6.7
ref|YP_906319.1| conserved transmembrane protein [Mycobacte... 33 6.7
ref|YP_626751.1| chaperone and heat shock protein [Helicoba... 33 6.7
ref|YP_801850.1| hypothetical protein LBJ_2670 [Leptospira ... 33 6.7
ref|YP_796929.1| hypothetical protein LBL_0396 [Leptospira ... 33 6.7
ref|YP_392828.1| hypothetical protein Tmden_0312 [Thiomicro... 33 6.7
ref|YP_332688.1| possible adhesin/hemolysin [Burkholderia p... 33 6.7
ref|YP_390505.1| hypothetical protein Tcr_0235 [Thiomicrosp... 33 6.7
ref|YP_328230.1| polymorphic outer membrane protein [Chlamy... 33 6.7
ref|YP_243236.1| YapH protein [Xanthomonas campestris pv. c... 33 6.7
ref|YP_061037.1| M protein [Streptococcus pyogenes MGAS10394] 33 6.7
ref|YP_042058.1| zinc metalloproteinase aureolysin precurso... 33 6.7
ref|YP_041202.1| hypothetical protein SAR1816 [Staphylococc... 33 6.7
ref|YP_039744.1| hypothetical protein SAR0280 [Staphylococc... 33 6.7
ref|YP_039349.1| collagen adhesion protein [Bacillus thurin... 33 6.7
ref|YP_062649.1| chaperonin GroEL [Leifsonia xyli subsp. xy... 33 6.7
ref|YP_252086.1| hypothetical protein SH0171 [Staphylococcu... 33 6.7
ref|YP_091787.1| hypothetical protein BLi02210 [Bacillus li... 33 6.7
ref|YP_079371.1| hypothetical protein BL05205 [Bacillus lic... 33 6.7
ref|NP_110052.1| hypothetical protein MPN364 [Mycoplasma pn... 33 6.7
ref|NP_757486.1| chaperonin GroEL [Mycoplasma penetrans HF-2] 33 6.7
ref|YP_194457.1| surface protein [Lactobacillus acidophilus... 33 6.7
ref|YP_304367.1| putative surface layer protein [Methanosar... 33 6.7
ref|YP_014012.1| hypothetical protein LMOf2365_1414 [Lister... 33 6.7
ref|NP_945598.1| signal recognition particle protein [Rhodo... 33 6.7
ref|NP_964086.1| serine protease do-like HtrA [Lactobacillu... 33 6.7
ref|NP_879378.1| autotransporter [Bordetella pertussis Toha... 33 6.7
ref|NP_882803.1| autotransporter [Bordetella parapertussis ... 33 6.7
ref|NP_887002.1| autotransporter [Bordetella bronchiseptica... 33 6.7
ref|YP_635077.1| methyl-accepting chemotaxis protein [Myxoc... 33 6.7
ref|YP_291532.1| Heat shock protein DnaJ, N-terminal [Proch... 32 8.8
ref|ZP_00603273.1| Peptidase U35, phage prohead HK97:Phage ... 32 8.8
ref|NP_834599.1| Cell surface protein [Bacillus cereus ATCC... 32 8.8
ref|NP_785363.1| hypothetical protein lp_1799 [Lactobacillu... 32 8.8
ref|YP_330101.1| cell wall surface anchor family protein [S... 32 8.8
ref|YP_811104.1| Biotin carboxyl carrier protein [Oenococcu... 32 8.8
ref|NP_645074.1| hypothetical protein MW0259 [Staphylococcu... 32 8.8
ref|YP_695044.1| membrane protein, MmpL family [Clostridium... 32 8.8
ref|YP_697282.1| hypothetical protein CPF_2918 [Clostridium... 32 8.8
ref|NP_150043.1| hypothetical protein PCP50 [Clostridium pe... 32 8.8
ref|YP_066096.1| similar to methyl-accepting chemotaxis pro... 32 8.8
ref|NP_273539.1| hemagglutinin/hemolysin-related protein [N... 32 8.8
ref|YP_513646.1| DNA recombination protein RmuC family prot... 32 8.8
ref|NP_897046.1| hypothetical protein SYNW0953 [Synechococc... 32 8.8
ref|YP_895778.1| hypothetical protein BALH_3006 [Bacillus t... 32 8.8
ref|YP_763459.1| DNA recombination protein RmuC [Francisell... 32 8.8
ref|YP_606687.1| outer membrane autotransporter [Pseudomona... 32 8.8
ref|YP_908927.1| hypothetical protein BAD_0064 [Bifidobacte... 32 8.8
ref|YP_656868.1| halomucin [Haloquadratum walsbyi DSM 16790] 32 8.8
ref|YP_448304.1| predicted modulator of DNA gyrase [Methano... 32 8.8
ref|YP_340948.1| TonB-dependent receptor [Pseudoalteromonas... 32 8.8
ref|YP_749861.1| flagellar hook-associated protein FlgK [Sh... 32 8.8
ref|YP_395262.1| Hypothetical extracellular protein precurs... 32 8.8
ref|YP_097869.1| putative outer membrane protein probably i... 32 8.8
ref|YP_161312.1| hypothetical protein BGP027 [Borrelia gari... 32 8.8
ref|YP_697499.1| microbial collagenase [Clostridium perfrin... 32 8.8
ref|YP_042384.1| hypothetical protein SAS0259 [Staphylococc... 32 8.8
ref|YP_252821.1| hypothetical protein SH0906 [Staphylococcu... 32 8.8
ref|NP_266637.1| prophage pi1 protein 46 [Lactococcus lacti... 32 8.8
ref|YP_808509.1| hypothetical protein LACR_0486 [Lactococcu... 32 8.8
ref|YP_210249.1| putative outer membrane protein [Bacteroid... 32 8.8
ref|YP_680126.1| outer membrane protein [Cytophaga hutchins... 32 8.8
ref|YP_557393.1| Filamentous haemagglutinin [Burkholderia x... 32 8.8
ref|YP_552437.1| Putative haemagglutinin [Burkholderia xeno... 32 8.8
ref|YP_294319.1| Filamentous haemagglutinin, N-terminal:Adh... 32 8.8
ref|NP_939946.1| Putative penicillin-binding (cell division... 32 8.8
>ref|NP_045689.1| outer surface protein B (ospB) [Borrelia burgdorferi B31]
Length = 296
Score = 528 bits (1359), Expect = e-149
Identities = 277/279 (99%), Positives = 277/279 (99%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY 77
QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY
Sbjct: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY 77
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK
Sbjct: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
VTKKQGSIT ETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV
Sbjct: 138 VTKKQGSITXETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
GKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD
Sbjct: 198 GGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
Query: 258 LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK
Sbjct: 258 LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
>ref|YP_853838.1| outer surface protein B [Borrelia afzelii PKo]
Length = 299
Score = 363 bits (932), Expect = 2e-99
Identities = 190/282 (67%), Positives = 234/282 (82%), Gaps = 4/282 (1%)
Query: 18 QKGAESIG-SQKENDLNLEDSSKKSHQNAKQDLPAVTED-SVSLFNGNKIFVSKEKNSSG 75
QKG E SQ ND + +S + +++K+DL + E+ SV LFNGNKIFVSKEKNS+G
Sbjct: 19 QKGTEPKSTSQDHNDQEIINSDN-TPKDSKKDLTVLAEENSVPLFNGNKIFVSKEKNSAG 77
Query: 76 KYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS 135
KY+LRAT+D VELKG SDKNNGSG LEG+K DK+KV +T++ DLNT+T+E +DASN+K
Sbjct: 78 KYELRATVDTVELKGVSDKNNGSGKLEGTKADKTKVAMTIADDLNTITVETYDASNKKTG 137
Query: 136 SKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGS 195
S+V KKQGS+ +E+ KANKLDSKK+TR N TTLEYS++TD+ NATKAVETLKN IKLEGS
Sbjct: 138 SEVVKKQGSVIKESYKANKLDSKKITRENETTLEYSEMTDSSNATKAVETLKNGIKLEGS 197
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND-TAGSNKKTGKWEDSTSTLTISADSKK 254
LV GKTTV++ EGT+TL REIE+DGKVK++LND T+GS KKT W ++T+TLTISADSKK
Sbjct: 198 LVGGKTTVKLTEGTITLTREIEQDGKVKIYLNDTTSGSTKKTATWNETTNTLTISADSKK 257
Query: 255 TKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
TKD VFLTDGTITVQ Y+TAGT LEG++SEIK+L+ LK ALK
Sbjct: 258 TKDFVFLTDGTITVQAYDTAGTKLEGNSSEIKDLAALKAALK 299
>ref|YP_063284.1| outer surface protein B [Borrelia garinii PBi]
Length = 294
Score = 360 bits (925), Expect = 1e-98
Identities = 185/280 (66%), Positives = 227/280 (81%), Gaps = 5/280 (1%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY 77
QKGAE K ND +EDS K N+K+DLP VTED+V LFN N+IF+SKEKN KY
Sbjct: 19 QKGAEP----KHNDQEVEDSKKDQKDNSKRDLPLVTEDTVKLFNNNEIFISKEKNKDDKY 74
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
+LR+ +D+VELKG S+KN G+G LEG K DKSKV + VS DLNTVT+E +D +N+K+ S+
Sbjct: 75 ELRSIVDKVELKGLSEKNTGAGKLEGLKADKSKVTMLVSDDLNTVTIETYDTNNRKVLSQ 134
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
V KKQGS+TEET KA KL +KK+TRSN TT+EY+++TDADNA+KAVETLKN I LEGSLV
Sbjct: 135 VAKKQGSLTEETYKAGKLSAKKITRSNDTTIEYTEMTDADNASKAVETLKNGITLEGSLV 194
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLND-TAGSNKKTGKWEDSTSTLTISADSKKTK 256
GKTT+ IKEGTVTLK+EIEK G VK+FL+D T+G+ KKT W D+++TLT+SADSKK K
Sbjct: 195 GGKTTLTIKEGTVTLKKEIEKAGTVKLFLDDTTSGTTKKTAVWNDTSNTLTVSADSKKIK 254
Query: 257 DLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
D VFLTDGTITVQ Y+TAGT+LEG A+EIK+L+ LK ALK
Sbjct: 255 DFVFLTDGTITVQNYDTAGTTLEGKATEIKDLTALKAALK 294
>ref|NP_045688.1| outer surface protein A (ospA) [Borrelia burgdorferi B31]
Length = 273
Score = 243 bits (619), Expect = 3e-63
Identities = 142/258 (55%), Positives = 176/258 (68%), Gaps = 9/258 (3%)
Query: 46 KQDLPAVTED---SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE 102
KQ++ ++ E SV L K+ VSKEKN GKYDL AT+D++ELKGTSDKNNGSG LE
Sbjct: 18 KQNVSSLDEKNSVSVDLPGEMKVLVSKEKNKDGKYDLIATVDKLELKGTSDKNNGSGVLE 77
Query: 103 GSKPDKSKVKLTVSADLNTVTLEAFDASNQK-ISSKVTKKQGSITEETL-KANKLDSKKL 160
G K DKSKVKLT+S DL TLE F + +S KVT K S TEE + ++ K +
Sbjct: 78 GVKADKSKVKLTISDDLGQTTLEVFKEDGKTLVSKKVTSKDKSSTEEKFNEKGEVSEKII 137
Query: 161 TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDG 220
TR++GT LEY+ I +D + KA E LK + LEG+L KTT+ +KEGTVTL + I K G
Sbjct: 138 TRADGTRLEYTGI-KSDGSGKAKEVLKGYV-LEGTLTAEKTTLVVKEGTVTLSKNISKSG 195
Query: 221 KVKVFLNDT--AGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSL 278
+V V LNDT + + KKT W TSTLTI+ +SKKTKDLVF + TITVQQY++ GT L
Sbjct: 196 EVSVELNDTDSSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTKENTITVQQYDSNGTKL 255
Query: 279 EGSASEIKNLSELKNALK 296
EGSA EI L E+KNALK
Sbjct: 256 EGSAVEITKLDEIKNALK 273
>ref|YP_853837.1| outer surface protein A [Borrelia afzelii PKo]
Length = 273
Score = 238 bits (606), Expect = 1e-61
Identities = 136/258 (52%), Positives = 177/258 (68%), Gaps = 9/258 (3%)
Query: 46 KQDLPAVTED---SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE 102
KQ++ ++ E SV L K+ VSKEK+ GKY L+AT+D++ELKGTSDK+NGSG LE
Sbjct: 18 KQNVSSLDEKNSASVDLPGEMKVLVSKEKDKDGKYSLKATVDKIELKGTSDKDNGSGVLE 77
Query: 103 GSKPDKSKVKLTVSADLNTVTLEAFDASNQK-ISSKVTKKQGSITEETL-KANKLDSKKL 160
G+K DKSK KLT++ DL+ T E F + +S KV+ K + T+E + +L +K +
Sbjct: 78 GTKDDKSKAKLTIADDLSKTTFELFKEDGKTLVSRKVSSKDKTSTDEMFNEKGELSAKTM 137
Query: 161 TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDG 220
TR NGT LEY+++ +D KA E LKN LEG + K T+E+KEGTVTL +EI K G
Sbjct: 138 TRENGTKLEYTEM-KSDGTGKAKEVLKN-FTLEGKVANDKVTLEVKEGTVTLSKEIAKSG 195
Query: 221 KVKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSL 278
+V V LND T + KKTG W+ TSTLTIS +SKKT LVF TITVQ+Y++AGT+L
Sbjct: 196 EVTVALNDTNTTQATKKTGAWDSKTSTLTISVNSKKTTQLVFTKQDTITVQKYDSAGTNL 255
Query: 279 EGSASEIKNLSELKNALK 296
EG+A EIK L ELKNALK
Sbjct: 256 EGTAVEIKTLDELKNALK 273
>ref|YP_063283.1| outer surface protein A [Borrelia garinii PBi]
Length = 273
Score = 235 bits (600), Expect = 5e-61
Identities = 135/258 (52%), Positives = 176/258 (68%), Gaps = 9/258 (3%)
Query: 46 KQDLPAVTED---SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE 102
KQ++ ++ E SV L K+ VSKEK+ GKY L AT+D++ELKGTSDK+NGSGTLE
Sbjct: 18 KQNVSSLDEKNSVSVDLPGEMKVLVSKEKDKDGKYSLMATVDKLELKGTSDKSNGSGTLE 77
Query: 103 GSKPDKSKVKLTVSADLNTVTLEAFDASNQK-ISSKVTKKQGSITEETLKA-NKLDSKKL 160
G K DKSK KLT+S DL+ T E F + +S KV K S EE A +L K +
Sbjct: 78 GEKSDKSKAKLTISEDLSKTTFEIFKEDGKTLVSKKVNSKDKSSIEEKFNAKGELSEKTI 137
Query: 161 TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDG 220
R+NGT LEY++I +D KA E LK+ LEG+L KTT+++ EGTV L + I G
Sbjct: 138 LRANGTRLEYTEI-KSDGTGKAKEVLKD-FALEGTLAADKTTLKVTEGTVVLSKHIPNSG 195
Query: 221 KVKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSL 278
++ V LND + + KKTGKW+ +TSTLTIS +SKKTK++VF + TITVQ+Y++AGT+L
Sbjct: 196 EITVELNDSNSTQATKKTGKWDSNTSTLTISVNSKKTKNIVFTKEDTITVQKYDSAGTNL 255
Query: 279 EGSASEIKNLSELKNALK 296
EG+A EIK L ELKNALK
Sbjct: 256 EGNAVEIKTLDELKNALK 273
>ref|NP_765804.1| streptococcal hemagglutinin protein [Staphylococcus epidermidis ATCC
12228]
Length = 2310
Score = 51.2 bits (121), Expect = 2e-05
Identities = 69/296 (23%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQD---------LPAVTEDSVSLFNGNKIFVSKEKNS 73
S+ + N +L DS K S + ++ L A T +S S+ + SK+ +
Sbjct: 803 SVSTSISNSTSLSDSVKASQSLSTKESTSKSLSGSLSASTSNSTSIQASESVSTSKKLSE 862
Query: 74 SGKYDLR--ATIDQVELKGTSDK--------NNGSGTLEGSKPDKSKVKLTVSADLNTVT 123
S + A+I E TS K + S +++ S+ + KL+ SA +T
Sbjct: 863 SASTSMSDSASIKASESASTSKKLSESASTSTSDSASIKASESASTSKKLSESASTSTSD 922
Query: 124 LEAFDASNQKISSKVTKKQGSIT---EETLKANKL--DSKKLTRSNGTTLEYSQITDADN 178
+ AS +SK + S + ++KA++ SKKL+ S T+ T
Sbjct: 923 SASTQASESASTSKKLSESASTSMSDSASIKASESASTSKKLSESASTS------TSDSA 976
Query: 179 ATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK 238
+T+A E+ S KL S T+ + T E + + + T+ S ++
Sbjct: 977 STQASESASTSKKLSES-----TSTSTSDSASTSTSESDSTSESTSLSDSTSASLSESTS 1031
Query: 239 WEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNA 294
S S T +++S L++ T T +T+ TS SAS ++S+ +A
Sbjct: 1032 TSTSDSASTSTSESDSNSTSTSLSESTSTSLSESTS-TSTSDSASTSASVSDSNSA 1086
Score = 45.4 bits (106), Expect = 0.001
Identities = 51/224 (22%), Positives = 91/224 (40%), Gaps = 22/224 (9%)
Query: 82 TIDQVELKGTSDKNNGSGTLEGSKPDKSK---VKLTVSADLNTVTLEAFDASNQKISSKV 138
TI + G + +G +G K D S V NT+T+E+ DAS K ++K
Sbjct: 724 TITATDNSGKVVTHTVTGLPQGLKFDASTNSIVGTPTQIGTNTITIESTDASGNKTTTK- 782
Query: 139 TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETL----KNSIKLEG 194
I E + + DS + N + S T ++ KA ++L S L G
Sbjct: 783 ------INYEVTRNSASDSTSTSIVNSVSTSISNSTSLSDSVKASQSLSTKESTSKSLSG 836
Query: 195 SL---VVGKTTVEIKEGTVTLKREIEK-----DGKVKVFLNDTAGSNKKTGKWEDSTSTL 246
SL T+++ E T K+ E + +++A ++KK + ++++
Sbjct: 837 SLSASTSNSTSIQASESVSTSKKLSESASTSMSDSASIKASESASTSKKLSESASTSTSD 896
Query: 247 TISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
+ S + ++ + + ++A T SAS K LSE
Sbjct: 897 SASIKASESASTSKKLSESASTSTSDSASTQASESASTSKKLSE 940
Score = 37.7 bits (86), Expect = 0.21
Identities = 55/287 (19%), Positives = 114/287 (39%), Gaps = 20/287 (6%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTED---SVSLFNGNKIFVSKEKNSSGKYDL 79
S + ++ DS+ S ++ +V++ S SL +S + S+ D
Sbjct: 1231 STSLSESTSTSVSDSTSTSTSDSASTSTSVSDSNSASTSLSESTSTSIS-DSTSTSTSDS 1289
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS---NQKISS 136
+T V + +S + S +L S D + + SA +T ++ AS ++ S+
Sbjct: 1290 ASTSTSVS-ESSSTSTSISESLSTSDSDSKSMSTSESASTSTSVSDSESASTSISESTST 1348
Query: 137 KVTKKQGSITEETLKANKLDSKK------LTRSNGTTLEYSQITDADNATKAVETLKNSI 190
++ + T ++ A+ +S ++ S T++ S T ++ ++ +S
Sbjct: 1349 SLSDSTSTSTSDSTSASTSESDSNSTSTSMSESLSTSVSDSTSTSTSDSASTSTSVSDSN 1408
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND---TAGSNKKTGKWEDSTSTLT 247
SL +T + + + L++ T+ S+ + DSTST T
Sbjct: 1409 SASTSLSDSTSTSISDSTSASTSTSVSDSNSASTSLSESTSTSLSDSTSVSTSDSTSTST 1468
Query: 248 ISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNA 294
+DS T + +I+ ++ TS SAS + S+ +A
Sbjct: 1469 SESDSNSTSTSL---SESISTSLSDSTSTSTSDSASTSASESDSNSA 1512
>ref|YP_803612.1| Subtilisin-like serine protease [Pediococcus pentosaceus ATCC
25745]
Length = 2334
Score = 51.2 bits (121), Expect = 2e-05
Identities = 73/315 (23%), Positives = 134/315 (42%), Gaps = 43/315 (13%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVS-----LFNGNK---------IF 66
++SI + K N + S S +K D ++T DS+S +G+K I
Sbjct: 555 SQSISTSKSNSASASGSVSDSVSKSKSD--SITSDSISNSISTSVSGSKSTSDSASQSIS 612
Query: 67 VSKEKNSSGKYDL---RATIDQVELKGTSDKN---NGSGTLEGSKPDKSKVKLTVSADLN 120
SK ++SG + ++ D V ++ K+ +GS ++ SK + ++SA +
Sbjct: 613 TSKSTSTSGSTSVSNSKSMSDSVSQSISTSKSTSTSGSTSVSNSKSTSDSLSQSISASKS 672
Query: 121 TVTLEAFDASNQKIS------------SKVTKKQGSITEET--LKANKLDSKKLTRSNGT 166
T T + SN K + S T GS+++ K++ + S ++ S T
Sbjct: 673 TSTSGSTSVSNSKSTSDSVSQSISTSKSDSTSASGSVSDSVSKSKSDSITSDSISNSIST 732
Query: 167 TLEYSQITDADNATKAVETLKNSIKLEGSLVVG---KTTVEIKEGTVTLKRE-IEKDGKV 222
++ S+ T +D+ ++++ T K S GS V T+ + + T K + I D
Sbjct: 733 SVSGSKST-SDSVSQSISTSK-STSTSGSTSVSNSKSTSDSVSQSISTSKSDSITSDSIS 790
Query: 223 KVFLNDTAGSNKKTGKWEDSTSTLTISADSK-KTKDLVFLTDGTITVQQYNTAGTSLEGS 281
+ S + DS ST ++DSK K++ T + ++ N+ TS S
Sbjct: 791 DSISTSISDSTSTSHSTSDSVSTSNSNSDSKSKSESRSTSTSISDSISDSNSKSTSESRS 850
Query: 282 ASEIKNLSELKNALK 296
S + S+ +A K
Sbjct: 851 TSTSSSDSKSDSASK 865
Score = 49.7 bits (117), Expect = 5e-05
Identities = 66/285 (23%), Positives = 117/285 (41%), Gaps = 39/285 (13%)
Query: 21 AESIGSQKEND---LNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY 77
++SI S +D ++ DS+ SH T DSVS N N SK ++ S
Sbjct: 781 SDSITSDSISDSISTSISDSTSTSHS---------TSDSVSTSNSNSDSKSKSESRSTST 831
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKS----KVKLTVSADLNTVTLEAFDASNQK 133
+ +I K TS+ + S + SK D + + + S N+++ E+ SN
Sbjct: 832 SISDSISDSNSKSTSESRSTSTSSSDSKSDSASKSDSISKSDSITSNSIS-ESISTSNSD 890
Query: 134 ISSKVTKKQGSITEETLKA-----NKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
SSK K S + T + + +SK + S T+ S T ++T + +
Sbjct: 891 SSSKSDSKSTSESRSTSTSVSDSISDSNSKSTSESRSTSTSVSDST--SDSTSTSHSTSD 948
Query: 189 SIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTI 248
S+ S K+T E + + ++ D K +D+A + K DS ++ +I
Sbjct: 949 SVSTSNSDSNSKSTSESRSTSTSI-----SDSK-----SDSASKSDSVSK-SDSITSNSI 997
Query: 249 SADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
S +K + ++ +A TS+ S S+ + S K+
Sbjct: 998 SESISTSKS----DSSSKSMSDSRSASTSVSDSTSDSASTSHSKS 1038
Score = 45.4 bits (106), Expect = 0.001
Identities = 65/309 (21%), Positives = 120/309 (38%), Gaps = 42/309 (13%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S + ++ DS+ S + T DSVS N + S + S +
Sbjct: 1405 SKSTSDSRSTSTSVSDSTSDSVSTSHS-----TSDSVSTSNSDSDSKSASDSRSTSTSVS 1459
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNT----------------VTL 124
+I K TSD + S ++ S D + + S ++T T
Sbjct: 1460 NSISDSNSKSTSDSRSTSTSVSDSTSDSASTSHSTSDSVSTSNSDSDSKSTSDSRSASTS 1519
Query: 125 EAFDASNQKISSKVTKKQGSITEETL----------KANKLDSKKLTRSNGTTLEYSQIT 174
+ S+ + S T K SIT ++ ++K DSK ++ S T+ S T
Sbjct: 1520 VSDSKSDSESKSDSTSKSDSITSNSISESISTSNSDSSSKSDSKSISDSRSTSTSVSDST 1579
Query: 175 DADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND---TAG 231
+D+A+ + T +S+ S K+ E + + ++ +D T+
Sbjct: 1580 -SDSASTSHST-SDSVSTSNSDSDSKSMSESRSTSTSVSDSTSDSASTSHSTSDSVSTSK 1637
Query: 232 SNKKTGKWEDSTSTLTISADSK----KTKDLVFLTDG--TITVQQYNTAGTSLEGSASEI 285
S+ + DS ST T +DSK D + +D + ++ + + S S S+
Sbjct: 1638 SDSSSKSTSDSRSTSTSISDSKSDSASKSDSISKSDSITSNSISESISTSKSDSSSKSDS 1697
Query: 286 KNLSELKNA 294
K+ SE ++A
Sbjct: 1698 KSTSESRSA 1706
Score = 43.1 bits (100), Expect = 0.005
Identities = 51/249 (20%), Positives = 95/249 (38%), Gaps = 19/249 (7%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPA-----------VTEDSVSLFNGNKIFVSK 69
+ESI + K + + DS S + + T DSVS N + S
Sbjct: 1681 SESISTSKSDSSSKSDSKSTSESRSASTSVSDSTSDSISTSHSTSDSVSTSNSDSSSKSD 1740
Query: 70 EKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDA 129
K++S ++ TS ++ S ++ S D S + S +T ++
Sbjct: 1741 SKSTSESRSASTSVSDSTSDSTSTSHSTSDSVSTSNSDSSSKSASDSRSTSTSVSDSISD 1800
Query: 130 SNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
SN K +S S+++ T DS + S ++ S +D+D+ + + ++ S
Sbjct: 1801 SNSKSTSDSRSASTSVSDST-----SDSTSTSHSTSDSVSTSN-SDSDSKSMS-DSRSTS 1853
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDT-AGSNKKTGKWEDSTSTLTI 248
+ S +T +V+ V +D+ + S + DSTST
Sbjct: 1854 TSISDSTSDSTSTSHSTSDSVSTSNSDSSSKSDSVSTSDSRSASTSVSDSTSDSTSTSHS 1913
Query: 249 SADSKKTKD 257
++DS T +
Sbjct: 1914 TSDSVSTSN 1922
Score = 42.7 bits (99), Expect = 0.007
Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 13/226 (5%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKN 95
DS+ SH T DSVS N + S + S + +I K TSD
Sbjct: 1760 DSTSTSHS---------TSDSVSTSNSDSSSKSASDSRSTSTSVSDSISDSNSKSTSDSR 1810
Query: 96 NGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKL 155
+ S ++ S D + + S ++T ++ S S T S ++ T ++
Sbjct: 1811 SASTSVSDSTSDSTSTSHSTSDSVSTSNSDSDSKSMSDSRSTSTSISDSTSDSTSTSHST 1870
Query: 156 DSKKLTRSNGTTLEYSQITDADN---ATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
T ++ ++ + ++ +D+ +T ++ +S S +T + +
Sbjct: 1871 SDSVSTSNSDSSSKSDSVSTSDSRSASTSVSDSTSDSTSTSHSTSDSVSTSNSDSSSKSD 1930
Query: 213 KREIEKDGKVKVFLND-TAGSNKKTGKWEDSTSTLTISADSKKTKD 257
+ ++D T+ S + DS ST +DSK D
Sbjct: 1931 SKSASDSRSTSTSVSDSTSNSTSASHSTSDSVSTSNSDSDSKSMSD 1976
Score = 42.0 bits (97), Expect = 0.011
Identities = 58/283 (20%), Positives = 111/283 (39%), Gaps = 25/283 (8%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S + ++ DS+ S + T DSVS N + S + S +
Sbjct: 1343 SKSTSDSRSTSTSVSDSTSDSVSTSHS-----TSDSVSTSNSDSDSKSASDSRSTSTSVS 1397
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
+I K TSD + S ++ S D + S ++T ++ S S T
Sbjct: 1398 NSISDSNSKSTSDSRSTSTSVSDSTSDSVSTSHSTSDSVSTSNSDSDSKSASDSRSTSTS 1457
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
SI++ +SK + S T+ S T +D+A+ + T +S+ S K
Sbjct: 1458 VSNSISDS-------NSKSTSDSRSTSTSVSDST-SDSASTSHST-SDSVSTSNSDSDSK 1508
Query: 201 TTVEIKEGTVTLKREIEKDGKVK---VFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
+T + + + ++ + + D + K +D+ SN + S S + +DSK D
Sbjct: 1509 STSDSRSASTSVS-DSKSDSESKSDSTSKSDSITSNSISESISTSNSDSSSKSDSKSISD 1567
Query: 258 -------LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
+ T + + + S S S+ K++SE ++
Sbjct: 1568 SRSTSTSVSDSTSDSASTSHSTSDSVSTSNSDSDSKSMSESRS 1610
Score = 41.2 bits (95), Expect = 0.019
Identities = 58/287 (20%), Positives = 104/287 (36%), Gaps = 21/287 (7%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAV---TEDSVSLFNGNKIFVSKEKNSSGKY 77
++SI + S+ S ++K D + T DSVS N + S ++S
Sbjct: 1174 SDSISDSNSKSTSDSRSTSTSVSDSKSDSASTSHSTSDSVSTSNSDSSSKSDSVSTSDSR 1233
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
+I S ++ S ++ S D + S +T ++ S K S
Sbjct: 1234 STSTSISDSTSDSASTSHSTSDSVSTSNSDSDSKSTSDSRSASTSVSDSKSDSASKSDS- 1292
Query: 138 VTKKQGSITEETL----------KANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLK 187
T K SIT ++ ++K DSK + S T+ S N+ ++
Sbjct: 1293 -TSKSDSITSNSISESISTSNSDSSSKSDSKSTSDSRSTSTSVSNSISDSNSKSTSDSRS 1351
Query: 188 NSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLT 247
S + S +T +V+ D K + + S + DS S T
Sbjct: 1352 TSTSVSDSTSDSVSTSHSTSDSVSTS---NSDSDSKSASDSRSTSTSVSNSISDSNSKST 1408
Query: 248 ISADSKKTKDLVF-LTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
+DS+ T V T +++ + S S S+ K+ S+ ++
Sbjct: 1409 --SDSRSTSTSVSDSTSDSVSTSHSTSDSVSTSNSDSDSKSASDSRS 1453
Score = 38.1 bits (87), Expect = 0.16
Identities = 56/283 (19%), Positives = 101/283 (35%), Gaps = 55/283 (19%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTE-------------DSVSLFNGNKIFV 67
+ESI + K DSS KS +++ +V++ DSVS N +
Sbjct: 998 SESISTSKS------DSSSKSMSDSRSASTSVSDSTSDSASTSHSKSDSVSTSNSDSSSK 1051
Query: 68 SKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDK-----------SKVKLTVS 116
S ++S ++ K SD + S ++ SK D S ++S
Sbjct: 1052 SDSVSTSDSRSTSTSVSDSISKSMSDSRSTSTSVSDSKSDSESKSDSISKSDSITSNSIS 1111
Query: 117 ADLNTVTLEAFDASNQKISSKV--------------------TKKQGSITEETLKAN--K 154
++T ++ SN K +S K SIT +++ +
Sbjct: 1112 ESISTSNSDSISDSNSKSTSDSRSTSTSISDSKSDSASKSDSVSKSDSITSDSISESIST 1171
Query: 155 LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKR 214
+S ++ SN + S+ T + ++ S S+ + K +V+
Sbjct: 1172 SNSDSISDSNSKSTSDSRSTSTSVSDSKSDSASTSHSTSDSVSTSNSDSSSKSDSVSTSD 1231
Query: 215 EIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
+ +D+A ++ T DS ST +DSK T D
Sbjct: 1232 SRSTSTSISDSTSDSASTSHSTS---DSVSTSNSDSDSKSTSD 1271
Score = 36.6 bits (83), Expect = 0.47
Identities = 42/248 (16%), Positives = 91/248 (36%), Gaps = 14/248 (5%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKN 95
DS+ SH T DSVS N + S K++S ++ TS +
Sbjct: 1906 DSTSTSHS---------TSDSVSTSNSDSSSKSDSKSASDSRSTSTSVSDSTSNSTSASH 1956
Query: 96 NGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKL 155
+ S ++ S D + +D + + D+++ S+ + T + ++K
Sbjct: 1957 STSDSVSTSNSDSDSKSM---SDSRSTSTSISDSTSDSTSTSHSTSDSVSTSNSDSSSKS 2013
Query: 156 DSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKRE 215
DS + S + S T +D+A+ + T +S+ S K+ + + +
Sbjct: 2014 DSVSTSDSRSASTSVSDST-SDSASTSHST-SDSVSTSNSDSSSKSDSKSASDSRSTSTS 2071
Query: 216 IEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAG 275
+ + + + T + S+ + +IS ++ +++ +
Sbjct: 2072 VSDSTSNSTSASHSTSDSVSTSNSDSSSKSDSISTSESRSASTSVSDSTSVSTSDSRSTS 2131
Query: 276 TSLEGSAS 283
TS+ S S
Sbjct: 2132 TSISDSTS 2139
>ref|YP_189831.1| serine threonine rich antigen [Staphylococcus epidermidis RP62A]
Length = 1870
Score = 49.7 bits (117), Expect = 5e-05
Identities = 63/277 (22%), Positives = 115/277 (41%), Gaps = 24/277 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+ + N +L DS K S + T++S S + S ++S K A+
Sbjct: 803 SVSTSISNSTSLSDSVKASQSLS-------TKESTSKSLSGSLSASTSNSASIKASESAS 855
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ + S + S +++ S+ + KL+ SA +T + AS +SK +
Sbjct: 856 TSKKLSESASTSMSDSASIKASESASTSKKLSESASTSTSDSASIKASESASTSKKLSES 915
Query: 143 GSITEE---TLKANKL--DSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
S + ++KA++ SKKL+ S T+ T +T+A E+ S KL S
Sbjct: 916 ASTSMSDSVSIKASESASTSKKLSESASTS------TSDSASTQASESASTSKKLSES-- 967
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
T+ + T E + + + T+ S ++ S S T +++S
Sbjct: 968 ---TSTSTSDSASTSTSESDSTSESTSLSDSTSASLSESTSTSTSDSASTSTSESDSNST 1024
Query: 258 LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNA 294
L++ T T +T+ TS SAS ++S+ +A
Sbjct: 1025 STSLSESTSTSLSESTS-TSTSDSASTSASVSDSNSA 1060
Score = 45.1 bits (105), Expect = 0.001
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 21/251 (8%)
Query: 35 EDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKE--KNSSGKYDLRATIDQVELKGTS 92
E S + + + L DS S + S ++S L + TS
Sbjct: 1368 ESDSNSTSTSMSESLSTSVSDSTSTSTSDSASTSTSVSDSNSASTSLSDSTSTSISDSTS 1427
Query: 93 DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKA 152
+ S + S+ + + +VS +T ++ S + +S T + S +E T +
Sbjct: 1428 ASTSDSASESASESESTSESTSVSESSSTSVSDSTSTSTSESASTSTSESESTSESTSVS 1487
Query: 153 NKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
+S + S+ T+ S+ A +T E+ S L GS ++ + + T T
Sbjct: 1488 ---ESSSTSVSDSTSTSTSE--SASTSTSESESTSESTSLSGS-----SSTSVSDSTSTS 1537
Query: 213 KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYN 272
E N T+ S ++ S ST T ++DS T + +V N
Sbjct: 1538 TSESASTSTSVSDSNSTSTSLSESTSTSLSNSTSTSTSDSAST---------STSVSDSN 1588
Query: 273 TAGTSLEGSAS 283
+A TSL GS S
Sbjct: 1589 SASTSLSGSLS 1599
Score = 39.7 bits (91), Expect = 0.055
Identities = 48/224 (21%), Positives = 88/224 (39%), Gaps = 22/224 (9%)
Query: 82 TIDQVELKGTSDKNNGSGTLEGSKPDKSK---VKLTVSADLNTVTLEAFDASNQKISSKV 138
TI + G + +G +G K D S V NT+T+E+ DAS K ++K
Sbjct: 724 TITATDNSGKVVTHTVTGLPQGLKFDASTNSIVGTPTQIGTNTITIESTDASGNKTTTK- 782
Query: 139 TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETL----KNSIKLEG 194
I E + + DS + N + S T ++ KA ++L S L G
Sbjct: 783 ------INYEVTRNSASDSTSTSIVNSVSTSISNSTSLSDSVKASQSLSTKESTSKSLSG 836
Query: 195 SL---VVGKTTVEIKEGTVTLKREIEK-----DGKVKVFLNDTAGSNKKTGKWEDSTSTL 246
SL +++ E T K+ E + +++A ++KK + ++++
Sbjct: 837 SLSASTSNSASIKASESASTSKKLSESASTSMSDSASIKASESASTSKKLSESASTSTSD 896
Query: 247 TISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
+ S + ++ + + ++ SAS K LSE
Sbjct: 897 SASIKASESASTSKKLSESASTSMSDSVSIKASESASTSKKLSE 940
>ref|YP_813674.1| Surface antigen [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 338
Score = 48.9 bits (115), Expect = 9e-05
Identities = 57/242 (23%), Positives = 89/242 (36%), Gaps = 15/242 (6%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVS--LFNGNKIFVSKEKNSSGK 76
K + S + K + SSKK+ + + + + V+ K K ++ K
Sbjct: 58 KASSSSEASKSSSSAASSSSKKAAEKSTKKAAKKSTKKVAKKATKNTKKTTKKAAKTTKK 117
Query: 77 YDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISS 136
+A D + T+ K+ K K+ K T A NT + K ++
Sbjct: 118 STKKAAKDTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAA 177
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
K TKK T+++ K ++KK + T + S A N KA +T K S K
Sbjct: 178 KNTKKAAKTTKKSTKKAAKNTKKAAK----TTKKSTKKAAKNTKKAAKTAKKSTK----- 228
Query: 197 VVGKTTVEIKEGTVTLKREIEKDGK-VKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT 255
K K+ T K+ +K K K T S KK K + T + K
Sbjct: 229 ---KAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAA 285
Query: 256 KD 257
KD
Sbjct: 286 KD 287
Score = 45.4 bits (106), Expect = 0.001
Identities = 69/281 (24%), Positives = 97/281 (34%), Gaps = 37/281 (13%)
Query: 28 KENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVE 87
K N E SSKK+ + + +E S S + K S K + + +V
Sbjct: 38 KSNKTAAESSSKKTSSSESSKASSSSEASKSSSSAASSSSKKAAEKSTKKAAKKSTKKVA 97
Query: 88 LKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ----G 143
K T KN T + +K K K A + K ++K TKK
Sbjct: 98 KKAT--KNTKKTTKKAAKTTKKSTKKA--------------AKDTKKAAKTTKKSTKKAA 141
Query: 144 SITEETLKANKLDSKKL---TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
T++ K K +KK T+ T + S A N KA +T K S K K
Sbjct: 142 KNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTK--------K 193
Query: 201 TTVEIKEGTVTLKREIEKDGK-----VKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT 255
K+ T K+ +K K K T + K T K +T T A +K T
Sbjct: 194 AAKNTKKAAKTTKKSTKKAAKNTKKAAKTAKKSTKKAAKNTKKAAKTTKKSTKKA-AKNT 252
Query: 256 KDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
K T + NT + S K + K A K
Sbjct: 253 KKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKDTKKAAK 293
Score = 35.4 bits (80), Expect = 1.0
Identities = 42/176 (23%), Positives = 62/176 (35%), Gaps = 10/176 (5%)
Query: 37 SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSS---GKYDLRATIDQVELKGTSD 93
S+KK+ +N K+ + + K K S+ K +A + +
Sbjct: 154 STKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAA 213
Query: 94 KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ----GSITEET 149
KN K K K T A T A N K ++K TKK T++
Sbjct: 214 KNTKKAAKTAKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKNTKKA 273
Query: 150 LKANKLDSKKL---TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
K K +KK T+ T + S A + KA +T K S K K+T
Sbjct: 274 AKTTKKSTKKAAKDTKKAAKTTKKSTKKAAKDTKKAAKTTKKSTKKAAKKASAKST 329
Score = 33.1 bits (74), Expect = 5.2
Identities = 32/149 (21%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Query: 37 SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNN 96
S+KK+ +N K+ + + K K S+ K A + + T+ K+
Sbjct: 190 STKKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTAKKSTKK----AAKNTKKAAKTTKKST 245
Query: 97 GSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLD 156
K K+ K T A NT + K ++K TKK T+++ K D
Sbjct: 246 KKAAKNTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKDTKKAAKTTKKSTKKAAKD 305
Query: 157 SKKLTRSNGTTLEYSQITDADNATKAVET 185
+KK ++ + + + + +T A T
Sbjct: 306 TKKAAKTTKKSTKKAAKKASAKSTSASST 334
>ref|YP_891655.1| surface array protein [Campylobacter fetus subsp. fetus 82-40]
Length = 1164
Score = 48.5 bits (114), Expect = 1e-04
Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 39/293 (13%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
KG +I + + +N D+S S + DL A +V +G+ FV K ++ D
Sbjct: 383 KGNANITLEVKAGVNSLDASASSGK-VSADLKAADVKTVKGGSGDDKFVVGTKVANVNVD 441
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKI---- 134
A D++E+ NG+GTL+ + + KV L + L A D S I
Sbjct: 442 GGAGNDELEI-------NGAGTLKPTVANVEKVTLDATGALTLAMDNAKDVSELNIKGDK 494
Query: 135 ------SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATK------A 182
+S ++ T E A +DS+ L T+ Y TDA A + A
Sbjct: 495 GAVTVVNSNISSLNFLSTAEGTNAVTIDSENL-----ATINYKAATDAKAAAEASGKVNA 549
Query: 183 VETLKNSIKLEGSLVVGKTTVEI---KEGTVTLK-REIEKDGKVKVFLNDTAGSNKKTGK 238
E +I LE + T E+ K ++TL E+++ +K+ N ++
Sbjct: 550 SEATNLTINLEANTKTTNTNAEVIAEKATSITLNVAEVKEAHDIKLSTPKATSLNVESKS 609
Query: 239 WEDSTSTLTISADSKKTKDLVFLTDG------TITVQQYNTAGTSLEGSASEI 285
+ T + D K ++L +TDG T++ +T S E + S++
Sbjct: 610 VGGTKITAVNATDLDKLQNLNVVTDGKFDIATAATLKGISTINLSGENAKSQV 662
>ref|YP_719446.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 4526
Score = 48.1 bits (113), Expect = 2e-04
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 29/206 (14%)
Query: 86 VELKGTSDKNNGSGTLEGSKPDKSKVKL-----TVSADLNTVT----LEAFDASNQKISS 136
VE K +D N + T+ ++ K+K++ ++D NTVT A + + ++++
Sbjct: 1341 VESKKDADGNKNTFTVSLNENIKTKIESIGTGKVEASDNNTVTGGKVYTAIEGAKSELNA 1400
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAV-ETLKNSIKLEGS 195
++ KK +T K+ +L+ K + + +T + N ++AV +TL N+IK+EGS
Sbjct: 1401 EIAKKLDKSIFDTAKS-ELEDKIDQKVDTSTFNAATFGLMGNDSQAVTKTLNNTIKIEGS 1459
Query: 196 ---------LVVGKTT----VEIKEG-TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWED 241
+ V K T +EIK G T+T + KD K K+ N+ T D
Sbjct: 1460 ESVESNKKNIYVSKNTAGDGLEIKLGETLTGITSVGKDDKAKISFGGDNAKNEITYTVGD 1519
Query: 242 STSTLTISADSKKTKDLVFLTDGTIT 267
+T+T T K +KD + L IT
Sbjct: 1520 TTATATF----KFSKDGIDLGSKKIT 1541
Score = 35.8 bits (81), Expect = 0.80
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 47/257 (18%)
Query: 30 NDLNLEDSSKKSHQNAKQDLPAV---TEDSVSLFNGNKIFVSKEKNSSGKY-DLRATIDQ 85
N+L L + + N K + V T+D+ ++ NK + N++ + D +T D
Sbjct: 1894 NELKLTLTGTGAGNNTKVKISGVANGTDDNDAI---NKSQLDSVGNATLTFSDGTSTNDF 1950
Query: 86 VELKGTSDK------NNGSGTLEGSKPDKSKVKLTVS-----ADLNTVTLEAFDASNQKI 134
V S K +N + TL+ +K + + + TVS D+N++TL++ ++
Sbjct: 1951 VRKNSDSKKVVISSGSNVTVTLDKTKDNNNTGQFTVSLNKDLTDINSITLKSNGGTDN-- 2008
Query: 135 SSKVTKKQGSITEETLKANKLD------SKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
K G IT +T K+ SK + S+ L+ S+ K + +
Sbjct: 2009 ---TNNKTGKITVDTTGDVKVQHGDGTASKIVVESDFNELKTSEEITVTGGGKVLGA-ET 2064
Query: 189 SIKLEGSLVVGKTTVEIKEGTVT-------LKREIEKDGKVKVFLNDTAGSNKKTGKW-- 239
++ L + + G ++K GT++ L ++ ++ KVKV DT S G
Sbjct: 2065 TLSLNDNSIAG---TKLKTGTISEDRLDSALTTKLNREFKVKV---DTTTSENLIGNTLE 2118
Query: 240 --EDSTSTLTISADSKK 254
+DS T+ + +D+KK
Sbjct: 2119 FAKDSNLTVVLDSDNKK 2135
Score = 33.1 bits (74), Expect = 5.2
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 27/198 (13%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETL 150
T+ S T + + V + + DL + F+ N ++ +T + + +++
Sbjct: 3518 TTTAGTASSTPSTTSNTTAVVTIGTTEDLTGLKSAEFNGDNGN-TTNITGNEIVLKDQSG 3576
Query: 151 KANK--LDSKKLTRSNGTTLEYSQITDADNATKAV----ETLKNSIKLEGSLVV-GKTTV 203
A+ S+ +T + E + +T A+ T +V + L N E +++ GK T
Sbjct: 3577 NAHTQTATSQIITDNTDPDTEKAVVTTAEGVTMSVVSDDQVLVNDQTAEANILSNGKNTT 3636
Query: 204 EIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKW-----------EDSTSTLTISADS 252
E+K G + +K +K G+ V L G + + GK + T T+ AD
Sbjct: 3637 EVKAGEIAIK---DKVGQNVVSLKVAEGEDGQDGKGATLAFAKGTDSKSGTGTIKGLADI 3693
Query: 253 KKTKDLVFLTDGTITVQQ 270
K + TDG++ V +
Sbjct: 3694 KPDE-----TDGSLAVNK 3706
>ref|YP_091336.1| Bpr [Bacillus licheniformis ATCC 14580]
Length = 1432
Score = 48.1 bits (113), Expect = 2e-04
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 35 EDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDK 94
+D + +NA + + +V LFNG++ + E + G + +++ E T+
Sbjct: 1161 KDGFITNQKNAVIEGTSSPNTTVHLFNGDEEAGTAETAADGTFSKEIPLNKGENVITAKS 1220
Query: 95 NNGSGTLEGSKP-----DKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET 149
++ SGT + S+P D+ K KLT+ S K++ + +G+++++
Sbjct: 1221 SSASGTTDASEPVRIVLDQKKPKLTIDT----------PESGSKLNKETVTVKGTVSDDH 1270
Query: 150 LKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVE 204
L++ ++ KK NG EYS DN KN IK+ S G T +
Sbjct: 1271 LESVHVNGKKAAVDNG---EYSARIMLDNG-------KNEIKVTASDAAGNKTTK 1315
>ref|YP_078924.1| bacillopeptidase F [Bacillus licheniformis ATCC 14580]
Length = 1432
Score = 48.1 bits (113), Expect = 2e-04
Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 35 EDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDK 94
+D + +NA + + +V LFNG++ + E + G + +++ E T+
Sbjct: 1161 KDGFITNQKNAVIEGTSSPNTTVHLFNGDEEAGTAETAADGTFSKEIPLNKGENVITAKS 1220
Query: 95 NNGSGTLEGSKP-----DKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET 149
++ SGT + S+P D+ K KLT+ S K++ + +G+++++
Sbjct: 1221 SSASGTTDASEPVRIVLDQKKPKLTIDT----------PESGSKLNKETVTVKGTVSDDH 1270
Query: 150 LKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVE 204
L++ ++ KK NG EYS DN KN IK+ S G T +
Sbjct: 1271 LESVHVNGKKAAVDNG---EYSARIMLDNG-------KNEIKVTASDAAGNKTTK 1315
>ref|YP_619616.1| hypothetical protein Ldb1963 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 280
Score = 46.6 bits (109), Expect = 5e-04
Identities = 57/237 (24%), Positives = 87/237 (36%), Gaps = 15/237 (6%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
K + S + K + SSKK+ + K A + + + K K ++ K
Sbjct: 58 KASSSSEASKSSSSAASSSSKKAAE--KSTKKAAKKSTKKVAKNTKKTTKKAAKTTKKST 115
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV 138
+A + + + K + K K+ K T A NT + K ++K
Sbjct: 116 KKAAKNTKKAAKDTKKVAKKAAKDTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKD 175
Query: 139 TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVV 198
TKK T+++ K D+KK + T + S A N KA +T K S K
Sbjct: 176 TKKAAKTTKKSTKKAAKDTKKAAK----TTKKSTKKAAKNTKKAAKTTKKSTK------- 224
Query: 199 GKTTVEIKEGTVTLKREIEKDGK-VKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
K K+ T K+ +K K K S KK K + ST S S K
Sbjct: 225 -KAAKNTKKAAKTTKKSTKKAAKNTKKAAKTAKKSTKKAAKKGSAKSTSASSTSSAK 280
Score = 38.5 bits (88), Expect = 0.12
Identities = 44/185 (23%), Positives = 69/185 (37%), Gaps = 25/185 (13%)
Query: 79 LRATIDQVELKGT-----SDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK 133
L AT ++ E+K S S + S+ + S+ ++ + +A + S +K
Sbjct: 28 LAATENKTEVKSNKTAAESSSKKTSSSESSKASSSSEASKSSSSAASSSSKKAAEKSTKK 87
Query: 134 ISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE 193
+ K TKK T++T K +KK T+ A N KA + K
Sbjct: 88 AAKKSTKKVAKNTKKTTKKAAKTTKKSTKK-----------AAKNTKKAAKDTKK----- 131
Query: 194 GSLVVGKTTVEIKEGTVTLKREIEKDGK-VKVFLNDTAGSNKKTGKWEDSTSTLTISADS 252
V K + K+ T K+ +K K K T S KK K + T +
Sbjct: 132 ---VAKKAAKDTKKAAKTTKKSTKKAAKNTKKAAKTTKKSTKKAAKDTKKAAKTTKKSTK 188
Query: 253 KKTKD 257
K KD
Sbjct: 189 KAAKD 193
>ref|YP_566858.1| hypothetical protein Mbur_2245 [Methanococcoides burtonii DSM 6242]
Length = 334
Score = 46.2 bits (108), Expect = 6e-04
Identities = 64/288 (22%), Positives = 124/288 (43%), Gaps = 36/288 (12%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQ------DLPAVTEDSVSLFNGNKIFVSKEKNSSG 75
ES+ S +E ++ D+ +S+++ K+ D+ + +S + + E N SG
Sbjct: 15 ESVESGEEGEMTGSDTKGESNESGKEGEVTESDMKGESVESGKEGEMTESEIKGESNGSG 74
Query: 76 KYDLRATIDQVELKGTSDKNNGSGTL-----EGSKPDKSKVKLTVSADLNTVTLEA---- 126
K + + E+KG S + G + +G K +D+ ++E+
Sbjct: 75 K---EGEMTESEIKGESKGSGKEGEMTESEIKGESKGSGKEGEVTESDMKGESVESGKEG 131
Query: 127 -FDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVET 185
S+ K SK + K+G +TE +K ++S K G+ + +++ + K E
Sbjct: 132 EMTGSDTKGESKGSGKEGEVTESDMKGESVESGKEGEMTGSDTK----GESNGSGKEGEM 187
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVT---LKREIEKDGKV-KVFLNDTAGSNKKTGKWED 241
++ IK G++ KEG +T +K E GK ++ +DT G + +GK +
Sbjct: 188 TESEIK-------GESNGSGKEGEMTESEIKGESNGSGKEGEMTGSDTKGESNGSGKEGE 240
Query: 242 STSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
T + I +S + +T+ T + N +G E + S+ K S
Sbjct: 241 MTES-EIKGESNGSGKEGEMTESD-TKGESNGSGKEGEMTGSDTKGES 286
>ref|YP_495223.1| LPXTG-motif cell wall surface anchor family protein [Staphylococcus
aureus subsp. aureus USA300]
Length = 2271
Score = 45.8 bits (107), Expect = 8e-04
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+ + +++ S S + + DS S + + +S+ + SG +T
Sbjct: 1020 SLSASDSKSMSVSSSMSTSQSGSTSES---LSDSQSTSDSDSKSLSQSTSQSGSTST-ST 1075
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKK 141
++ TS+ + SG++ S+ D + + S D + + A AS++ IS S T
Sbjct: 1076 STSASVR-TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSAFTST 1133
Query: 142 QGSI-TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
GS+ T +L + + + S+ T+L S+ +T +++ +I S
Sbjct: 1134 SGSVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASES----- 1188
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T + + E T E + FL+++ +STS T + S T +
Sbjct: 1189 TFISLSESNSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTS 1236
Query: 261 LTDGTITVQQYNTAGTSLEGSASEIKNLS 289
L+D T + + TSL S S ++S
Sbjct: 1237 LSDST---SESGSTSTSLSNSTSGSTSIS 1262
Score = 40.8 bits (94), Expect = 0.025
Identities = 61/276 (22%), Positives = 108/276 (39%), Gaps = 30/276 (10%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + SI +L DS+ + + A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA-VETLKNS 189
+I S GS++ K+ + S T +G+T E ++D+ + + + ++L S
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTSDSDSKSLSQS 1064
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG-SNKKTGKWEDSTSTLTI 248
GS +T +V G + +D+ S + DS S T
Sbjct: 1065 TSQSGSTSTSTST----SASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSASTA 1120
Query: 249 SADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASE 284
S++S ++ T G++ + TSL S SE
Sbjct: 1121 SSES-ISQSAFTSTSGSV------STSTSLSTSNSE 1149
Score = 38.1 bits (87), Expect = 0.16
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 40/276 (14%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ + ++ DS S N++ D S+S + + S + SG
Sbjct: 1876 SQSMSGSESTSTSVSDSQSSSTSNSQFD-----SMSISASESDSMSTSDSSSISGSNSTS 1930
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ TSD +GS ++ S + + S ++ T +++ +S +++
Sbjct: 1931 TSLS------TSDSMSGSVSVSTSTSLSDSISGSTSVSDSSST-----STSTSLSDSMSQ 1979
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
Q + T S L+ S T++ S T + +T +L S + S
Sbjct: 1980 SQSTSTSA--------SGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDS----- 2026
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T++ I T++ E D T+ S+ ++ DS ST T ++DS
Sbjct: 2027 TSISISGSQSTVESESTSD--------STSISDSESLSTSDSDSTSTSTSDSTSGSTSTS 2078
Query: 261 LTDGTITVQQYNTA---GTSLEGSASEIKNLSELKN 293
+++ T +T+ TS+ S S ++S+ K+
Sbjct: 2079 ISESLSTSGSGSTSVSDSTSMSESNSSSVSMSQDKS 2114
Score = 37.7 bits (86), Expect = 0.21
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 25/262 (9%)
Query: 26 SQKENDLN---LEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S E+DL+ L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDLSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|YP_718416.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 5143
Score = 45.4 bits (106), Expect = 0.001
Identities = 68/277 (24%), Positives = 113/277 (40%), Gaps = 20/277 (7%)
Query: 26 SQKENDLNLEDSSK---KSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNS---SGKYDL 79
S KE +++L D+ +N+ + T + G + ++K+ + SG D
Sbjct: 1787 SSKEIEISLSDTLTGITSIGKNSDNGITFNTNATTIKLGGVSLSLNKDNTAVKISGVADG 1846
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSAD---LNTVTLEAFDASNQKISS 136
+ T D V KG DK L G+ + +KLT +A + +TL D +KI +
Sbjct: 1847 KDTNDAVN-KGQLDKKQDK--LTGTITANNGIKLTGTAANSIASDITLSLEDGLKEKIDN 1903
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
++K T + A+ +++ T YS+ KA ET+ N + S
Sbjct: 1904 ALSKADAGNTYAKVDASNIENGNKASWRTTLDVYSKTEANAEIAKAKETVTNGDGITVSA 1963
Query: 197 VVGKTTVEIKEGTVTL----KREIEKDGKVKVFLND--TAGSNKKTGKWEDSTSTLTISA 250
T K TV L K +I G V ND T K ED+ +TLT +
Sbjct: 1964 TPDGTDGP-KTFTVALADEYKTKINSIGTGSVADNDKNTVTGGKVHTAIEDAKTTLTSTI 2022
Query: 251 DSKKTKDLVFLTD-GTITVQQYNTAGTSLEGSASEIK 286
+ K K+L + + G ++ T ++G E+K
Sbjct: 2023 NGKADKNLSNIDETGKAKIKTLATEAIDVQGKEGELK 2059
>ref|YP_187464.1| LPXTG cell wall surface anchor family protein [Staphylococcus aureus
subsp. aureus COL]
Length = 2261
Score = 45.4 bits (106), Expect = 0.001
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+ + +++ S S + + DS S + + +S+ + SG +T
Sbjct: 1020 SLSASDSKSMSVSSSMSTSQSGSTSES---LSDSQSTSDSDSKSLSQSTSQSGSTST-ST 1075
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKK 141
++ TS+ + SG++ S+ D + + S D + + A AS++ IS S T
Sbjct: 1076 STSASVR-TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTST 1133
Query: 142 QGSI-TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
GS+ T +L + + + S+ T+L S+ +T +++ +I S
Sbjct: 1134 SGSVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASES----- 1188
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T + + E T E + FL+++ +STS T + S T +
Sbjct: 1189 TFISLSESNSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTS 1236
Query: 261 LTDGTITVQQYNTAGTSLEGSASEIKNLS 289
L+D T + + TSL S S ++S
Sbjct: 1237 LSDST---SESGSTSTSLSNSTSGSTSIS 1262
Score = 40.8 bits (94), Expect = 0.025
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 38/280 (13%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + SI +L DS+ + + A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA-VETLKNS 189
+I S GS++ K+ + S T +G+T E ++D+ + + + ++L S
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTSDSDSKSLSQS 1064
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS 249
GS +T +V G + +D S + + DSTS
Sbjct: 1065 TSQSGSTSTSTST----SASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS----- 1112
Query: 250 ADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
DSK T + ++ Q +A TS GS S +LS
Sbjct: 1113 -DSKSAS-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 38.1 bits (87), Expect = 0.16
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 40/276 (14%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ + ++ DS S N++ D S+S + + S + SG
Sbjct: 1866 SQSMSGSESTSTSVSDSQSSSTSNSQFD-----SMSISASESDSMSTSDSSSISGSNSTS 1920
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ TSD +GS ++ S + + S ++ T +++ +S +++
Sbjct: 1921 TSLS------TSDSMSGSVSVSTSTSLSDSISGSTSVSDSSST-----STSTSLSDSMSQ 1969
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
Q + T S L+ S T++ S T + +T +L S + S
Sbjct: 1970 SQSTSTSA--------SGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDS----- 2016
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T++ I T++ E D T+ S+ ++ DS ST T ++DS
Sbjct: 2017 TSISISGSQSTVESESTSD--------STSISDSESLSTSDSDSTSTSTSDSTSGSTSTS 2068
Query: 261 LTDGTITVQQYNTA---GTSLEGSASEIKNLSELKN 293
+++ T +T+ TS+ S S ++S+ K+
Sbjct: 2069 ISESLSTSGSGSTSVSDSTSMSESNSSSVSMSQDKS 2104
Score = 37.7 bits (86), Expect = 0.21
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 25/262 (9%)
Query: 26 SQKENDLN---LEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S E+DL+ L DS+ S Q+++ D S S + + S S L +
Sbjct: 1508 SASESDLSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1562
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1563 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1613
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1614 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1670
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1671 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1726
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1727 DSGSLSVSTSLRKSESVSESSS 1748
>ref|YP_501439.1| hypothetical protein SAOUHSC_02990 [Staphylococcus aureus subsp.
aureus NCTC 8325]
Length = 2271
Score = 45.4 bits (106), Expect = 0.001
Identities = 57/269 (21%), Positives = 110/269 (40%), Gaps = 28/269 (10%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+ + +++ S S + + DS S + + +S+ + SG +T
Sbjct: 1020 SLSASDSKSMSVSSSMSTSQSGSTSES---LSDSQSTSDSDSKSLSQSTSQSGSTST-ST 1075
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKK 141
++ TS+ + SG++ S+ D + + S D + + A AS++ IS S T
Sbjct: 1076 STSASVR-TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTST 1133
Query: 142 QGSI-TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
GS+ T +L + + + S+ T+L S+ +T +++ +I S
Sbjct: 1134 SGSVSTSTSLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASES----- 1188
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T + + E T E + FL+++ +STS T + S T +
Sbjct: 1189 TFISLSESNSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTS 1236
Query: 261 LTDGTITVQQYNTAGTSLEGSASEIKNLS 289
L+D T + + TSL S S ++S
Sbjct: 1237 LSDST---SESGSTSTSLSNSTSGSTSIS 1262
Score = 40.8 bits (94), Expect = 0.025
Identities = 64/280 (22%), Positives = 109/280 (38%), Gaps = 38/280 (13%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + SI +L DS+ + + A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA-VETLKNS 189
+I S GS++ K+ + S T +G+T E ++D+ + + + ++L S
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTSDSDSKSLSQS 1064
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS 249
GS +T +V G + +D S + + DSTS
Sbjct: 1065 TSQSGSTSTSTST----SASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS----- 1112
Query: 250 ADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
DSK T + ++ Q +A TS GS S +LS
Sbjct: 1113 -DSKSAS-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 38.1 bits (87), Expect = 0.16
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 40/276 (14%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ + ++ DS S N++ D S+S + + S + SG
Sbjct: 1876 SQSMSGSESTSTSVSDSQSSSTSNSQFD-----SMSISASESDSMSTSDSSSISGSNSTS 1930
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ TSD +GS ++ S + + S ++ T +++ +S +++
Sbjct: 1931 TSLS------TSDSMSGSVSVSTSTSLSDSISGSTSVSDSSST-----STSTSLSDSMSQ 1979
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
Q + T S L+ S T++ S T + +T +L S + S
Sbjct: 1980 SQSTSTSA--------SGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDS----- 2026
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T++ I T++ E D T+ S+ ++ DS ST T ++DS
Sbjct: 2027 TSISISGSQSTVESESTSD--------STSISDSESLSTSDSDSTSTSTSDSTSGSTSTS 2078
Query: 261 LTDGTITVQQYNTA---GTSLEGSASEIKNLSELKN 293
+++ T +T+ TS+ S S ++S+ K+
Sbjct: 2079 ISESLSTSGSGSTSVSDSTSMSESNSSSVSMSQDKS 2114
Score = 37.7 bits (86), Expect = 0.21
Identities = 50/262 (19%), Positives = 102/262 (38%), Gaps = 25/262 (9%)
Query: 26 SQKENDLN---LEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S E+DL+ L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDLSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|ZP_00604835.1| Surface protein from Gram-positive cocci, anchor region
[Enterococcus faecium DO]
Length = 660
Score = 45.1 bits (105), Expect = 0.001
Identities = 47/227 (20%), Positives = 87/227 (38%), Gaps = 12/227 (5%)
Query: 52 VTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKV 111
+ + + + ++ N+IF+S N + D + D +SD + S + + +
Sbjct: 314 ILDAATNRWDPNEIFISD--NGTDTTDTSDSTDTSTTSDSSDSSTSSDSTDTTSTTSDST 371
Query: 112 KLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYS 171
+ S+D T D+++ SS T + ++ T + DS T + TT + +
Sbjct: 372 DTSASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDSTDTSASSDS---TDTTSTTSDST 428
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
+ + ++T T +S S TT + T T D T
Sbjct: 429 DTSASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDSTDTSASSDSTD------TTSTTS 482
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLVFLTD-GTITVQQYNTAGTS 277
+ T DST T + ++DS T TD T T +T+ +S
Sbjct: 483 DSTDTSASSDSTDTTSTTSDSTDTSASSDSTDTSTTTSDSTDTSASS 529
Score = 43.1 bits (100), Expect = 0.005
Identities = 52/266 (19%), Positives = 90/266 (33%), Gaps = 12/266 (4%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKN 95
DSS S + D + T DS + + +S D A+ D + T+ +
Sbjct: 350 DSSDSSTSSDSTDTTSTTSDSTDT-SASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDS 408
Query: 96 NGSGTLEGSKPDKSKVKLTV-------SADLNTVTLEAFDASNQKISSKVTKKQGSITEE 148
+ S S + S D + T ++ D S S+ T T+
Sbjct: 409 TDTSASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDSTDT 468
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATK-AVETLKNSIKLEGSLVVGKTTVEIKE 207
+ ++ D+ T + T S TD + T + +T +S + S +T
Sbjct: 469 SASSDSTDTTSTTSDSTDTSASSDSTDTTSTTSDSTDTSASSDSTDTSTTTSDSTDTSAS 528
Query: 208 GTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTIT 267
T D + T + T DST T + ++DS + TD + T
Sbjct: 529 SDSTDTTSTTSDSSDS---STTTSDSTDTSASSDSTDTSSTTSDSSDSSTSSDSTDTSST 585
Query: 268 VQQYNTAGTSLEGSASEIKNLSELKN 293
A S ++S+ + L N
Sbjct: 586 TSDTRHASVSFSKTSSDNRTNFNLTN 611
>ref|NP_375773.1| hypothetical protein SA2447 [Staphylococcus aureus subsp. aureus
N315]
Length = 2271
Score = 45.1 bits (105), Expect = 0.001
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKKQGSI-TEE 148
TS+ + SG++ S+ D + + S D + + A AS++ IS S T GS+ T
Sbjct: 1083 TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTSTSGSVSTST 1141
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEG 208
+L + + + S+ T+L S+ +T +++ +I S T++ + E
Sbjct: 1142 SLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASES-----TSISLSES 1196
Query: 209 TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITV 268
T E + FL+++ +STS T + S T + L+D T
Sbjct: 1197 NSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTSLSDST--- 1241
Query: 269 QQYNTAGTSLEGSASEIKNLS 289
+ + TSL S S ++S
Sbjct: 1242 SESGSTSTSLSNSTSGSASIS 1262
Score = 42.7 bits (99), Expect = 0.007
Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 24/269 (8%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
+ES+ S +L DS+ +S + L T S S+ I E S+ K +
Sbjct: 1224 SESVSSSTSESTSLSDSTSESGSTSTS-LSNSTSGSASISTSTSI---SESTSTFKSESV 1279
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
+T + TS + S +L S D + + S + T ++ S S T
Sbjct: 1280 STSLSMS---TSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTS 1336
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
GS T E+ + S+ + S ++ SQ T +T +L +S SL
Sbjct: 1337 LSGS-TSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASM 1395
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
+ + + N T+ S ++ ST T ++ S+ T
Sbjct: 1396 NQSGVDSNSASQSAS-----------NSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTS 1444
Query: 261 LTDGTITVQQYNTAGT-----SLEGSASE 284
L+D T + + +G+ SL GS SE
Sbjct: 1445 LSDSTSISKSTSQSGSTSTSASLSGSESE 1473
Score = 40.4 bits (93), Expect = 0.032
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 36/279 (12%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + SI +L DS+ + + A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
+I S GS++ K+ + S T +G+T E ++D+ + + ++ S+
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTS---DSDSKSL 1061
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISA 250
L S +T +V G + +D S + + DSTS
Sbjct: 1062 SLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS------ 1112
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
DSK T + ++ Q +A TS GS S +LS
Sbjct: 1113 DSKSAS-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 39.7 bits (91), Expect = 0.055
Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 46/263 (17%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ + ++ DS S N++ D S+S + + S N SG
Sbjct: 1876 SQSMSGSESTSTSVSDSQSSSTSNSQFD-----SMSISASESDSMSTSDSSNISGSNSTS 1930
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ TSD +GS ++ S + + S ++ T +++ +S +++
Sbjct: 1931 TSLS------TSDSMSGSVSVSTSTSLSDSISGSTSVSDSSST-----STSTSLSDSMSQ 1979
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
Q + T S L+ S T++ S T + +T +L S + S
Sbjct: 1980 SQSTSTSA--------SGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDS----- 2026
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T++ I T++ E D T+ S+ ++ DS ST T ++DS
Sbjct: 2027 TSISISGSQSTVESESTSD--------STSISDSESLSTSDSDSTSTSTSDS-------- 2070
Query: 261 LTDGTITVQQYNTAGTSLEGSAS 283
T G+ + + TS GS S
Sbjct: 2071 -TSGSTSTSISESLSTSGSGSTS 2092
Score = 36.6 bits (83), Expect = 0.47
Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 22/262 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S + +L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDSSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|NP_373178.1| serine-threoinine rich antigen [Staphylococcus aureus subsp. aureus
Mu50]
Length = 2271
Score = 45.1 bits (105), Expect = 0.001
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 23/201 (11%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKKQGSI-TEE 148
TS+ + SG++ S+ D + + S D + + A AS++ IS S T GS+ T
Sbjct: 1083 TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTSTSGSVSTST 1141
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEG 208
+L + + + S+ T+L S+ +T +++ +I S T++ + E
Sbjct: 1142 SLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASES-----TSISLSES 1196
Query: 209 TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITV 268
T E + FL+++ +STS T + S T + L+D T
Sbjct: 1197 NSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTSLSDST--- 1241
Query: 269 QQYNTAGTSLEGSASEIKNLS 289
+ + TSL S S ++S
Sbjct: 1242 SESGSTSTSLSNSTSGSASIS 1262
Score = 42.7 bits (99), Expect = 0.007
Identities = 59/269 (21%), Positives = 100/269 (37%), Gaps = 24/269 (8%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
+ES+ S +L DS+ +S + L T S S+ I E S+ K +
Sbjct: 1224 SESVSSSTSESTSLSDSTSESGSTSTS-LSNSTSGSASISTSTSI---SESTSTFKSESV 1279
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
+T + TS + S +L S D + + S + T ++ S S T
Sbjct: 1280 STSLSMS---TSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTS 1336
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
GS T E+ + S+ + S ++ SQ T +T +L +S SL
Sbjct: 1337 LSGS-TSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASM 1395
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
+ + + N T+ S ++ ST T ++ S+ T
Sbjct: 1396 NQSGVDSNSASQSAS-----------NSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTS 1444
Query: 261 LTDGTITVQQYNTAGT-----SLEGSASE 284
L+D T + + +G+ SL GS SE
Sbjct: 1445 LSDSTSISKSTSQSGSTSTSASLSGSESE 1473
Score = 40.4 bits (93), Expect = 0.032
Identities = 63/279 (22%), Positives = 108/279 (38%), Gaps = 36/279 (12%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + SI +L DS+ + + A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
+I S GS++ K+ + S T +G+T E ++D+ + + ++ S+
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTS---DSDSKSL 1061
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISA 250
L S +T +V G + +D S + + DSTS
Sbjct: 1062 SLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS------ 1112
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
DSK T + ++ Q +A TS GS S +LS
Sbjct: 1113 DSKSAS-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 39.7 bits (91), Expect = 0.055
Identities = 54/263 (20%), Positives = 102/263 (38%), Gaps = 46/263 (17%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ + ++ DS S N++ D S+S + + S N SG
Sbjct: 1876 SQSMSGSESTSTSVSDSQSSSTSNSQFD-----SMSISASESDSMSTSDSSNISGSNSTS 1930
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ TSD +GS ++ S + + S ++ T +++ +S +++
Sbjct: 1931 TSLS------TSDSMSGSVSVSTSTSLSDSISGSTSVSDSSST-----STSTSLSDSMSQ 1979
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
Q + T S L+ S T++ S T + +T +L S + S
Sbjct: 1980 SQSTSTSA--------SGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDS----- 2026
Query: 201 TTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF 260
T++ I T++ E D T+ S+ ++ DS ST T ++DS
Sbjct: 2027 TSISISGSQSTVESESTSD--------STSISDSESLSTSDSDSTSTSTSDS-------- 2070
Query: 261 LTDGTITVQQYNTAGTSLEGSAS 283
T G+ + + TS GS S
Sbjct: 2071 -TSGSTSTSISESLSTSGSGSTS 2092
Score = 36.6 bits (83), Expect = 0.47
Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 22/262 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S + +L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDSSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|NP_647392.1| hypothetical protein MW2575 [Staphylococcus aureus subsp. aureus MW2]
Length = 2275
Score = 44.7 bits (104), Expect = 0.002
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKKQGSI-TEE 148
TS+ + SG++ S+ D + + S D + + A AS++ IS S T GS+ T
Sbjct: 1083 TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTSTSGSVSTST 1141
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEG 208
+L + + + S+ T+L S+ +T +++ +I S T + + E
Sbjct: 1142 SLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASES-----TFISLSES 1196
Query: 209 TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITV 268
T E + FL+++ +STS T + S T + L+D T
Sbjct: 1197 NSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTSLSDST--- 1241
Query: 269 QQYNTAGTSLEGSASEIKNLS 289
+ + TSL S S ++S
Sbjct: 1242 SESGSTSTSLSNSTSGSASIS 1262
Score = 39.3 bits (90), Expect = 0.072
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 36/279 (12%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSS 74
Q + S +L DS+ + ++ A T DS+S+ N N S K+ S
Sbjct: 895 QSLSTSTSESSSTSASLSDSTSNAISTSESLSESASTSDSISISNSIANSQSASTSKSDS 954
Query: 75 GKYDLRATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
+ + + TS D + SG++ GS L+++A + T + S
Sbjct: 955 QSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMS 1006
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
+I S GS++ K+ + S T +G+T E ++D+ + + ++ S+
Sbjct: 1007 TSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTS---DSDSKSL 1061
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISA 250
L S +T +V G + +D S + + DSTS
Sbjct: 1062 SLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS------ 1112
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
DSK T + ++ Q +A TS GS S +LS
Sbjct: 1113 DSKSAS-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 36.6 bits (83), Expect = 0.47
Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 22/262 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S + +L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDSSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|YP_044654.1| putative cell wall-anchored protein [Staphylococcus aureus subsp.
aureus MSSA476]
Length = 2275
Score = 44.7 bits (104), Expect = 0.002
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 23/201 (11%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKKQGSI-TEE 148
TS+ + SG++ S+ D + + S D + + A AS++ IS S T GS+ T
Sbjct: 1083 TSESQSTSGSMSASQSDSMSISTSFS-DSTSDSKSASTASSESISQSASTSTSGSVSTST 1141
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEG 208
+L + + + S+ T+L S+ +T +++ +I S T + + E
Sbjct: 1142 SLSTSNSERTSTSMSDSTSLSTSESDSISESTSTSDSISEAISASES-----TFISLSES 1196
Query: 209 TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITV 268
T E + FL+++ +STS T + S T + L+D T
Sbjct: 1197 NSTSDSESQ---SASAFLSESL---------SESTSESTSESVSSSTSESTSLSDST--- 1241
Query: 269 QQYNTAGTSLEGSASEIKNLS 289
+ + TSL S S ++S
Sbjct: 1242 SESGSTSTSLSNSTSGSASIS 1262
Score = 38.9 bits (89), Expect = 0.094
Identities = 61/274 (22%), Positives = 106/274 (38%), Gaps = 36/274 (13%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQ-DLPAVTEDSVSLFNG--NKIFVSKEKNSSGKYDL 79
S +L DS+ + ++ A T DS+S+ N N S K+ S +
Sbjct: 900 STSESSSTSASLSDSTSNAISTSESLSESASTSDSISISNSIANSQSASTSKSDSQSTSI 959
Query: 80 RATIDQVELKGTS----DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS 135
+ + TS D + SG++ GS L+++A + T + S +I
Sbjct: 960 SLSTSDSKSMSTSESLSDSTSTSGSVSGS--------LSIAASQSVSTSTSDSMSTSEIV 1011
Query: 136 SKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGS 195
S GS++ K+ + S T +G+T E ++D+ + + ++ S+ L S
Sbjct: 1012 SDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSE--SLSDSQSTS---DSDSKSLSLSTS 1066
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT 255
+T +V G + +D S + + DSTS DSK
Sbjct: 1067 QSGSTSTSTSTSASVRTSESQSTSGSMSASQSD---SMSISTSFSDSTS------DSKSA 1117
Query: 256 KDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
T + ++ Q +A TS GS S +LS
Sbjct: 1118 S-----TASSESISQ--SASTSTSGSVSTSTSLS 1144
Score = 36.6 bits (83), Expect = 0.47
Identities = 47/262 (17%), Positives = 99/262 (37%), Gaps = 22/262 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S + +L DS+ S Q+++ D S S + + S S L +
Sbjct: 1518 SASESDSSSTSLSDSTSASMQSSESD-----SQSTSASLSDSLSTSTSNRMSTIASLSTS 1572
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
+ E TS+ + S + S D + SA +++ S+ ++
Sbjct: 1573 VSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSAS---------GSASTSTSTSDSRST 1623
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
+ T +++ + DS+ ++ S T+ S T ++ + S GS+ V +
Sbjct: 1624 SASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSV---S 1680
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
+ + + T T E + ++D+ ++ +S S +DSK ++
Sbjct: 1681 ISLSDSTSTSTSASE---VMSASISDSQSMSESVND-SESVSESNSESDSKSMSGSTSVS 1736
Query: 263 D-GTITVQQYNTAGTSLEGSAS 283
D G+++V S+ S+S
Sbjct: 1737 DSGSLSVSTSLRKSESVSESSS 1758
>ref|YP_303678.1| hypothetical protein Mbar_A0111 [Methanosarcina barkeri str.
fusaro]
Length = 1165
Score = 43.9 bits (102), Expect = 0.003
Identities = 43/217 (19%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 28 KENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVE 87
KEN +E+S+K +K + T+ ++ N K E N+ K + T++
Sbjct: 131 KENQKTVENSTK-----SKTETENNTKTQETIENSTKSKTETENNTKSKIE---TVENNT 182
Query: 88 LKGTSDKNNGSG---TLEGSKPDKSKVKLTVSADLNTV--TLEAFDASNQKISSKVTKKQ 142
T +NN T+E + K++ + + + TV + ++ + SK+ +
Sbjct: 183 KSKTETENNTKSKTETVENNTKSKTETENNTKSKIETVENSTKSKTETENNTKSKIETVE 242
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
S +T N SK T +N S+I +N+TK+ +N+ + +G + +
Sbjct: 243 NSTKSKTETENNTKSKTETENNTK----SKIETVENSTKSKTETENNTENQGIVEDIEQE 298
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKW 239
++ + + K ++ + K+ N++ S W
Sbjct: 299 TDLADSILHYKVYKVENSQEKIKENESKSSESNVSDW 335
>ref|NP_604343.1| Fusobacterium outer membrane protein family [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 3165
Score = 43.5 bits (101), Expect = 0.004
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 44/231 (19%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEK-------- 71
G + IG ++ ++ D++ + N K+ L + EDS ++ N I V+ EK
Sbjct: 1314 GEKGIGMLSKDTSSIADNNDIINVNGKESLGMLGEDSGTVKNNKTISVTAEKGVGIFVRD 1373
Query: 72 NSSGKYDLRA--------TIDQVELKGTSDKNNG-------SGTLEGSKPDKSKVKLTVS 116
N GK T++ E G KNNG SGT+ K D S +K ++
Sbjct: 1374 NGVGKGSGTGENTSTGTITLENKEAVGIFAKNNGTSDSAKNSGTINLGKADGSTIKESL- 1432
Query: 117 ADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDA 176
+ + A + +K + K TK I T K+ + +K + S ITD
Sbjct: 1433 -----IGMFAQAEAGKKANVKNTK---DINVNTKKSVGIYAKN---------DASNITDV 1475
Query: 177 DNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN 227
D + + + K + K + K GT+TLK I+ +G V+++
Sbjct: 1476 D--LENTGDININSKESAGVYAPKANIS-KVGTITLKNSIDSNGSSAVYVS 1523
>ref|YP_581104.1| ATPase [Psychrobacter cryohalolentis K5]
Length = 646
Score = 43.5 bits (101), Expect = 0.004
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 19/152 (12%)
Query: 122 VTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATK 181
VT EA A V K+ + L NK++ K+L +G + + + D+ K
Sbjct: 202 VTFEAIAALEATFDQNVDIKRTRLYTHNLNVNKINDKELADLSGEMMRFEATSVGDS--K 259
Query: 182 AVETLKNSIKLEGSLV--VGKTTVEIKEGT---------------VTLKREIEKDGKVKV 224
VETLK +++ + LV VG + IK T +K + K+ +
Sbjct: 260 LVETLKKTVRTQDDLVLKVGSKVMFIKNNTELGVSNGTMGELIGFAAVKIDDSKESSDDL 319
Query: 225 FLNDTAGSNKKTGKWEDSTSTLTISADSKKTK 256
+D GS+K + D + + +KK K
Sbjct: 320 IEDDDIGSDKDSDVGNDKQAAKSAKEKAKKDK 351
>ref|YP_561402.1| hypothetical protein Sden_0384 [Shewanella denitrificans OS217]
Length = 4285
Score = 43.5 bits (101), Expect = 0.004
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 20/252 (7%)
Query: 48 DLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPD 107
D P+V + + N + + + D T+ E+ GTS S TLEG
Sbjct: 157 DSPSVLANDSNTINEDGVATGNVLLNDSDTDTVLTVTSFEVGGTSFPAGTSVTLEG---- 212
Query: 108 KSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTT 167
+ L E ++ S I+ T GS T+ +D + ++ T
Sbjct: 213 -GVLVLNADGSYTFTPNENWNGSVPVIT--YTTNTGSTATLTITVTPVDDPSVLDNDTNT 269
Query: 168 LEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN 227
+ A++ + L N L+ +L V T+ E+ + T + +G V V
Sbjct: 270 I-------AEDTVASGNVLDNDSDLDNTLTV--TSFEVDGTSYTAGTSVTLEGGVLVLNA 320
Query: 228 DTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF----LTDGTITVQQYNTAGTSLEGSAS 283
D + + W S +T + ++ T L + D ++ + NT S +
Sbjct: 321 DGSYTFTPNENWNGSVPVITYTTNTGSTATLTITVTPVDDSSLLINDTNTIAEDTVASGN 380
Query: 284 EIKNLSELKNAL 295
+ N S+L N L
Sbjct: 381 VLDNDSDLDNTL 392
Score = 34.7 bits (78), Expect = 1.8
Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 16/211 (7%)
Query: 48 DLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPD 107
D P+V ++ + + + ++ D T+ E+ GTS S TLEG
Sbjct: 258 DDPSVLDNDTNTIAEDTVASGNVLDNDSDLDNTLTVTSFEVDGTSYTAGTSVTLEG---- 313
Query: 108 KSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTT 167
+ L E ++ S I+ T GS T+ +D L ++ T
Sbjct: 314 -GVLVLNADGSYTFTPNENWNGSVPVIT--YTTNTGSTATLTITVTPVDDSSLLINDTNT 370
Query: 168 LEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN 227
+ A++ + L N L+ +L V T+ E+ + T + +G V V
Sbjct: 371 I-------AEDTVASGNVLDNDSDLDNTLTV--TSFEVDGTSYTAGTSVTLEGGVLVLNA 421
Query: 228 DTAGSNKKTGKWEDSTSTLTISADSKKTKDL 258
D + + W S +T + ++ T L
Sbjct: 422 DGSYTFTPNENWNGSVPVVTYTTNTGSTATL 452
>ref|YP_891684.1| surface array protein [Campylobacter fetus subsp. fetus 82-40]
Length = 1292
Score = 43.1 bits (100), Expect = 0.005
Identities = 69/275 (25%), Positives = 106/275 (38%), Gaps = 35/275 (12%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
KG +I + + +N D+S S + DL A +V +G+ FV K ++ D
Sbjct: 383 KGNANITLEVKAGVNSLDASASSGK-VSADLKAADVKTVKGGSGDDKFVVGTKVANVNVD 441
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKI---- 134
A D++E+ NG+GTL+ + + KV L + L A D S I
Sbjct: 442 GGAGNDELEI-------NGAGTLKPTVANVEKVTLDATGALTLAMDNAKDVSELNIKGDK 494
Query: 135 ------SSKVTKKQGSITEETLKANKLDSKKLTRSN---GTTLEYSQITDADNATKAVET 185
+S ++ T E A +DS+ L N GT E ++I ATKA
Sbjct: 495 GAVTVVNSNISSLNFLSTAEGTNAVTIDSENLATINYKAGT--EAAEIKGNLTATKATNL 552
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK----VKVFLNDTAGSNKKTGKWE- 240
N+ L G T +++L EK + L D A NK +
Sbjct: 553 TVNTDALANITSTGATITANSATSMSLNINAEKTAQSLKLSATKLKDLAVVNKSVDGFTI 612
Query: 241 -------DSTSTLTISADSKKTKDLVFLTDGTITV 268
D+ S L ++ D K + D + G TV
Sbjct: 613 KGDANSLDALSNLNVTTDGKFSFDTITGLAGVSTV 647
>ref|NP_439153.1| immunoglobin A1 protease [Haemophilus influenzae Rd KW20]
Length = 1694
Score = 42.7 bits (99), Expect = 0.007
Identities = 66/285 (23%), Positives = 107/285 (37%), Gaps = 38/285 (13%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL- 79
A+ G +N+L L D+S + N L T D + + K +N +G+YDL
Sbjct: 935 ADKTGEPTKNELTLFDASNATRNNLNVSLVGNTVDLGA-------WKYKLRNVNGRYDLY 987
Query: 80 -------RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFD--AS 130
T+D + ++ ++ + + ++V+ V E + A
Sbjct: 988 NPEVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVETPVPPPAPATPSETTETVAE 1047
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
N K SK T++ N+ D+ + T NG E +A + KA T N +
Sbjct: 1048 NSKQESK-----------TVEKNEQDATETTAQNGEVAE-----EAKPSVKA-NTQTNEV 1090
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKV-KVFLNDTAGSNKKTGKWEDSTSTLTIS 249
GS T EIKE T K E E+ KV K + + +T + + +S
Sbjct: 1091 AQSGSETEETQTTEIKE---TAKVEKEEKAKVEKDEIQEAPQMASETSPKQAKPAPKEVS 1147
Query: 250 ADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNA 294
D+K + V T + TS +E SE NA
Sbjct: 1148 TDTKVEETQVQAQPQTQSTTVAAAEATSPNSKPAEETQPSEKTNA 1192
>ref|YP_252241.1| hypothetical protein SH0326 [Staphylococcus haemolyticus JCSC1435]
Length = 3608
Score = 42.7 bits (99), Expect = 0.007
Identities = 49/228 (21%), Positives = 88/228 (38%), Gaps = 19/228 (8%)
Query: 58 SLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSA 117
+ FNG K+ V+ +++ + + TS + + + S + + SA
Sbjct: 484 NFFNGKKVTVTDPTSTANSQSASTSTANSQSASTSKSTSTANSQSASTSTSTSTANSQSA 543
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
+T T A S +S T S + T + +S+ + S T+ SQ T
Sbjct: 544 STSTSTSTANSQSASTSTSTSTANSQSASTST-STSTANSQSTSTSTSTSTANSQSTSTS 602
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSN-KKT 236
+T ++ S L GS T+ + + T L+D+A ++ +
Sbjct: 603 TSTSVSDSTSASTSLSGS-----TSTSVSDST-----------SASTSLSDSASTSVSDS 646
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTIT-VQQYNTAGTSLEGSAS 283
S S T +++S T L++ T T + +A TSL SAS
Sbjct: 647 TSASTSLSASTSTSESDSTSASTSLSESTSTSLSDSLSASTSLSDSAS 694
Score = 42.0 bits (97), Expect = 0.011
Identities = 54/276 (19%), Positives = 107/276 (38%), Gaps = 26/276 (9%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
+E++ +Q + ++S + +++ + ++D+ S N +++ SS D +
Sbjct: 106 SETVANQNSTTVTKSETSTTEYISSQT---STSQDATSSTNS-----TEKSTSSSTTDSQ 157
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
+ D K TS+ ++ S S T ++ N T D ++Q ++
Sbjct: 158 TSTDSTSDKSTSNSEKQDSSMSNSDTKASSSSTTDNSTSNNSTTSEKDTNSQANTTSTDS 217
Query: 141 KQGSIT------------EETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
++GS + + ++ N +S +T SN T+ S T + N+T + T +
Sbjct: 218 QKGSTSTNDNSITSTSTKDNQIRKNSTESNSITASNSTSDSNSGSTVSTNSTTSQLTSTS 277
Query: 189 SIKLE---GSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGS--NKKTGKWEDST 243
++ GS ++ + T LK F A S N TG D+
Sbjct: 278 ESQINTDLGSTLLVSDSTSTSTSTAPLKLRTFSRLATTTFAAAAATSTTNTYTGAGTDTN 337
Query: 244 STLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
+ I + +T T TV N A T++E
Sbjct: 338 YNIPIYYKLTTVNNGTSMT-FTYTVTYDNPATTTVE 372
Score = 41.2 bits (95), Expect = 0.019
Identities = 63/262 (24%), Positives = 94/262 (35%), Gaps = 30/262 (11%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+ +L +S+ S N+ S SL VS ++S L A+
Sbjct: 2088 SVSDSTSTSTSLSESTSTSLSNS-------ASASTSLSGSTSTSVSD--STSASTSLSAS 2138
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
TS + SG+ S D +VSA +T ++ AS S T
Sbjct: 2139 TSTSVSDSTSMSTSLSGSESTSLSDSLSASTSVSASTSTSVSDSTSASTSLSGSTSTSVS 2198
Query: 143 GSI-TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKT 201
S T +L + S + S T+L S T ++T A +L S S T
Sbjct: 2199 DSTSTSTSLSESTSTSVSDSASASTSLSDSASTSVSDSTSASTSLSGSTSTSVSDST-ST 2257
Query: 202 TVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFL 261
+ + E T T + L+D+A ++ DSTS T + S T
Sbjct: 2258 STSLSESTST---SLSDSASASTSLSDSASTSV-----SDSTSASTSLSGSTST------ 2303
Query: 262 TDGTITVQQYNTAGTSLEGSAS 283
+V +A TSL GS S
Sbjct: 2304 -----SVSDSTSASTSLSGSTS 2320
Score = 38.5 bits (88), Expect = 0.12
Identities = 59/240 (24%), Positives = 87/240 (36%), Gaps = 21/240 (8%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
T S SL VS ++S L A+ TS + SG+ S D
Sbjct: 2021 TSASTSLSASTSTSVSDSTSTSTS--LSASTSTSVSDSTSASTSLSGSASASLSDSLSAS 2078
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET-LKANKLDSKKLTRSNGTTLEYS 171
+VSA +T ++ S S T S + T L + S + S T+L S
Sbjct: 2079 TSVSASTSTSVSDSTSTSTSLSESTSTSLSNSASASTSLSGSTSTSVSDSTSASTSLSAS 2138
Query: 172 QITDADNATKAVETL--KNSIKLEGSL-----VVGKTTVEIKEGTVTLKREIEKDGKVKV 224
T ++T +L S L SL V T+ + + T G
Sbjct: 2139 TSTSVSDSTSMSTSLSGSESTSLSDSLSASTSVSASTSTSVSDST---SASTSLSGSTST 2195
Query: 225 FLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTIT-VQQYNTAGTSLEGSAS 283
++D+ ++ +STST + S T L+D T V +A TSL GS S
Sbjct: 2196 SVSDSTSTSTSL---SESTSTSVSDSASASTS----LSDSASTSVSDSTSASTSLSGSTS 2248
Score = 37.7 bits (86), Expect = 0.21
Identities = 55/257 (21%), Positives = 92/257 (35%), Gaps = 12/257 (4%)
Query: 33 NLEDSSKKSHQNAKQDLPAVTED-SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGT 91
++ DS+ S ++ +V++ S S S ++S L A+ T
Sbjct: 2376 SVSDSTSTSTSDSASTSTSVSDSTSASTSLSASTSTSVSDSTSASTSLSASTSTSVSDST 2435
Query: 92 SDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET-L 150
S + SG+ S D +VSA +T ++ S S T S + T L
Sbjct: 2436 SASTSLSGSASASLSDSLSASTSVSASTSTSVSDSTSTSTSLSESTSTSLSNSASASTSL 2495
Query: 151 KANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTV 210
+ S + S T+L S T ++T +L S S +T +
Sbjct: 2496 SGSTSTSVSDSTSASTSLSASTSTSVSDSTSTSTSLSESTSTSLSDSASASTSLSDSAST 2555
Query: 211 TL----KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTI 266
++ G L+D+A ++ STST + S T D V +
Sbjct: 2556 SVSDSTSASTSLSGSESTSLSDSASASTSLSA---STSTSVSDSTSTSTSDSV---STST 2609
Query: 267 TVQQYNTAGTSLEGSAS 283
++ + TSL GS S
Sbjct: 2610 SMSDSTSMSTSLSGSTS 2626
Score = 37.7 bits (86), Expect = 0.21
Identities = 56/232 (24%), Positives = 85/232 (36%), Gaps = 23/232 (9%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
T S SL VS ++S L A+ TS + SG+ S D
Sbjct: 1445 TSASTSLSASTSTSVSD--STSASTSLSASTSTSVSDSTSMSTSLSGSESTSLSDSLSAS 1502
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSI-TEETLKANKLDSKKLTRSNGTTLEYS 171
+VSA +T ++ AS S T S T +L + S + S T+L S
Sbjct: 1503 TSVSASTSTSVSDSTSASTSLSGSTSTSVSDSTSTSTSLSESTSTSVSDSASASTSLSAS 1562
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
T ++T A +L S T+ + + T ++D+
Sbjct: 1563 TSTSVSDSTSASTSLSAS-----------TSTSVSDST---SASTSLSASTSTSVSDSTS 1608
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
++ S ST T +DS T + + T +V +A TSL GSAS
Sbjct: 1609 ASTSL-----SASTSTSVSDSTSTSTSLSASTST-SVSDSTSASTSLSGSAS 1654
Score = 37.4 bits (85), Expect = 0.27
Identities = 57/239 (23%), Positives = 86/239 (35%), Gaps = 19/239 (7%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
T S SL VS ++S L A+ TS + SG+ S D
Sbjct: 1607 TSASTSLSASTSTSVSDSTSTSTS--LSASTSTSVSDSTSASTSLSGSASASLSDSLSAS 1664
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET-LKANKLDSKKLTRSNGTTLEYS 171
+VSA +T ++ S S+ T S++ T + A+ S + S T+L S
Sbjct: 1665 TSVSASTSTSVSDSTSMSTSLSGSESTSLSDSLSASTSVSASTSTSVSDSTSASTSLSGS 1724
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
T ++T +L S S +T + ++ T+
Sbjct: 1725 TSTSVSDSTSTSTSLSESTSTSVSDSASASTSLSDSASTSVSDSTSA---------STSL 1775
Query: 232 SNKKTGKWEDSTSTLTISADSKKT------KDLVFLTDGTIT-VQQYNTAGTSLEGSAS 283
S + DSTST T ++S T L+D T V +A TSL GS S
Sbjct: 1776 SGSTSTSVSDSTSTSTSLSESTSTSLSDSASASTSLSDSASTSVSDSTSASTSLSGSTS 1834
Score = 33.1 bits (74), Expect = 5.2
Identities = 56/239 (23%), Positives = 86/239 (35%), Gaps = 35/239 (14%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
T S SL VS ++S L A+ TS + SG+ S D
Sbjct: 2831 TSASTSLSASTSTSVSDSTSTSTS--LSASTSTSVSDSTSASTSLSGSASASLSDSLSAS 2888
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET-LKANKLDSKKLTRSNGTTLEYS 171
+VSA +T ++ S S T S + T L + S + S T++ S
Sbjct: 2889 TSVSASTSTSVSDSTSTSTSLSESTSTSLSNSASASTSLSGSASASLSDSLSASTSVSAS 2948
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
T ++T T+ + E T T + L+D+A
Sbjct: 2949 TSTSVSDST-------------------STSTSLSESTST---SLSDSASASTSLSDSAS 2986
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYN-TAGTSLEGSASEIKNLS 289
++ DSTS T ++S T ++D T T + + TSL SAS +LS
Sbjct: 2987 TSV-----SDSTSASTSLSESTSTS----VSDSTSTSTSLSGSESTSLSDSASASTSLS 3036
>ref|YP_803624.1| Predicted outer membrane protein [Pediococcus pentosaceus ATCC
25745]
Length = 885
Score = 42.0 bits (97), Expect = 0.011
Identities = 59/264 (22%), Positives = 100/264 (37%), Gaps = 11/264 (4%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKN 95
D++ + + D + T+ S + + S +++ D T D TSD
Sbjct: 594 DTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTT 653
Query: 96 NGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKL 155
+ + T + S D + T T T D S+ ++ T +T+ T N
Sbjct: 654 DTTSTTDTS--DTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTS-DMTDTTSTTNTS 710
Query: 156 DSKKLTRSNGT--TLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLK 213
D+ T + T T + + TD + T T S + + T + + T T
Sbjct: 711 DTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTN--TSDTADTTSTTD 768
Query: 214 REIEKDGKVKVFLNDT--AGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQY 271
D +DT + S T +TST ++ S TK+ V G IT
Sbjct: 769 TSDTTDTTSITDTSDTTDSASTTDTSNTTGTTSTTDTTSTSNSTKNSVPKLPGKITSGSS 828
Query: 272 NTAGTSLEGSASEIKNLSELKNAL 295
T+ TS +G+++ K S LK+ L
Sbjct: 829 GTS-TSKKGNSTS-KKSSGLKSPL 850
Score = 40.4 bits (93), Expect = 0.032
Identities = 56/266 (21%), Positives = 90/266 (33%), Gaps = 17/266 (6%)
Query: 25 GSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATID 84
G + N ++ D+ + + D + T+ S + + S +++ D T D
Sbjct: 559 GIVEVNVEDIPDTISTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTDTSDTTD 618
Query: 85 QVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGS 144
TSD + + T + S D + T T T D S+ ++ T
Sbjct: 619 TTSTTDTSDTTDTTSTTDTS--DTTDTTSTTDTSDTTDTTSTTDTSDTTDTTSTTD---- 672
Query: 145 ITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKT-TV 203
T +T T +T + S +TD + T +T + + S T T
Sbjct: 673 -TSDTTDTTSTTDTSDTTDTTSTTDTSDMTDTTSTTNTSDTTDTTSTTDTSDTTDTTSTT 731
Query: 204 EIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS--ADSKKTKDLVFL 261
+ + T T D DT S T D+TST S D+ D
Sbjct: 732 DTSDTTDTTSTTDTSD------TTDTT-STTNTSDTADTTSTTDTSDTTDTTSITDTSDT 784
Query: 262 TDGTITVQQYNTAGTSLEGSASEIKN 287
TD T NT GT+ + N
Sbjct: 785 TDSASTTDTSNTTGTTSTTDTTSTSN 810
>ref|NP_389413.1| bacillopeptidase F [Bacillus subtilis subsp. subtilis str. 168]
Length = 1433
Score = 41.6 bits (96), Expect = 0.015
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 25/199 (12%)
Query: 56 SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV 115
+V ++NG K + + G + +++ E + T+ + +GT + S P + +T+
Sbjct: 1184 TVHIYNGEKEAGETKAAADGTFHAGIILNKGENELTATASTDNGTTDASSP----ITVTL 1239
Query: 116 SADLNTVTLEAFDASNQKISSKVTKK----QGSITEETLKANKLDSKKLTRSNGTTLEYS 171
+ +TL+ N K K K+ +G+++++ LK K++ KK T ++G+
Sbjct: 1240 DQEKPELTLD-----NPKDGGKTNKETLTVKGAVSDDNLKDVKVNGKKATVADGSYSARI 1294
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
+ + N K + T L G+ KT +++ + I + K N AG
Sbjct: 1295 LLENGRNEIKVIAT-----DLAGNKTTKKTVIDVNFDKPVISGLIPGEDK-----NLKAG 1344
Query: 232 SNKKT--GKWEDSTSTLTI 248
+ K ED +T TI
Sbjct: 1345 ESVKIAFSSAEDLDATFTI 1363
>ref|YP_603083.1| Putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS10750]
Length = 1277
Score = 41.6 bits (96), Expect = 0.015
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 39/276 (14%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
KG + + +N NL +K S ++ A+ + ++ NK + + + K
Sbjct: 163 KGTQKVVKSGKNTANLSLITKLSQEDG-----AILFPEIDRYSDNKQIKALTQQIT-KVT 216
Query: 79 LRATIDQVELKGTSDKNNG-----SGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK 133
+ T+ + + + NG +G G+K K NT+ + + +
Sbjct: 217 VNGTVYKDLISDSVKDTNGWVSNMTGLHLGTKAFKDGE--------NTIVISS--KGFED 266
Query: 134 ISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
I+ VTKK G I + K + + ++LT+ + TTLE + I +AD A A E+ K+++
Sbjct: 267 ITITVTKKDGQIHFVSAKQKQHVTAEDRQLTKLDVTTLEKA-IKEAD-AIIAKESNKDAV 324
Query: 191 K--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKTGK 238
K E V+ + EIK+ + LK IE +V +N+ T G+ N K K
Sbjct: 325 KDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKANK 384
Query: 239 WEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
S++ A K+ K LV DGT+ + NTA
Sbjct: 385 ENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|NP_458235.1| putative autotransporter [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
Length = 1107
Score = 41.2 bits (95), Expect = 0.019
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 36/260 (13%)
Query: 26 SQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQ 85
++ N + S +++ ++E+S NG+++F + EK D+ A
Sbjct: 338 NETTNSFSASHGSSTTNKITNVAAGELSEESTDAVNGSQLFETNEKVDQNTTDIAANTTN 397
Query: 86 VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK-KQGS 144
+ T+ +N + S + S LT +A L AF A++ +SK+T G+
Sbjct: 398 ITQNSTAIENLNTSV---SDINTSITGLTDNALLWDEDTGAFSANHGGSTSKITNVAAGA 454
Query: 145 ITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVE 204
++E++ A NG+ L Y D T A+ + SI +L + +
Sbjct: 455 LSEDSTDA----------VNGSQL-YETNQKVDQNTSAIADINTSIT---NLGTDALSWD 500
Query: 205 IKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDG 264
+EG + + T+G+NK T + + I++DS + L +
Sbjct: 501 DEEGAFSAS-------------HGTSGTNKIT-----NVAAGEIASDSTDAINGSQLYET 542
Query: 265 TITVQQYNTAGTSLEGSASE 284
+ + QYN + + L G SE
Sbjct: 543 NMLISQYNESISQLAGDTSE 562
>ref|NP_807449.1| putative autotransporter [Salmonella enterica subsp. enterica
serovar Typhi Ty2]
Length = 1116
Score = 41.2 bits (95), Expect = 0.019
Identities = 56/260 (21%), Positives = 106/260 (40%), Gaps = 36/260 (13%)
Query: 26 SQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQ 85
++ N + S +++ ++E+S NG+++F + EK D+ A
Sbjct: 347 NETTNSFSASHGSSTTNKITNVAAGELSEESTDAVNGSQLFETNEKVDQNTTDIAANTTN 406
Query: 86 VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK-KQGS 144
+ T+ +N + S + S LT +A L AF A++ +SK+T G+
Sbjct: 407 ITQNSTAIENLNTSV---SDINTSITGLTDNALLWDEDTGAFSANHGGSTSKITNVAAGA 463
Query: 145 ITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVE 204
++E++ A NG+ L Y D T A+ + SI +L + +
Sbjct: 464 LSEDSTDA----------VNGSQL-YETNQKVDQNTSAIADINTSIT---NLGTDALSWD 509
Query: 205 IKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDG 264
+EG + + T+G+NK T + + I++DS + L +
Sbjct: 510 DEEGAFSAS-------------HGTSGTNKIT-----NVAAGEIASDSTDAINGSQLYET 551
Query: 265 TITVQQYNTAGTSLEGSASE 284
+ + QYN + + L G SE
Sbjct: 552 NMLISQYNESISQLAGDTSE 571
>ref|NP_462591.1| putative inner membrane protein [Salmonella typhimurium LT2]
Length = 1461
Score = 41.2 bits (95), Expect = 0.019
Identities = 54/234 (23%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 52 VTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKV 111
++E+S NG+++F + EK D+ A + T+ +N + S + S
Sbjct: 718 LSEESTDAVNGSQLFETNEKVDQNTTDIAANTTNITQNSTAIENLNTSV---SDINTSIT 774
Query: 112 KLTVSADLNTVTLEAFDASNQKISSKVTK-KQGSITEETLKANKLDSKKLTRSNGTTLEY 170
LT +A L AF A++ +SK+T G+++E++ A NG+ L Y
Sbjct: 775 GLTDNALLWDEDTGAFSANHGGSTSKITNVAAGALSEDSTDA----------VNGSQL-Y 823
Query: 171 SQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTA 230
D T A+ + SI +L + + +EG + + T+
Sbjct: 824 ETNQKVDQNTSAIADINTSIT---NLGTDALSWDDEEGAFSAS-------------HGTS 867
Query: 231 GSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASE 284
G+NK T + + I++DS + L + + + QYN + + L G SE
Sbjct: 868 GTNKIT-----NVAAGEIASDSTDAVNGSQLYETNMLISQYNESISQLAGDTSE 916
Score = 36.6 bits (83), Expect = 0.47
Identities = 48/247 (19%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 51 AVTEDSVSLFNGNKIFVSKEK---NSSGKYDLRATIDQVELKGTS-DKNNGSGTLEGSKP 106
A++EDS NG++++ + +K N+S D+ +I + S D G+ +
Sbjct: 808 ALSEDSTDAVNGSQLYETNQKVDQNTSAIADINTSITNLGTDALSWDDEEGAFSASHGTS 867
Query: 107 DKSKVKLTVSADLNTVTLEAFDAS-----NQKIS--SKVTKKQGSITEETLKANKLDSKK 159
+K+ + ++ + + +A + S N IS ++ + T ET K
Sbjct: 868 GTNKITNVAAGEIASDSTDAVNGSQLYETNMLISQYNESISQLAGDTSETYITENGTGVK 927
Query: 160 LTRSNGTTLEYSQITDADNATKAV--ETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIE 217
R+N LE N AV + + + GSL +G+ + EG++ L
Sbjct: 928 YIRTNDNGLEGQDAYATGNGATAVGYDAVASG---AGSLALGQNSSSSIEGSIALGSGST 984
Query: 218 KDGKVKVFLNDTAGSNKKTGKWEDST-----STLTISADSKKTKDLVFLTDGT-----IT 267
+ + + +T+ ++ ++T L++ D + + + + DG+ +T
Sbjct: 985 SNRAITTGIRETSATSDGVVIGYNTTDRELLGALSLGTDGESYRQITNVADGSEAQDAVT 1044
Query: 268 VQQYNTA 274
V+Q A
Sbjct: 1045 VRQLQNA 1051
>ref|YP_964748.1| hypothetical protein Sputw3181_3382 [Shewanella sp. W3-18-1]
Length = 318
Score = 40.8 bits (94), Expect = 0.025
Identities = 54/220 (24%), Positives = 86/220 (39%), Gaps = 22/220 (10%)
Query: 27 QKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD-LRATIDQ 85
QK N+L +ED + H N D G+K+ + K D + A +
Sbjct: 78 QKGNNLTIEDKMPR-HYNGSDD------------KGSKLTIKVPKTVKLNADTISANMQI 124
Query: 86 VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV--TKKQG 143
++KG D N+ SG + S TVS D+ T LE + +S K+ T+ QG
Sbjct: 125 AQVKGELDLNSVSGNITADGLGGSPSLHTVSGDITTKGLEG-KVMLETVSGKIQDTESQG 183
Query: 144 SITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATK--AVETLKNSIKLEGSLVVGKT 201
I + L + L+S+ L +IT + K +V T+ ++ + K
Sbjct: 184 EI-KYRLVSGDLNSQTLAEKVKVEQVSGEITADFSKAKEISVRTVSGDTQISLAKTFDKA 242
Query: 202 TVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWED 241
V+ G +TL + D LN K G +D
Sbjct: 243 NVDSVSGDITLTFPEQPDANFD--LNGGPSGKIKNGLSQD 280
>ref|YP_218602.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 1446
Score = 40.8 bits (94), Expect = 0.025
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 52 VTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKV 111
++E+S NG+++F + EK D+ A + T+ +N + S + S
Sbjct: 704 LSEESTDAVNGSQLFETNEKVDQNTTDIAANTTNITQSSTAIENLNTSV---SDINTSIT 760
Query: 112 KLTVSADLNTVTLEAFDASNQKISSKVTK-KQGSITEETLKANKLDSKKLTRSNGTTLEY 170
LT +A L + AF A++ +SK+T G+++E++ A NG+ L Y
Sbjct: 761 GLTDNALLWDEDIGAFSANHGGSTSKITNVAAGALSEDSTDA----------VNGSQL-Y 809
Query: 171 SQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTA 230
D T A+ + SI +L + + +EG + + T+
Sbjct: 810 ETNQKVDQNTSAIADINTSIT---NLGTDALSWDDEEGAFSAS-------------HSTS 853
Query: 231 GSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASE 284
G+NK T + + I++DS + L + + + QY+ + + L G SE
Sbjct: 854 GTNKIT-----NVAAGEIASDSTDAVNGSQLYETNMLISQYSESISQLAGDTSE 902
Score = 38.5 bits (88), Expect = 0.12
Identities = 51/252 (20%), Positives = 96/252 (38%), Gaps = 37/252 (14%)
Query: 51 AVTEDSVSLFNGNKIFVSKEK---NSSGKYDLRATIDQVELKGTS-DKNNGSGTLEGSKP 106
A++EDS NG++++ + +K N+S D+ +I + S D G+ + S
Sbjct: 794 ALSEDSTDAVNGSQLYETNQKVDQNTSAIADINTSITNLGTDALSWDDEEGAFSASHSTS 853
Query: 107 DKSKVKLTVSADLNTVTLEAFDAS-----NQKIS--SKVTKKQGSITEETLKANKLDSKK 159
+K+ + ++ + + +A + S N IS S+ + T ET K
Sbjct: 854 GTNKITNVAAGEIASDSTDAVNGSQLYETNMLISQYSESISQLAGDTSETYITENGTGVK 913
Query: 160 LTRSNGTTLEYSQITDADNATKAV------------ETLKNSIKLEGSLVVGKTTVEIKE 207
R+N LE N AV +NS +EGS+ +G + +
Sbjct: 914 YIRTNDNRLEGQDAYATGNGATAVGYDAVASGAGSLALGQNSSSIEGSIALGSGSTSNRA 973
Query: 208 GTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGT-- 265
T ++ V + N T + L++ D + + + + DG+
Sbjct: 974 ITTGIRETSATSDGVVIGYNTTD---------RELLGALSLGTDGESYRQITNVADGSEA 1024
Query: 266 ---ITVQQYNTA 274
+TV+Q A
Sbjct: 1025 QDAVTVRQLQNA 1036
>ref|YP_434699.1| hypothetical protein HCH_03530 [Hahella chejuensis KCTC 2396]
Length = 781
Score = 40.4 bits (93), Expect = 0.032
Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 18 QKGAESIGSQKENDLNLE-----DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKN 72
+KG ES+ E D N+E ++ K H + + DSV+ + + +
Sbjct: 570 KKGEESLNIHAEKDFNMEVKNNIGANAKGHSTS--SIGGNASDSVAGNSSLSVGGDHSVS 627
Query: 73 SSGKYDLRATIDQV-ELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEA---FD 128
+GK ++ T Q + G N G+ E + +T +A T+TL A
Sbjct: 628 VTGKQNVSVTGAQTHSVTGAQTLNVGADQTESVSGN-----ITQNATNQTLTLSADQTVS 682
Query: 129 ASNQKI----SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVE 184
A+NQK+ + +VT T L++ + D++ +T + TT + TD D A
Sbjct: 683 ATNQKVNLGAAQEVTASSQKFTISGLQSVQADAQTVTVTGKTT---TTATDIDLAAGG-- 737
Query: 185 TLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
SL VG T+++I +G VT+
Sbjct: 738 --------NISLRVGGTSIQINDGGVTI 757
>ref|YP_813898.1| Adhesion exoprotein [Lactobacillus gasseri ATCC 33323]
Length = 3692
Score = 40.4 bits (93), Expect = 0.032
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 85 QVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGS 144
Q + T+D N G PD S K D T +++ D N S +T K +
Sbjct: 1205 QPSITWTTDNN---GKFAQVTPDASIKK---GDDTWTTGVKSVDEKNAPDVSTITGK--T 1256
Query: 145 ITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATK-----AVETL----KNSIKLEGS 195
E+ L K T + T I DN TK AVE + IK E
Sbjct: 1257 TNEDVYVPYTLSQKTYTGTKETKTVTRVINYLDNETKQPVSDAVEQTTTLSRTQIKDEKG 1316
Query: 196 LVVGKTTVEIKEGTVTLKRE--IEKDGKV-KVFLNDTAGSNKKTGKWEDSTSTLTISADS 252
V+G TV + TL + I+K+G V +V ++TA K+T +ED T++AD+
Sbjct: 1317 NVIGYGTVSEDGHSYTLNNDWTIDKNGWVAQVSPDETAKGYKETPHFEDGKDASTVAADT 1376
Query: 253 KKTKD 257
D
Sbjct: 1377 PSVTD 1381
>ref|YP_189847.1| lipase [Staphylococcus epidermidis RP62A]
Length = 688
Score = 40.0 bits (92), Expect = 0.042
Identities = 64/277 (23%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNG---NKIFVSKEKNSSGKYD 78
+SIG + E L+ + S++ + N K ++ ++TE+ SL N N+ + ++K+S
Sbjct: 51 QSIGDENEK-LSEQQSTQNKNVNEKSNVDSITENE-SLHNETPKNEDLIQQQKDSQNDNK 108
Query: 79 LRATIDQ--------------------VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSAD 118
+ ++Q VEL+ + +NN TL ++ T +
Sbjct: 109 SESVVEQNKENEAFVKKHSEEKPQQEQVELEKHASENN--QTLHSKAAQSNEDVKTKPSQ 166
Query: 119 LNTVTLEAFDASNQKISSKVTKKQGSITEETLKA----NKLDSKKLTRSNGTTLEYSQIT 174
L+ T + D+ + +S + T Q S T + L+A DS+ N +Q
Sbjct: 167 LDNTTAQQEDSQKENLSKQDT--QSSKTTDLLRATGQNQSKDSQSTEEVNKEVKNDTQQV 224
Query: 175 DADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNK 234
A N VET + K E V + + + + DG + N A +NK
Sbjct: 225 TAKNDDDKVETFNLNSKEEPLKVDKQANPTTDKDKSSKNDKGSHDGLANLESNAVATTNK 284
Query: 235 K-----TGKWEDSTSTLTISADSK--KTKDLVFLTDG 264
+ + K ED T+ SA K K D + L G
Sbjct: 285 QSKQQVSEKNEDQTNK---SAKQKQYKNNDPIILVHG 318
>ref|NP_720544.1| hypothetical protein SMU.63c [Streptococcus mutans UA159]
Length = 613
Score = 39.7 bits (91), Expect = 0.055
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 28/286 (9%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTED--SVSLFNGNKIFVSKEKNSSGKYDL 79
E + KE+D + + K + K V D ++++ + ++ +
Sbjct: 161 EEVNEYKEDDKSEKADIKFDNTGVKTTSSGVNIDGKNITITSAGTYTITGSASGYSISVA 220
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKV--KLTVSADLNTVTLEA----FDASNQK 133
D V+LK N TL S+ KV ++S+ L T+E + +S +K
Sbjct: 221 DKVTDTVKLK-LDAVNLTDSTLYSSRDLDIKVLSDSSISSSLKN-TIETGGALYISSKKK 278
Query: 134 ISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKL- 192
KVT G +KAN L++ K+T +T + D NAT V K+++ +
Sbjct: 279 SGLKVTSTAG----HAIKANSLEADKVTLELSSTAK-----DGINATSNVSIKKSNVTIS 329
Query: 193 -EGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISAD 251
E + + ++ G + +K I K + + G ++ +TI++
Sbjct: 330 AEDDGIQAEDNTDVNSGDIQIKDSIVK------ITSTSKGITANDEITVKGSTFITITSG 383
Query: 252 SKKTKD-LVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
S+ + V L G IT+ + A + E + + +LS LKN+ K
Sbjct: 384 SEGIEGRYVNLKKGQITINAGDDAINATEWTTKDDADLSHLKNSKK 429
>ref|YP_374298.1| VCBS [Pelodictyon luteolum DSM 273]
Length = 6678
Score = 39.7 bits (91), Expect = 0.055
Identities = 44/173 (25%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 84 DQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQG 143
D EL G ++ + T S + + TV A NTVTL G
Sbjct: 1900 DDQELNGLNESDLKLYTSTDSGSTWTFIGGTVDATANTVTLAGL---------------G 1944
Query: 144 SITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTV 203
S++ TL N + +T S GTT T++ +A+ + + K ++ S+ V +
Sbjct: 1945 SLSLVTLGVN---APAVTASAGTTA----FTESASASASGDAKK----IDESITVSARSG 1993
Query: 204 EIKEG-TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT 255
EI G TV++ + + F ND++ TG ++ +T LT+S+ T
Sbjct: 1994 EILTGATVSITGNFKSGEDILAFANDSSTMGDLTGSYDSATGVLTLSSSGGVT 2046
>ref|NP_758130.1| P35 lipoprotein homolog [Mycoplasma penetrans HF-2]
Length = 382
Score = 39.7 bits (91), Expect = 0.055
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 36/147 (24%)
Query: 176 ADNATKAVETLKNSIKLEGSL-VVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSN- 233
AD K LK+ + LEG+L + T+ ++ T TL + K F N N
Sbjct: 46 ADQTQKVTPVLKDDVSLEGALNKIYDTSTTDRKNTNTLIADDIKANPENYFTNGAELKNV 105
Query: 234 ------------------------KKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQ 269
TG W+D T+T+TI +K LV+ + +
Sbjct: 106 ISDATVTVDGKFSNASWASGLSYDATTGNWKDDTTTVTIQDSNK----LVYASSS----K 157
Query: 270 QYNTAGTSLEGSASEIKNLSELKNALK 296
Q N TSL+G +E++ LKNAL+
Sbjct: 158 QINI--TSLDGLKTELEKTDVLKNALE 182
>ref|NP_781157.1| putative S-layer protein/N-acetylmuramoyl-L-alanine amidase
[Clostridium tetani E88]
Length = 1080
Score = 39.3 bits (90), Expect = 0.072
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 33/173 (19%)
Query: 64 KIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE---------GSKPD------- 107
+I ++++K S+ K +L+ Q++L G + GS T+E G+K +
Sbjct: 484 EIRLNEDKVSADKIELKEGDTQIKLSGVENVRTGSNTIEINDKLKDAYGNKIEDELRVTF 543
Query: 108 -------KSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKL 160
K KV ++ D NT+ + ++ +S KV K++ + T K NK+ ++
Sbjct: 544 TASKDEVKPKVSHVLTVDDNTIRV----IYSKDVSEKVAKERNNYTLRDSKGNKVTIDEV 599
Query: 161 TRSNGTTLEY--SQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT 211
+ G T + S+ D T VE + I L G+ V+ T IK VT
Sbjct: 600 EKIAGDTYDVISSEKLDGSKYTLKVEDV---IDLAGN-VMDDYTATIKGSEVT 648
>ref|YP_253080.1| hypothetical protein SH1165 [Staphylococcus haemolyticus JCSC1435]
Length = 2156
Score = 39.3 bits (90), Expect = 0.072
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 20/208 (9%)
Query: 67 VSKEKNSSGKYDLRATIDQVELKGTSDK--NNGSGTLEGSKPDK-------------SKV 111
V+K K ++ IDQ D+ NNG + +P+ +K
Sbjct: 1731 VAKSKVDEEVTKAKSAIDQATTNDQVDQGNNNGHTAIAPIQPETIKKPEAKQAIDEVAKA 1790
Query: 112 KLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYS 171
K + T E DA+ K+ +VTK++ I + + ++ +D K +NG
Sbjct: 1791 KKDLIDQTPNATKEEKDAAKSKVDEEVTKEKKEIDQASTNSD-VDQVKDKGTNGINSVVV 1849
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
++ D A KA++ L + K E + +E + K +++++ K D
Sbjct: 1850 EVVKKDAAKKAIDELVKAKKSE----IDNNHNATREEKDSAKSKVDEEAKKAKDNIDKGA 1905
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLV 259
+N + ++S+S + TK V
Sbjct: 1906 TNNDVDQAKNSSSNIIKKIQPDTTKKTV 1933
Score = 33.9 bits (76), Expect = 3.0
Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 9/185 (4%)
Query: 107 DKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGT 166
D + K ++ T E DA+ K+ +VTK + +I KAN + ++NGT
Sbjct: 1401 DAATAKKAAIDQVSDATQEEKDAAKAKVDEEVTKAKSAID----KANTNNDVDQAKTNGT 1456
Query: 167 TLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFL 226
T+ S +A +A + + ++ + + +E + E+ K K +
Sbjct: 1457 TIISSIEPEAIKKAEAKQAIDVAVSAKKQEIDNNENAIQEEKDAAKTKVDEEATKAKAAI 1516
Query: 227 NDTAGSN-KKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQ----YNTAGTSLEGS 281
+ + +N K T+ +I + K + D +T ++ N T E
Sbjct: 1517 DQASTNNGVDQAKTSGETTISSIQPEVVKKAEAKQAIDDAVTAKKAEIDQNQEATKEEKD 1576
Query: 282 ASEIK 286
A++ K
Sbjct: 1577 AAKAK 1581
Score = 33.5 bits (75), Expect = 4.0
Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSS-GKYD 78
G + + + + +N +AKQ + + SL N N +EK+ + K D
Sbjct: 832 GVDEVQAHSISSINNIQPEIVKKSDAKQAIDTAVLNQKSLVNNNNEATQEEKDVALAKID 891
Query: 79 -----LRATIDQVELKGTSDK--NNGSGTLEGSKPDKSK-------------VKLTVSAD 118
+A D D+ NN + + G PD K K +
Sbjct: 892 EAAKQAKAATDAATTNNAVDEATNNNTTIISGILPDTVKKAAARKAIDDAATAKKEAINN 951
Query: 119 LNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADN 178
+ T E DA+ K+ + VT + +IT+ T N +D ++ + ++ T ++T
Sbjct: 952 TSDATQEEKDAAIAKVDAAVTAAKQAITQATTNDN-VDQEQNSGTSTITGIQPEVTKKAA 1010
Query: 179 ATKAVE 184
A KA++
Sbjct: 1011 ARKAID 1016
Score = 33.1 bits (74), Expect = 5.2
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 15/180 (8%)
Query: 67 VSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS--------KVKLTVSAD 118
V+KEK + + +DQV+ KGT+ N S +E K D + K K + +
Sbjct: 1817 VTKEKKEIDQASTNSDVDQVKDKGTNGIN--SVVVEVVKKDAAKKAIDELVKAKKSEIDN 1874
Query: 119 LNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADN 178
+ T E D++ K+ + K + +I ++ N +D K + SN ++ Q D
Sbjct: 1875 NHNATREEKDSAKSKVDEEAKKAKDNI-DKGATNNDVDQAKNSSSN--IIKKIQ-PDTTK 1930
Query: 179 ATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK 238
T +TL + K + + K KE K E++K D A SN K
Sbjct: 1931 KTVVKQTLLDQAKAK-KAEIDKDNKATKEEKDAAKAEVDKIIDKANKAIDNANSNDDVDK 1989
>ref|YP_193900.1| putative mucus binding protein [Lactobacillus acidophilus NCFM]
Length = 2310
Score = 39.3 bits (90), Expect = 0.072
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 47/226 (20%)
Query: 33 NLEDSSKKSHQNAKQDLPAVTEDS-VSLFNG--NKIFVSKEKNSSGKYDLRATIDQVELK 89
N +DS+K ++ +A+ +V E S +S N NK S+E+NS D TID +
Sbjct: 89 NTDDSTKTNNVSAQNTQESVDESSDISSDNAQQNKAITSEEQNS----DAAVTIDNNQ-- 142
Query: 90 GTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET 149
+D+N A QK++ K TK + ++
Sbjct: 143 -AADENK--------------------------------AETQKVTDKTTKTK---QDDN 166
Query: 150 LKANKLDSKKLTRSNGT-TLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEG 208
+ +D+KK + T T + + + N+ + + NSI + K+ +++ E
Sbjct: 167 KSSQTIDNKKSSEKAATDTSNKNNVEQSANSVENNANIDNSIAANTQTDITKSNIQLNES 226
Query: 209 TVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
++ + ++GK V NDT K G S + A+ K
Sbjct: 227 LPSI-AQAGQNGKTIVKDNDTTTQELKIGDLSSDLSGDALKANLTK 271
>ref|NP_665365.1| hypothetical protein SpyM3_1561 [Streptococcus pyogenes MGAS315]
Length = 1275
Score = 38.9 bits (89), Expect = 0.094
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ I+ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 263 EDITITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 320
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 321 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 380
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 381 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 417
>ref|NP_801568.1| hypothetical protein SPs0306 [Streptococcus pyogenes SSI-1]
Length = 1277
Score = 38.9 bits (89), Expect = 0.094
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ I+ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 265 EDITITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 322
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 323 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 382
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 383 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|NP_603198.1| Hemolysin [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 1881
Score = 38.9 bits (89), Expect = 0.094
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 30/262 (11%)
Query: 52 VTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGS-KPDKSK 110
+ E+++++ +G K S + ++ + +D L T+ SG L+ S S
Sbjct: 289 LAENAINIKSG-KTSNSGQIRANNNITINGNVDSSNLIFTNKDITISGNLKNSGNVSSSN 347
Query: 111 VKLTVSADLNTVTLEAFDASNQKISS-KVTKKQGSITEETLKANKLDSKKLTRSNGTTLE 169
+ + + N V +E +K+SS K+T +E K N +S KL N T +
Sbjct: 348 LNVKEIENSNKVVVE------EKLSSTKITNLGNLSAKEIEKTNIFNSGKLFSKNITAKD 401
Query: 170 YSQITDADNATKAVETLKNSIK------LEGSLVVGKTTVEIKEGTVTLKREIEKDGKVK 223
+ + + L+NS K + + +V KT EI + ++ G +
Sbjct: 402 FKNNGEVSSENLTTTNLENSNKINVKENINSNSIVNKTNAEITSKNLN-TNNLDNRGNIT 460
Query: 224 VFLNDTAGSNKKTGKW--------EDSTSTLTISADSKKTKDLV-----FLTDGTITVQQ 270
+ N ++G GK ++ T+T T+ + K+ + L+D +T
Sbjct: 461 IINNVSSGVIANNGKLLVGNTINSQNLTNTATVQGKTLDIKNKINSSGKILSDNILTKDI 520
Query: 271 YNTAGTSLEG-SASEIKNLSEL 291
+++ S + + E+ N E+
Sbjct: 521 FSSGNISAKVITTQELINSGEI 542
Score = 38.5 bits (88), Expect = 0.12
Identities = 50/211 (23%), Positives = 87/211 (41%), Gaps = 29/211 (13%)
Query: 56 SVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV 115
S ++ N IFV+ S + I+ +EL S +N G+ T++ ++
Sbjct: 549 SNNINNSKNIFVNGNLKISNNLNNSGVIEGLELNTNSIENTGNITIKNKLTSQNLNNKKN 608
Query: 116 SADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITD 175
+A++N L+ + KISS G+I T+K N LD N + + +T
Sbjct: 609 TANVNAGFLDV----HNKISS-----VGNIKAITMKTNNLD-------NSGNILTNSLTT 652
Query: 176 ADNATKAVETLKN----SIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
A+N K T KN ++ GS++ TV +T I + K+ + +
Sbjct: 653 AENINKGSITAKNISNQNLVNSGSVISDNITV---ADNITNTNNIFANEKISA--DKISN 707
Query: 232 SNKKTGKWEDSTSTLT----ISADSKKTKDL 258
SNK K + T + ++ K KD+
Sbjct: 708 SNKLVAKNTEITKLTNDGNIVVKENLKAKDI 738
Score = 37.7 bits (86), Expect = 0.21
Identities = 50/239 (20%), Positives = 94/239 (39%), Gaps = 44/239 (18%)
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETL 150
TSD N +G ++ K K + D ++ + + + + + + + L
Sbjct: 788 TSDIKNNNGIIQAIKNINIKTSNDLKLDGKYTANDSLNINAKSLENNGNLENDGKIKFNL 847
Query: 151 KANKLDSKKLTRSNGTTLEYSQITDAD-----NATKAVETLKNSIKLEGSLVVGKTTVEI 205
N +++ K++ S+ + ++I++ + + NS+K EG+L+ G+ +E
Sbjct: 848 TGNLINNNKISSSSNLNITANEISNNGVNSIIGSEANLTITANSLKNEGNLLFGE-GIEN 906
Query: 206 K---EGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT 262
K G +T I GK+K+ D K S + LTI +S K L++ T
Sbjct: 907 KLKTTGNITNTGVISSLGKLKIEAKDVVND-----KHIISDNDLTIDVNSITNKGLLYST 961
Query: 263 D--------------------GTITVQQYNTAGTSLEGS----------ASEIKNLSEL 291
+ G IT+ N T+ G A +IKNL+E+
Sbjct: 962 NNMKVDFKENFLNDKAEIYSSGDITINSENGTFTNRVGDIESERNIRIVAKDIKNLAEV 1020
>ref|NP_607878.1| hypothetical protein spyM18_1868 [Streptococcus pyogenes MGAS8232]
Length = 1275
Score = 38.9 bits (89), Expect = 0.094
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ I+ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 263 EDITITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 320
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 321 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 380
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 381 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 417
>ref|YP_599207.1| Putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS10270]
Length = 1277
Score = 38.9 bits (89), Expect = 0.094
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ I+ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 265 EDITITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 322
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 323 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 382
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 383 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|YP_535439.1| hypothetical protein LSL_0547 [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 709
Score = 38.9 bits (89), Expect = 0.094
Identities = 42/180 (23%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 122 VTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATK 181
++L+ A I K++ + +E L+ NK +++ +S L +++ DN K
Sbjct: 51 ISLQNEYAKLVNIKEKISNEGEESQKEELERNKKSLERVEKS----LHETELQWNDNHRK 106
Query: 182 AVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEK-DGKVKVFLNDTAGSNKKTGKWE 240
++ K+ +E + K V K+ + +KR++E+ D KVK+ D K+ E
Sbjct: 107 LIQAKKDLNNVEEVSNIEKKQVNAKDSSEIIKRDVERADRKVKISYEDWMRKKKEIESTE 166
Query: 241 DSTSTLTISADSK-----KTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNAL 295
+ SK K KD + TD + Q +LE + K EL++ L
Sbjct: 167 KDIAQCKNDISSKKKQLEKEKDKLPTTDKLVKEVQ-KKIDKNLENIDTVQKQKDELQSIL 225
>ref|YP_132040.1| hypothetical methyl-accepting chemotaxis protein [Photobacterium
profundum SS9]
Length = 542
Score = 38.9 bits (89), Expect = 0.094
Identities = 55/283 (19%), Positives = 115/283 (40%), Gaps = 28/283 (9%)
Query: 24 IGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATI 83
+ + K +++ L+ ++ NA++D T + +F +S +S + ++ +
Sbjct: 161 LAAAKSDEIVLKSERSQAFSNAERDTLMYTATIILIFGFIGFLISHLISSYIRTNIATVV 220
Query: 84 D--------QVELKGTSDKNNGSGTLEGSKPDKSKVKL-TVSADLNTVTLEAFDASNQKI 134
+ K T+D+ + G +K+ KL ++ D+N++T E AS+
Sbjct: 221 KGMLKLEQGDLSYKVTNDQGKNELSQLGKSYNKTLDKLRSLINDINSITKELLTASSDLA 280
Query: 135 SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ--ITDADNATKAVETLKNSIKL 192
SS +G+I + + +L + + T E +Q I+ AD A KA E + I +
Sbjct: 281 SSAAQTSKGAIKQ--TEQLELTATAMLEMTATVTEVTQNTISAADAAIKADEYSDSGINV 338
Query: 193 -----EGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLT 247
V+ ++ + TL +E + + L+ G T+ L
Sbjct: 339 VKVMNNDITVLSDDITQVSDVISTLAQETK---NINTILDTIKGI-------ATQTNLLA 388
Query: 248 ISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
++A + + + ++ +S +GSASEI + E
Sbjct: 389 LNAAIEAARAGEQGKGFAVVAEEVRNLASSTQGSASEISEMIE 431
>ref|NP_357880.1| Hyaluronate lyase precursor (hyaluronidase/hyase) [Streptococcus
pneumoniae R6]
Length = 1078
Score = 38.5 bits (88), Expect = 0.12
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGT-TLEYSQITDADNATKAVETLKNSIKLEGSLVV 198
K+ S T + L + + + KL +N T T++++ A K+ LK+ I GS +
Sbjct: 755 KRADSDTGKVLPSAFVGTSKLDDANATATMDFTNWNQTLTAHKSWFMLKDKIAFLGSNIQ 814
Query: 199 GKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK-WEDSTSTLTISADSKKTKD 257
+T T +R++E KV++ND S + K + ++ S S+DSKK
Sbjct: 815 NTSTDTA--ATTIDQRKLESSNPYKVYVNDKEASLTEQEKDYPETQSVFLESSDSKKNIG 872
Query: 258 LVFLTDGTITVQQ 270
F +I++ +
Sbjct: 873 YFFFKKSSISMSK 885
>ref|NP_269809.1| hypothetical protein sharing similarity with several eukaryotic
proteins [Streptococcus pyogenes M1 GAS]
Length = 1275
Score = 38.5 bits (88), Expect = 0.12
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ ++ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 263 EDVTITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 320
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 321 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 380
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 381 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 417
>ref|NP_207323.1| cag pathogenicity island protein (cag7) [Helicobacter pylori 26695]
Length = 1927
Score = 38.5 bits (88), Expect = 0.12
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 12/134 (8%)
Query: 51 AVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSK 110
A D+ + + N I+ S E + + +Y+ TI L+ K L G+K D K
Sbjct: 1558 ATNVDADKIASDNPIYASIEPDIAKQYETEKTIKDKNLEAKLAK-----ALGGNKKDDDK 1612
Query: 111 VKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEY 170
K S T EA A N KI V + +I+E LK K S + NG ++
Sbjct: 1613 EKSKKS------TAEA-KAENNKIDKDVAETAKNISEIALKNKKEKSGEFVDENGNPIDD 1665
Query: 171 SQITDADNATKAVE 184
+ + + T V+
Sbjct: 1666 KKKAEKQDETSPVK 1679
Score = 32.3 bits (72), Expect = 8.8
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 19/178 (10%)
Query: 27 QKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQV 86
+ + DL +++SKK+ Q++ QDL + + + N + + + K SS + T Q
Sbjct: 130 ETQTDLIDDETSKKTQQHSPQDL---SNEEATEANHFENLLKESKESSDHHLDNPTETQT 186
Query: 87 ELKG----------TSDKNNGSGTLEGSKPDK--SKVKLTVSADLNTVTLEAFDASNQKI 134
G S+ N S + GS DK K + V + D Q++
Sbjct: 187 NFDGDKSEETQTQMDSEGNETSESSNGSLADKLFKKARKLVDNKKPFTQQKNLDEETQEL 246
Query: 135 SSKVTKKQGSITEETLKANKLD---SKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
+ + ++ EET + + +D SKK + + L + T+A++ ++ K S
Sbjct: 247 NEEDDQENNEYQEET-QTDLIDDETSKKTQQHSPQDLSNEEATEANHFENLLKESKES 303
>ref|YP_815805.1| hyaluronate lyase precursor [Streptococcus pneumoniae D39]
Length = 1067
Score = 38.5 bits (88), Expect = 0.12
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGT-TLEYSQITDADNATKAVETLKNSIKLEGSLVV 198
K+ S T + L + + + KL +N T T++++ A K+ LK+ I GS +
Sbjct: 744 KRADSDTGKVLPSAFVGTSKLDDANATATMDFTNWNQTLTAHKSWFMLKDKIAFLGSNIQ 803
Query: 199 GKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK-WEDSTSTLTISADSKKTKD 257
+T T +R++E KV++ND S + K + ++ S S+DSKK
Sbjct: 804 NTSTDTA--ATTIDQRKLESSNPYKVYVNDKEASLTEQEKDYPETQSVFLESSDSKKNIG 861
Query: 258 LVFLTDGTITVQQ 270
F +I++ +
Sbjct: 862 YFFFKKSSISMSK 874
>ref|YP_282893.1| putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS5005]
Length = 1275
Score = 38.5 bits (88), Expect = 0.12
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ ++ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 263 EDVTITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 320
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 321 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 380
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 381 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 417
>ref|YP_060840.1| Putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS10394]
Length = 1277
Score = 38.5 bits (88), Expect = 0.12
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ ++ VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+
Sbjct: 265 EDVTITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKD 322
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 323 AVKDLAEKLQVIKDSYKEIKDSKLLDDTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 382
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 383 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|NP_981779.1| LPXTG-motif cell wall anchor domain protein [Bacillus cereus ATCC
10987]
Length = 3242
Score = 38.1 bits (87), Expect = 0.16
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Query: 61 NGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLN 120
+ NK+ ++ +K ++ Y++ + TS KNN + + K + +TVS +
Sbjct: 533 SSNKLNIAFKKETNKAYEIEYATKITDESVTSFKNNAKVSSKNQKDVSANATVTVSRGTH 592
Query: 121 TVTLEAFDASNQKISSKVT--------KKQGSITEETL-KANKLDSKKLTRSNGTTLEYS 171
++ Q I +T KK ++ ++ L K++K+D + N + +
Sbjct: 593 LAKNSRYNPKTQTIEWTITFNGDQRDIKKADALLKDVLDKSHKVDKNSIVVKNASYDDAG 652
Query: 172 QITDADNAT 180
++ DNAT
Sbjct: 653 KLVTGDNAT 661
>ref|YP_656990.1| cell surface glycoprotein precursor [Haloquadratum walsbyi DSM
16790]
Length = 988
Score = 38.1 bits (87), Expect = 0.16
Identities = 51/262 (19%), Positives = 104/262 (39%), Gaps = 37/262 (14%)
Query: 31 DLNLEDSSKKSHQNAKQDLPAVTEDSVSLFN-----GNKIFVSKEKNSSGKYDLRATIDQ 85
DL+ D+++ + D A +SL N G + + + + G + ++
Sbjct: 370 DLDFGDATRSTTVTIASDRNA----ELSLGNDEATQGENVGFTIDNSPEGSFHA-VVVES 424
Query: 86 VELKGTSDKNNGSGTLE--GSKPDKSKVK-----LTVSADLNTVTLEAFDASNQKISSKV 138
+ + D NN G D V L + D+ +A D+ N + +
Sbjct: 425 SDFRDNIDANNADNIFREVGDTEDSGIVSPGGDVLEIGTDIGAT--DAVDSDNVAYAFAI 482
Query: 139 TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGS--- 195
+ G ++ +D +T T+ +Q D+ ++ N ++LE +
Sbjct: 483 VEIDGGNGVGGIETQFIDDTSVTVDLYTSSSTAQTPYLDSNNNHIDA--NLVELESNGNI 540
Query: 196 ---------LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWE----DS 242
++ G+ ++E + T + EIE +G +++ A + G +E D
Sbjct: 541 QTDDDQDLDVLEGEVSLENPDNTYIVNSEIELNGTTAPGVDEVAIYARDQGDYELVQIDG 600
Query: 243 TSTLTISADSKKTKDLVFLTDG 264
+ T+T+ AD+ ++D V LTDG
Sbjct: 601 SDTVTVDADNTFSEDDVSLTDG 622
>ref|YP_378932.1| Parallel beta-helix repeat [Chlorobium chlorochromatii CaD3]
Length = 20646
Score = 38.1 bits (87), Expect = 0.16
Identities = 52/228 (22%), Positives = 93/228 (40%), Gaps = 25/228 (10%)
Query: 61 NGNKIFVSKEKNSSGKYDLRATIDQVELKGTS--DKNNGSGTLEGSKPDKSKVKLTVSAD 118
+GN +V+ S G AT+ V L+ TS D + S PD + +T S+
Sbjct: 15498 SGNIRYVATTTLSLGTI---ATLGNVSLQATSITDSADDDAVQLSSLPD---IDVTASSL 15551
Query: 119 LNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKL---DSKKLTRSNGTTLEYSQITD 175
T+ F + + I + + G++ L ++ +T T+E +++TD
Sbjct: 15552 RVQTTVNGFGEATKHIETTI----GTLAATLGTIGNLFVTETNDITIDTVDTIEVNRVTD 15607
Query: 176 ADNATKAVET---LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGS 232
A + T +++T L + G +V+ T + +K G T I G + LN +G+
Sbjct: 15608 AGSITNSIQTDNALSDIATGSGHVVIDATDITVKGGGDT--TGITTTGAGNILLNARSGN 15665
Query: 233 NKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEG 280
T ++++A V L + T T GT+ EG
Sbjct: 15666 ITAQAIINGGTGNISLNAVGTNLNGNVVLWNTTSA-----TNGTAFEG 15708
Score = 34.7 bits (78), Expect = 1.8
Identities = 57/256 (22%), Positives = 100/256 (39%), Gaps = 26/256 (10%)
Query: 48 DLPAVTEDSVSLFNGNKIFVSKEKNSS-GKYDLRATIDQV-ELKGTSDKNNGSGTLE--- 102
D + + +++ NG I N + G D R +D+ L SD G++
Sbjct: 14525 DAITMVDGAIAQTNGGNIRYQASGNVTVGLLDARLAVDRGGSLTKQSDATTPWGSVSIIS 14584
Query: 103 -GSKPDKSKVKLTVSA-DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKA--NKLDSK 158
S D S+ + V A +L A A S+ + + ++T N L+S
Sbjct: 14585 GASILDNSENTVDVYAKELRLTATGAIGALGDGTSNALDTEVATVTASAGVGGINLLEST 14644
Query: 159 KLTRSNGTTLEYSQITDADNATKAVET-------LKNSIKLEGSLVVGKTTVEIKEGTVT 211
LT T + +++ A +T + + +GS+VV + G +T
Sbjct: 14645 ALTIGTVTAVPVNRVATTGVAGNGNQTDALIQAGIVTTTGSDGSIVV------VSGGAMT 14698
Query: 212 LKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS---KKTKDLVFLTDGTITV 268
+ + DG V L D G+ + T +T+ A +K +F T GTI V
Sbjct: 14699 MSNVVTSDGSGNVRL-DVTGTLTHESAVDAGTGNVTLYATGLIEQKAAGDIFTTAGTIDV 14757
Query: 269 QQYNTAGTSLEGSASE 284
+ A T L+G+ ++
Sbjct: 14758 ESTAGAITMLDGAVAQ 14773
Score = 34.3 bits (77), Expect = 2.3
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 24/161 (14%)
Query: 65 IFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTL 124
IF+ + + YD + + +NGS +L+ S K +TVS TV L
Sbjct: 16371 IFLQAKAKQTTTYD-------ITIGAAVTSSNGSISLDASNDIKQNSTITVSGGSGTVDL 16423
Query: 125 EA-FDASNQKISSKV-----------TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ 172
A D Q+ +S + T GSIT ET+ A + L +N T
Sbjct: 16424 LAGHDIVMQQTTSSISTSASNGNILLTATSGSITIETINAGS-GNVALYAANATN---GF 16479
Query: 173 ITDADNA-TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
I D D+A V+ N + L+ +G T ++ TL
Sbjct: 16480 IYDGDDAGDSEVDITANGLILKAGNAIGSGTNHLETTVTTL 16520
Score = 33.9 bits (76), Expect = 3.0
Identities = 46/238 (19%), Positives = 93/238 (39%), Gaps = 30/238 (12%)
Query: 72 NSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
N SG L+ T +++ G+ T+ + + +T+S D T+ +EA DA+N
Sbjct: 16841 NGSGNILLKTTSGLLDINAAVKSGKGNITIWNTTGAIEQDAVTISTDGGTIDIEAMDATN 16900
Query: 132 QKIS----SKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDA---DNATKAVE 184
I+ S + T+ ++ +T N + + + + D +
Sbjct: 16901 GSITMVAGSTIVSDGALATDGNIRIKSGADMSITGINAGSAHVNLLAGSFIKDIGETTTD 16960
Query: 185 TLKNSIKLEGSLVVGK---TTVEIKEGTVTLKREIEKDGKVKVFLN-------DTAGSNK 234
+ N +++E VG+ T + + +VT + ++LN DT +
Sbjct: 16961 VVANHLRIEAGSWVGEASGTNFGLLDISVT---RLSVRAGNSMYLNELSDITIDTTDAIT 17017
Query: 235 KTGKWEDSTSTLTISADSKKTK--------DLVFLTDGTITVQQ--YNTAGTSLEGSA 282
D + ++ D+K++ ++V + G+IT NT G +EG A
Sbjct: 17018 VKRVLADGSVLNSVETDAKQSDLVTTANDGNIVLVAGGSITFNDGTANTNGAGVEGIA 17075
>ref|YP_424228.1| hypothetical protein MCAP_0241 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 556
Score = 38.1 bits (87), Expect = 0.16
Identities = 69/296 (23%), Positives = 112/296 (37%), Gaps = 59/296 (19%)
Query: 26 SQKENDLNL-------EDSSKKSH-QNAKQDLPAVTEDSVSLFNGNKIF---VSKEKNSS 74
S K NDL + E ++ S +N KQ + + +L N KI +++ KNSS
Sbjct: 203 SNKNNDLKILTTDFEKEITNNNSQIRNTKQSISVLESQHSNLLNEIKILNNQLNQIKNSS 262
Query: 75 GKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQ-- 132
LK + NN +E + K+ NT+T D N
Sbjct: 263 N------------LK-LQEINNLKKQIENNNKKLEKLNNKTLEITNTLTKLGNDNQNNND 309
Query: 133 ---KISSKVTKKQGSITEETLKANKLDS--KKLTRSNGTTL-EYSQIT--------DADN 178
K++ + Q SI E T + L + KK+T+ N L E S+++ + +N
Sbjct: 310 LIDKLTKVLQNNQNSIKEITNNNSILTNNLKKVTQKNQQILSEISKLSKLIEIKESELNN 369
Query: 179 ATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK 238
TK +ET KNS++ + + D K+K+ +N + + +
Sbjct: 370 KTKELETKKNSLQ------------------ALISTNSDNDNKLKLLINTNSENQNQITS 411
Query: 239 WEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNL-SELKN 293
T TL D K K + N ++ S E +NL SE+ N
Sbjct: 412 LVSQTKTLDNLIDIAKQKREQLTQRLRELASEENDLDKQIKKSTLEKQNLESEINN 467
>ref|YP_699541.1| hypothetical protein CPR_2265 [Clostridium perfringens SM101]
Length = 753
Score = 38.1 bits (87), Expect = 0.16
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 46/272 (16%)
Query: 18 QKGAESIGSQKENDLNL-------EDSSKKSHQNA---KQDLPAVTEDSVSLFNGNKIFV 67
+ G + I S+KE N E K+ + N+ K + + E++ FN N I +
Sbjct: 100 EDGYKKISSEKEESQNKIFKKAYKEYIIKQLNPNSEVIKNEKVFLLENNKVKFNNNLIKM 159
Query: 68 -----SKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE-GSKPD---KSKVKLTVSAD 118
+KEKN G YD+ T+ + K S+ + +G L + PD K ++ L + +
Sbjct: 160 DKEDKNKEKNEEGNYDI--TLIDINNKKVSNGSGLNGILNFKTIPDDDKKEEISLRLDSK 217
Query: 119 LNTVTLEAFDASNQKIS----SKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQIT 174
N L+ D + + +S +V G+ E + S L +
Sbjct: 218 FNVKELDG-DKNYKDVSLTFNIEVPDYNGAYKIEEFPLYNVCSNGLVVGENLNVGTGSTL 276
Query: 175 DADN----ATKAVETLKNSI-----KLEG-SLVVGKTTVEIKEGTVTLKREIEKDGKVKV 224
+ D + V+ K +I K EG +V+ T+ + G++ K +I G+
Sbjct: 277 NVDGGIFVSANVVKEKKFTIGSMVNKKEGDGVVINGGTLSVNNGSLVSKNDIRLGGE--- 333
Query: 225 FLNDTAGSNKKTG-KWEDSTSTLTISADSKKT 255
GSN K G + E++ S L ++ +SKK+
Sbjct: 334 ------GSNLKVGCETENNKSNLNLNDESKKS 359
Score = 34.7 bits (78), Expect = 1.8
Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 35/246 (14%)
Query: 24 IGSQKEND---LNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKE---KNSSGKY 77
+G + EN+ LNL D SKKSH N +L T + NG+KI K+ N Y
Sbjct: 339 VGCETENNKSNLNLNDESKKSHSNLNNNLGVYTGNLG--INGDKIGFDKDVSKGNIISNY 396
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
+ A D + L G N + G ++++ +LT + ++ + D S
Sbjct: 397 PVYAMNDLI-LNGEKSSINLNEGFYGINSNRTEDELTGKINNSSAIIVNTDDIGSGSSIN 455
Query: 138 V-------------TKKQGSITEETLK------ANKLDSKKLTRSNGTTLEYSQITDADN 178
+ TK + T E++ A +D+ + L+ +++ D
Sbjct: 456 IGQEAIIMGTAYINTKPEAYQTGESVSVKGNYIAYTVDNGNVEFKYYNPLQLAKLDSVDE 515
Query: 179 ATK----AVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNK 234
K ++ K +I L+G + TT GT E++ + K N T S
Sbjct: 516 KAKYFKDNIKNAKGTIHLDGISLPDNTT---SIGTTISNNEVKLNNKNANLDNITDISIN 572
Query: 235 KTGKWE 240
+ K+E
Sbjct: 573 QVEKYE 578
>ref|YP_248929.1| HMW2A, high molecular weight adhesin 2 [Haemophilus influenzae
86-028NP]
Length = 1542
Score = 38.1 bits (87), Expect = 0.16
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 54/272 (19%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNS-SGKYDLRATIDQVELKGTSDK 94
D+S K H+ L V+ G+K+ V + +G T D + + GT
Sbjct: 869 DNSIKGHKKKTLTLGNVSTSGNLSLTGSKVEVKGDLAVLNGATFKGETNDSLNITGTFTN 928
Query: 95 NN--------GSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK------------- 133
N G ++G +K + +T +A N T+ + +N+K
Sbjct: 929 NGTADINIKRGVVNIQGDITNKGGLNITTNAQKNQKTIINGNITNKKGNLNITNNGNDTE 988
Query: 134 --ISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIK 191
I +++K+G++T + K N +K++T G + S + A +A ++T +K
Sbjct: 989 IQIGGNISQKEGNLTISSDKVNI--TKQITIKAGVDEKDSSSSTASDANLTIKT--KELK 1044
Query: 192 LEGSLVVG---KTTVEIKEGT-VTLKREIEKDG----KV--------KVFLND------- 228
L L + K + K+G+ +T+ DG KV K+ ND
Sbjct: 1045 LVEDLNISGFNKAEITAKDGSDLTIGNTNSADGTNAKKVTFNQVKDSKISANDHNVTLNS 1104
Query: 229 ---TAGSNKKTGKWEDSTSTLTISADSKKTKD 257
T+G+ TG + + LTI+A + + K+
Sbjct: 1105 KVETSGNTDNTGDGSGNNAGLTIAAKNVEVKN 1136
>ref|NP_774564.1| hypothetical protein bll7924 [Bradyrhizobium japonicum USDA 110]
Length = 2734
Score = 37.7 bits (86), Expect = 0.21
Identities = 50/216 (23%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 82 TIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKK 141
T+D V + GT +N S L+ + K ++ A NT TLE A+
Sbjct: 1056 TLDGVTVSGTDITDNSSIELDNTVKLKEGARIQGGAVANTGTLEIAGAAT---------L 1106
Query: 142 QGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKT 201
I T K+D + +GT + I + A + + K++G+ + K
Sbjct: 1107 LNDILTNTSHVIKIDDGQTLTLSGTEITGGTIDNYSGAQGGAIDVTGNSKIDGNATLNKG 1166
Query: 202 TVEIKEG-TVTLK------REIEKDGKVKV---------FLNDTAGSNKKTGKWEDSTST 245
TV ++ G T+TL I G VKV + T G+ +G DS+
Sbjct: 1167 TVTVENGVTLTLDDATIAGATIGNGGTVKVDPGKKLTLAGASLTGGALSVSGTL-DSSGA 1225
Query: 246 LTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGS 281
TI+ + + L+ G +T+ +A + G+
Sbjct: 1226 TTITDAAITSNGLIEAVGGLLTLATMTSATIANAGT 1261
>ref|YP_601153.1| Putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS2096]
Length = 1277
Score = 37.7 bits (86), Expect = 0.21
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 138 VTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIK--L 192
VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+++K
Sbjct: 271 VTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKDAVKDLA 328
Query: 193 EGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKTGKWEDS 242
E V+ + EIK+ + LK IE +V +N+ T G+ N K K
Sbjct: 329 EKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKANKENSE 388
Query: 243 TSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
S++ A K+ K LV DGT+ + NTA
Sbjct: 389 ESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|YP_597265.1| putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS9429]
Length = 1277
Score = 37.7 bits (86), Expect = 0.21
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 138 VTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIK--L 192
VTKK G I + K + + ++ T+ + TTLE + I +AD A A E+ K+++K
Sbjct: 271 VTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLEKA-IKEAD-AIIAKESNKDAVKDLA 328
Query: 193 EGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKTGKWEDS 242
E V+ + EIK+ + LK IE +V +N+ T G+ N K K
Sbjct: 329 EKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKANKENSE 388
Query: 243 TSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
S++ A K+ K LV DGT+ + NTA
Sbjct: 389 ESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|YP_535766.1| Fibronectin-binding protein / Fibrinogen-binding protein
[Lactobacillus salivarius subsp. salivarius UCC118]
Length = 562
Score = 37.7 bits (86), Expect = 0.21
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 25 GSQKENDLNLEDS--SKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGK------ 76
G ++N L L D + +H A D A+TED + NGN + + N +GK
Sbjct: 204 GISRDNALALADKLHTSNNHVQAFNDFLAMTEDPIPTMNGNNFSIFTD-NPNGKKFTTLS 262
Query: 77 ------YDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
Y +A D+V+ +G + L+ +K K+ + A T + +
Sbjct: 263 EMLDVFYHTKANRDRVQQQGGQLLHVIRKNLQRNKKKLKKLSNELKA---TENADEYRIK 319
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
+ +++ + + + +T+ TL ++K++T S L SQ +A K + LKN++
Sbjct: 320 GEVLTTYLYQIKRGMTKITLPNFYDNNKEITISLSNQLSPSQ--NAQKYFKKYQKLKNAV 377
>ref|YP_699841.1| phage infection protein, putative [Clostridium perfringens SM101]
Length = 721
Score = 37.7 bits (86), Expect = 0.21
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G SI +N NL ++SK+S S F+ ++ +S+ + S K +
Sbjct: 240 GLNSISKNTDNTGNLINNSKESLN--------------STFDNIRLNLSESQTSLNK--I 283
Query: 80 RATIDQVE-LKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV 138
++ +D++ + + + + S + +KV +++ N + + +N+KI++ +
Sbjct: 284 QSNLDELSSIASDASSAKINSLISKSINEINKVDNSITVVTNFLDVINKKNNNEKIANMI 343
Query: 139 TKK---QGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVE-TLKNSI 190
T Q S+ EE K N L SK +NG L+ ++ + TK +E L NS+
Sbjct: 344 TSLKNIQNSLAEEKTKLNDLQSKV---NNGKDLDKGLLSSISDLTKKIEGQLDNSL 396
>ref|YP_417060.1| iron-regulated surface protein [Staphylococcus aureus RF122]
Length = 617
Score = 37.7 bits (86), Expect = 0.21
Identities = 57/255 (22%), Positives = 91/255 (35%), Gaps = 40/255 (15%)
Query: 61 NGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLN 120
NG K V K K+ S DL +V KNN + PDK+ V +
Sbjct: 303 NGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDTKNNSRTLIFPYIPDKAVYNAIVKVVVA 362
Query: 121 TVTLEA---FDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
+ E NQ I +K + T E L NG T++ +T D
Sbjct: 363 NIGYEGQYHVRIINQDIKTKDDDTSQNNTSEHL-------------NGQTVQEDNVTATD 409
Query: 178 NAT-KAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSN--- 233
AT ++ET + L+ ++ + +K+ ++ ++ D L+D +G+
Sbjct: 410 TATNNSIETTPREATDKVDLIEPESDM-VKDADSSVDKDAHHDVD---HLSDMSGNTHFD 465
Query: 234 ------------KKTGKWEDS----TSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTS 277
K T K D+ +S + DS K KD V D + N GT
Sbjct: 466 KYDLKEMDTQIAKDTDKGVDNSVGMSSNVDTDKDSNKNKDKVIQLDHIADKNKVNNTGTE 525
Query: 278 LEGSASEIKNLSELK 292
+ +S +K
Sbjct: 526 TNIDTMKYHPISTIK 540
>ref|YP_696787.1| hypothetical protein CPF_2364 [Clostridium perfringens ATCC 13124]
Length = 1081
Score = 37.4 bits (85), Expect = 0.27
Identities = 70/298 (23%), Positives = 115/298 (38%), Gaps = 45/298 (15%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
K A G D L++ + K ++N ++ V ED+ L + F + + +
Sbjct: 396 KDAALKGDYLTYDEYLKNENSKEYKNRPYNVKEVLEDN--LLGDAQNFRTVLGLETPSLE 453
Query: 79 LR-ATIDQVELKGTSD----KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK 133
++ A +D+ + +SD KN S T+ G + K ++ + + + K
Sbjct: 454 IKSAVMDKDLILESSDESYLKNIKSITINGGIKELDKSLYSIKDNQLIINSKVVKGDKIK 513
Query: 134 ISSKVTKKQGSITEETLKANKLD-SKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKL 192
IS T + + E L+ D S KL + T + +++ K + NSIKL
Sbjct: 514 ISISATGYKDKVIETKLEKILDDISLKLEKEYKTGEDVIVTGLSEDFIKNI----NSIKL 569
Query: 193 EGSLVV--------GKTTVEIKEGTVTLKREIEKD-------------GKVKVFLNDTAG 231
+G L++ G T EI E +TLK + K+ GK + N T G
Sbjct: 570 DGKLLLTKEQGGSSGNTYYEISENKLTLKSGLFKEDKNYKLEIDSKYYGKKEFEFNITKG 629
Query: 232 SNKKTGKWE-----DSTSTLTISADSKKT----KDLVFLTDGTITVQQYNTAGTSLEG 280
K K E + + DSK T D+ FL G N G S+ G
Sbjct: 630 DEKSNEKTEIIEEKKELPKIDVKIDSKSTFMKKYDIKFLNSGEWI---NNITGVSVNG 684
>ref|NP_562046.1| phage-related hypothetical protein [Clostridium perfringens str.
13]
Length = 933
Score = 37.4 bits (85), Expect = 0.27
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 34/285 (11%)
Query: 31 DLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKG 90
DL+ + S++K + ++ ++SV N SKE K ELKG
Sbjct: 80 DLDKQKSTQKDLSSKIEETTRKYKESVEATGKN----SKESKELAK----------ELKG 125
Query: 91 TSD---KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS-SKVTKKQGSIT 146
+ +N + +K + ++ KL S +A + N+++ SK+ K +
Sbjct: 126 LKEDYAQNTKAIETNTTKLNNAETKLNNSKKALLENKKALEEVNKELEKSKLDKFTEGLG 185
Query: 147 EETLKANKLDSKKLTRSN-----GTTLEYSQITDADNATKAVETLKNSIKLEG------- 194
+ KA+K+ +K S GT Y+++ D L + L+G
Sbjct: 186 KAGEKASKISNKMKPASVAITGLGTAAGYAEMKFEDGVANINTLLDDQSHLDGYKNKVIE 245
Query: 195 -SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSK 253
S GK+ +I +G T I G+ + +T + K G E + + ISA K
Sbjct: 246 VSNDTGKSLEDITDGMYTCISSIGDGGEETAKIFETMAKSAKAGGAETNDAVALISAGMK 305
Query: 254 KTKDLVFLTDGTITVQQYNTAG---TSLEGSASEIKNLSELKNAL 295
+ T I+ + TA T+ AS +K L L + L
Sbjct: 306 GYNKVNNETAKQISDLAFQTAKLGVTTFPEMASSMKPLFPLSSTL 350
>ref|YP_042074.1| putative serine rich repeat containing protein [Staphylococcus aureus
subsp. aureus MRSA252]
Length = 1351
Score = 37.4 bits (85), Expect = 0.27
Identities = 53/272 (19%), Positives = 103/272 (37%), Gaps = 20/272 (7%)
Query: 21 AESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR 80
++S+ N ++ +S +S A T DS+S+ N S + S
Sbjct: 908 SQSVSDSTSNSISTSESLSES---------ASTSDSISISNSIANSQSASTSKSDSQSTS 958
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++ + K S + S + S + + S ++T + ++ S S T
Sbjct: 959 ISLSTSDSKSMSTSESLSDSTSTSDSVSGSLSIATSQSVSTSSSDSMSTSEMISDSMSTS 1018
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLE--YSQITDADNATKAVETLKNSIKLEGSLVV 198
GS+ K+ + S T +G+T E I+ +D+ +K +L S GS
Sbjct: 1019 --GSLAASDSKSMSVSSSMSTSQSGSTSESLSDSISTSDSDSK---SLSLSTSQSGST-- 1071
Query: 199 GKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDL 258
T+ T + + + T+ S + DS S T S++S ++ +
Sbjct: 1072 -STSTSTSSSVRTSESQSTSGSMSASQFDSTSISTSFSDSTSDSKSASTASSES-ISQSV 1129
Query: 259 VFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
T G+ + + SL S S+ ++S+
Sbjct: 1130 STSTSGSTSGSTSTSTSESLSMSGSDSTSVSD 1161
>ref|NP_245651.1| Hsf [Pasteurella multocida subsp. multocida str. Pm70]
Length = 2712
Score = 37.4 bits (85), Expect = 0.27
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 31/195 (15%)
Query: 61 NGNKIFVSKEKN----SSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVS 116
+GNK+ +KN ++G + L + + L D G+GT K +K +T++
Sbjct: 1261 DGNKLTTIADKNIGVIANGDHTLEVRLAKT-LSNLKDATFGTGT---DKTTINKDGMTIT 1316
Query: 117 ADLNTVTLEAFDASN--QKISSKVT--KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ 172
NTV+L +N KI++ + ++ + L K + LT +G T++ +
Sbjct: 1317 NGANTVSLTEGGLNNGGNKITNVAAGQNETDAVNVKQLNDLKAEGFGLTGEDGQTVKQAL 1376
Query: 173 ----------------ITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREI 216
+TDAD + K L+N + L G G +G +TLK +
Sbjct: 1377 GTAIKVTGDDNVKTKIVTDADGSKKLEIGLENQVTLGGEAKNGNPAA---DGKLTLKNQA 1433
Query: 217 EKDGKVKVFLNDTAG 231
D V N T G
Sbjct: 1434 GTDKVVLDGANGTVG 1448
>ref|NP_758120.1| hypothetical protein MYPE7300 [Mycoplasma penetrans HF-2]
Length = 1126
Score = 37.4 bits (85), Expect = 0.27
Identities = 70/303 (23%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
SI + + N N + +++ N+ AVT++S G+ I NS K T
Sbjct: 441 SIYNNRVNTTNSSTITVENNPNSYGLAIAVTQNSTQQDQGDFIGFLNGTNSFQKAS-DFT 499
Query: 83 IDQVELKG---TSDKNNGSGTLEGS---KPDKSKVKLTVSADLN---TVTLEAFDAS--N 131
ID L + N TL S + D + K+T D+N TVT + + +
Sbjct: 500 IDNSVLSSKIPSEITKNDITTLNNSFLKENDSNGFKVTTIDDVNGSITVTCDLYQIPWFS 559
Query: 132 QKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYS---------QITDAD----- 177
+ S V+ + IT+ NK+++K ++ T+ +Y Q+ D +
Sbjct: 560 STLPSDVSPRV--ITKTFNTTNKINNKVSWKTLSTSTDYDFLNMVPSKVQVADINALDPF 617
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEI-----KEGTVTLKREIEKDGKVKVFLNDTAGS 232
A+ +T+ NS G+ + KTT I G +T+K E + ++ + +
Sbjct: 618 QASFQSQTVTNS---SGTQLYPKTTYSITSTNDNNGQITIKAVYEY-----IPMSASLSN 669
Query: 233 NKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELK 292
++ K ++T+T TI S T +N G + S +I+N+++LK
Sbjct: 670 LSQSVKTYEATTTYTIFNKSN-------------TTPSFNFMGANSNNSTVDIRNVAQLK 716
Query: 293 NAL 295
N L
Sbjct: 717 NLL 719
>ref|NP_784025.1| cell surface protein precursor [Lactobacillus plantarum WCFS1]
Length = 1006
Score = 37.0 bits (84), Expect = 0.36
Identities = 52/206 (25%), Positives = 80/206 (38%), Gaps = 23/206 (11%)
Query: 103 GSKPDKSKVKLTVSA---DLNTVTLEAFDASNQKISSKVTKKQGSI--------TEETLK 151
G + D +K TVSA N VT D K + V K + E TL+
Sbjct: 582 GYQIDTAKHVFTVSAAQATANVVTGSVVDKRIAKTALTVNKVWADVPAGVQTPTVEVTLQ 641
Query: 152 AN--KLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGT 209
N + +LT +NG T +S + D A + G + T+ E T
Sbjct: 642 RNGQAYQTLQLTSANGYTGTFSDLDVTDVYGNAYTYTVIETAIAGYISSQTTSGE----T 697
Query: 210 VTLKREIEKDGKVKVFLNDTAGSNKKTG-----KWEDSTSTLTISADSKKTKDLVFLTDG 264
VTL + GK+ V D++G+N+ G K T ++ D+ L LT G
Sbjct: 698 VTLTNTYQT-GKLTVIKTDSSGANRLAGAVFAVKNAAGTLVAQLTTDATGQAQLTGLTQG 756
Query: 265 TITVQQYNTAGTSLEGSASEIKNLSE 290
TV + L + +++ L+E
Sbjct: 757 AYTVSEIQAPDGYLINTQAQVLVLNE 782
>ref|YP_877681.1| hypothetical protein NT01CX_1600 [Clostridium novyi NT]
Length = 746
Score = 37.0 bits (84), Expect = 0.36
Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 61 NGNKIFVSKEKNSSGKY-----DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV 115
NG+K+ V +K+ KY D I++ K + N G KP+K K +++
Sbjct: 509 NGDKLNVF-DKSKYFKYICEDEDYSELINKGNNKKDKNNNMEKGVYINWKPNK-KNDISI 566
Query: 116 SADLNTVTL--EAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI 173
A ++ L ++ NQ I KV EET + K +KK N T + I
Sbjct: 567 GAIVSKGNLYESTYNLDNQ-IQDKVKAVTEMYKEETSEKKKFINKKEIVENYETKNLTNI 625
Query: 174 TDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSN 233
+ + + E K K E S+V I +G +T+ + + G + V N T +
Sbjct: 626 IIKNKSVCSKELEKLLSKDEASIV-------IIDGDLTVDSDFKFTGILIVTENLTINNG 678
Query: 234 KKTGKWEDSTSTLTISADSKKTKDLVFLTDG 264
K ED + + D+ K +F+ DG
Sbjct: 679 GKLDITEDKEGIMNLIWDNYKILKDIFVDDG 709
>ref|YP_959861.1| flagellin domain protein [Marinobacter aquaeolei VT8]
Length = 497
Score = 37.0 bits (84), Expect = 0.36
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query: 111 VKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEY 170
+ ++ S D TV + A A+ + I++++ K + ++ L+ S T+
Sbjct: 205 ITISSSLDEQTVNITASGATAESIAAEINKAAETTGVSASARTSVELSNLSASGTVTMSL 264
Query: 171 SQITDADNATKAVETLK----NSIKLEGSLVVGKT--TVEIKEGTVTLKREIEKDGKVKV 224
S D +NAT + + + E + GKT T E+ GT+ L +E KD ++
Sbjct: 265 ST-GDGNNATVSAQISDVNDLEPLAREINASSGKTGITAEVDGGTIKLIQESGKDVVIEG 323
Query: 225 FLNDTAGS 232
F ++ AGS
Sbjct: 324 FTSNGAGS 331
>ref|YP_280985.1| putative Fe3+-siderophore transport protein [Streptococcus pyogenes
MGAS6180]
Length = 1277
Score = 37.0 bits (84), Expect = 0.36
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 132 QKISSKVTKKQGSITEETLKANK---LDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+ ++ VTKK G I + K + + ++ T+ + TTL+ + I +AD A A E+ K+
Sbjct: 265 EDVTITVTKKDGQIHFVSAKQKQHVTAEDRQSTKLDVTTLKKA-IKEAD-AIIAKESNKD 322
Query: 189 SIK--LEGSLVVGKTTVEIKEGTVT------LKREIEKDGKVKVFLND-TAGS---NKKT 236
++K E V+ + EIK+ + LK IE +V +N+ T G+ N K
Sbjct: 323 AVKDLAEKLQVIKDSYKEIKDSKLLADTHRLLKDTIESYQAGEVSINNLTEGTYTLNFKA 382
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
K S++ A K+ K LV DGT+ + NTA
Sbjct: 383 NKENSEESSMLQGAFDKRAK-LVVKADGTMEISMLNTA 419
>ref|YP_446728.1| flagellin [Salinibacter ruber DSM 13855]
Length = 414
Score = 37.0 bits (84), Expect = 0.36
Identities = 57/282 (20%), Positives = 115/282 (40%), Gaps = 38/282 (13%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY 77
Q+ +IG K + L++ + S N Q + E +V NG+ +S+ + ++
Sbjct: 64 QQALRNIGDAK-SALSVAEGGLDSQLNILQ---SAREKAVQAANGS---LSQNERNAIAG 116
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
+L+ + ++ + NG +EG S + ++ + + + FD + + +++
Sbjct: 117 ELQEQVGEINDIAKNTTFNGDKLIEGGTSGDSGNSVGLTFQTGSESDQTFDVNIENSTAE 176
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
Q ++ T + + TRS T I+ + + T TL+ G+
Sbjct: 177 DLGVQSNLDVTTTDGQDVSAGDFTRSQAVTAASGNISPSASGTNLAGTLEG-----GTFD 231
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
V TVE ++TLK +G G N G + STS +T+S+D+ K
Sbjct: 232 V---TVERSGTSLTLK----ANGSTVSAAGTNGGGN---GTFTGSTS-VTLSSDTSGNKI 280
Query: 258 LVFLT---------------DGTITVQQYNTAGTSLEGSASE 284
+ +T D ++ V+ G+ L+G +S+
Sbjct: 281 ALNVTELSVRKGDITDGGSKDFSVQVRDSENIGSRLQGGSSD 322
>ref|YP_311286.1| phage protein-related [Shigella sonnei Ss046]
Length = 1029
Score = 37.0 bits (84), Expect = 0.36
Identities = 53/284 (18%), Positives = 104/284 (36%), Gaps = 23/284 (8%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY- 77
K +E+ S ++ + E ++K S NA + + + N K + E N+
Sbjct: 230 KASEAATSARDASASKE-AAKSSETNASSSASSAASSATAAANSAKAAKTSETNARSSET 288
Query: 78 ------DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
A S + +G S K + ++ +T T +A +A+
Sbjct: 289 AAGQSASAAAGSKTAAASSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEATE 348
Query: 132 QKISSKVTKKQGSITEETLKAN--KLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
Q ++ + +E KA+ + +S K ++ + S + A +A+K E + +
Sbjct: 349 QATAAARSASAAKTSETNAKASETRAESSKTAAASSASSAASSASSA-SASKD-EATRQA 406
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS 249
+GS T G+ T + + + +TA + ED S + +
Sbjct: 407 SAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAK-----RAEDIASAVALE 461
Query: 250 ADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
S K +V L+ T N+ SL + +K +L N
Sbjct: 462 DASTTKKGIVQLSSAT------NSTSESLAATPKAVKAAYDLAN 499
>ref|YP_193148.1| hypothetical protein LBA0222 [Lactobacillus acidophilus NCFM]
Length = 282
Score = 37.0 bits (84), Expect = 0.36
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
DL+ I +GT +G+ T K + SKV TVS++ T + + +SK
Sbjct: 97 DLKYWIPASATEGTVTYKSGNKTYT-LKSNGSKVTTTVSSNKKTTSSK---------NSK 146
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI---TDADNATKAVETLKNSIKLEG 194
TK + + K+ K D+K ++S TT + + T ++ K+ T K +
Sbjct: 147 TTKSSKTSESTSKKSTKSDTK--SKSTSTTKKETATKSDTSKSDSKKSTSTKKATSSKST 204
Query: 195 SLVVGKTTVEIKEGTVTLKRE---IEKDGK-VKVFL 226
+ K +V IK +T+K +K+GK VK +L
Sbjct: 205 NKTTSKKSVTIKPVKITMKNRAYVYDKNGKRVKDYL 240
>ref|NP_347459.1| Predicted membrane protein [Clostridium acetobutylicum ATCC 824]
Length = 1116
Score = 37.0 bits (84), Expect = 0.36
Identities = 58/270 (21%), Positives = 103/270 (38%), Gaps = 27/270 (10%)
Query: 37 SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNN 96
+SKK Q+ D +D+V N K+ + K +N + + T + E++ +
Sbjct: 276 ASKKEAQDKFIDAHKKLDDAVVKLNDGKVQLQKNQND---FKTQITSAENEIQNKKSEIQ 332
Query: 97 GSGTLEGSK-PDKSKVKLTVSADLNTVTLEAFDASNQKIS-----SKVTKKQGSITEETL 150
S T+ SK D K K T+ N + L + NQK + S K S + L
Sbjct: 333 QSETIINSKLADAQKSKSTLEGAENQIVLGQQNLDNQKHAAAEGISAALGKAVSDAKNNL 392
Query: 151 KANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEG-----SLVVGKTTVEI 205
K N D N Y++ E+LK+S LE + K +
Sbjct: 393 KNNPSDITCKEIYNNLNDVYTKDIQGKEFDDMYESLKSSNSLEKISSYFDIKGAKAKFDS 452
Query: 206 KEGTVTLKREIEKDGKVKVFLNDTAGSN--KKTGKWEDSTSTLTISADSKKTKDLVFLTD 263
+ ++ K++ +D + + + N + +D + +SKK + L
Sbjct: 453 AQSEISSKKQTIQDNEKALISGEVQLQNALNQINAGKDKIAKGETELNSKKNEGL----- 507
Query: 264 GTITVQQYNTAGTSLEGSASEI-KNLSELK 292
++ N A ++ S EI +N +LK
Sbjct: 508 -----EKLNAAKRKIDDSEKEINENTEKLK 532
>ref|NP_868817.1| probable threonine/tyrosine-specific protein kinase [Rhodopirellula
baltica SH 1]
Length = 1922
Score = 36.6 bits (83), Expect = 0.47
Identities = 46/229 (20%), Positives = 92/229 (40%), Gaps = 27/229 (11%)
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV 138
L T+D V+L T D+ N + PD + L + + T++ D + + S V
Sbjct: 46 LSETVDHVDLYATLDEGNIIPVAPSNDPDATVADLDKTVEETDQTVQDTDQTIIENSLTV 105
Query: 139 TKKQGSITEETLKANKLDSKKLTRS----NGTTLEYSQITDADNATKAVETLKNSIKLEG 194
T +I + + + ++ + + T LE Q N T ETL + ++
Sbjct: 106 TDADATIADASSTVSDVNETVAEDADFDPDETLLEADQTVSDSNVTVVDETLND---VDA 162
Query: 195 SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSK- 253
++ TV E TV L +++ + + T +N KT + + + TI D
Sbjct: 163 TVQESDLTVVETEATVDLNATLDETAEKTI---PTIHANSKTREDANEATEGTILTDEDI 219
Query: 254 ---------KTKDLVFLT-------DGTITVQQYNTAGTSLEGSASEIK 286
++D+ + + G TV ++ G+++ GS+ ++
Sbjct: 220 GQTINPRELTSEDVSYWSKLSQEFHTGAATVASFSEFGSAVAGSSLPLR 268
>ref|YP_050296.1| hypothetical protein ECA2203 [Erwinia carotovora subsp. atroseptica
SCRI1043]
Length = 317
Score = 36.6 bits (83), Expect = 0.47
Identities = 47/191 (24%), Positives = 72/191 (37%), Gaps = 23/191 (12%)
Query: 68 SKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLT----VSADLNTVT 123
+KEKN+ Y +R QV++ S + + + K + + T +D
Sbjct: 146 AKEKNADSFYIVR----QVDVNSNSANQKVTAYIYKADAPKRQTQSTDVIPADSDAGRAA 201
Query: 124 LEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAV 183
L A A K+ GS + + S K R T + +QI + +NAT A
Sbjct: 202 LAAGGAEAAKVEIPGVANSGSPSRNVGNFFETQSSKGGRYTVTLSDGTQIQELNNATAAQ 261
Query: 184 ETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDST 243
+SI+ G+ ++ E KR EK K T +WE
Sbjct: 262 MVPFDSIQFRGNYT---NMTQVSEAVA--KRAGEKGAKYY----------HVTRQWEGKG 306
Query: 244 STLTISADSKK 254
+ LTISAD K
Sbjct: 307 NNLTISADLYK 317
>ref|NP_696509.1| probable solute-binding protein of ABC transporter for peptides
[Bifidobacterium longum NCC2705]
Length = 544
Score = 36.6 bits (83), Expect = 0.47
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 19/182 (10%)
Query: 54 EDSVSLFNGNKIFVSKEKNS----------SGKYDLRATIDQVELKGTSDKNNGSGTLEG 103
+D + NGN + S K S +G L A ++ V + K++ + +
Sbjct: 104 KDGLKFANGNDLTASDVKFSYDRIKKINDPNGPSSLLANVESV-----TAKDDTTVVFKD 158
Query: 104 SKPDKSKVKLTVSADLNTVTLE-AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTR 162
S P +K +S+ + E FDA + + K+ TL A K++
Sbjct: 159 SVPFDVTLKQVMSSPAGPIVDEDTFDADKLTDADTIVSKKAFAGPYTLTAFKINESAAYA 218
Query: 163 SNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKV 222
N + Y +T A N+ V+ ++ L+ ++ G+ V + + T ++ KD KV
Sbjct: 219 KNDS---YKGLTPAKNSAVQVKYFADASNLKMAVQQGQIDVANRSLSPTDIEDLSKDSKV 275
Query: 223 KV 224
KV
Sbjct: 276 KV 277
>ref|YP_719366.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 3554
Score = 36.6 bits (83), Expect = 0.47
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 24/220 (10%)
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
D++ T +++ + ++ N + T+ ++ K+K+ ++ DASN +
Sbjct: 1482 DVQGTTNEINVTNSTTNNKKTFTVALAEDIKTKLNGALTETTANNKYAKVDASNITADTW 1541
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
TK EET +++ K T +NGT ++ + D T V ++ G++
Sbjct: 1542 RTKLNVYSKEET--TTEINKAKETVTNGTGIDVTASNGNDPKTFTVALNSDTQAKLGNIG 1599
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK--T 255
G+ + TVT KV A KTG + +T+T ++ D+ K T
Sbjct: 1600 TGEVSATENNKTVT-------GAKV-----HNAIEAAKTGLYA-NTATFGLTDDNSKSVT 1646
Query: 256 KDLVFLTDGTITVQQYNTA---GTSLEGSASEIKNLSELK 292
K L + TI+++ +TA GT++ S N S LK
Sbjct: 1647 KKL----NETISIKGSSTAKSGGTNISVSVDSESNTSGLK 1682
>ref|NP_645334.1| Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein
[Staphylococcus aureus subsp. aureus MW2]
Length = 1347
Score = 36.6 bits (83), Expect = 0.47
Identities = 58/265 (21%), Positives = 99/265 (37%), Gaps = 37/265 (13%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ ++ ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ E +PD + K V+A + DA + + V
Sbjct: 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNAQPTNEENKKVDAKTESTTLNVKSDAIKS 197
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNA---TKAVETLKNSIKLEGSLVVGKTT 202
ETL N +S ++ L S N AV+ K L+ TT
Sbjct: 198 NAETLVDNNSNSNNENNAD-IILPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTT 256
Query: 203 VEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS-A 250
+ + + + LK +I+ D KVK + T K+ D+ ++
Sbjct: 257 LTVVDADKNNKIVPAQDYLELKSQIKVDDKVK-------SGDYFTIKYSDTVQVYGLNPE 309
Query: 251 DSKKTKDLVFLTDG-TITVQQYNTA 274
D K D+ +G TI +++TA
Sbjct: 310 DIKNIGDIKDPNNGETIATAKHDTA 334
>ref|NP_373773.1| Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein
[Staphylococcus aureus subsp. aureus N315]
Length = 1385
Score = 36.6 bits (83), Expect = 0.47
Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 49/271 (18%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ ++ ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ EG +PD + K + V ++ + N+K+ +K ++
Sbjct: 138 KSTNEDLNTKQTISNQEGLQPDLLENK-------SVVNVQPTNEENKKVDAKTESTTLNV 190
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE---------GSL 196
+ +K+N ++ I A K++ T ++ L
Sbjct: 191 KSDAIKSNAETLVDNNSNSNNENNADIILPKSTAPKSLNTRMRMAAIQPNSTDSKNVNDL 250
Query: 197 VVGKTTVEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTST 245
+ TT+ + + ++LK +I D KVK + T K+ D+
Sbjct: 251 ITSNTTLTVVDADNSKTIVPAQDYLSLKSQITVDDKVK-------SGDYFTIKYSDTVQV 303
Query: 246 LTIS-ADSKKTKDLVFLTDG-TITVQQYNTA 274
++ D K D+ +G TI +++TA
Sbjct: 304 YGLNPEDIKNIGDIKDPNNGETIATAKHDTA 334
>ref|NP_371086.1| Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein
[Staphylococcus aureus subsp. aureus Mu50]
Length = 1385
Score = 36.6 bits (83), Expect = 0.47
Identities = 53/271 (19%), Positives = 104/271 (38%), Gaps = 49/271 (18%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ ++ ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ EG +PD + K + V ++ + N+K+ +K ++
Sbjct: 138 KSTNEDLNTKQTISNQEGLQPDLLENK-------SVVNVQPTNEENKKVDAKTESTTLNV 190
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE---------GSL 196
+ +K+N ++ I A K++ T ++ L
Sbjct: 191 KSDAIKSNAETLVDNNSNSNNENNADIILPKSTAPKSLNTRMRMAAIQPNSTDSKNVNDL 250
Query: 197 VVGKTTVEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTST 245
+ TT+ + + ++LK +I D KVK + T K+ D+
Sbjct: 251 ITSNTTLTVVDADNSKTIVPAQDYLSLKSQITVDDKVK-------SGDYFTIKYSDTVQV 303
Query: 246 LTIS-ADSKKTKDLVFLTDG-TITVQQYNTA 274
++ D K D+ +G TI +++TA
Sbjct: 304 YGLNPEDIKNIGDIKDPNNGETIATAKHDTA 334
>ref|YP_897353.1| possible periplasmic component of efflux system [Bacillus
thuringiensis str. Al Hakam]
Length = 352
Score = 36.6 bits (83), Expect = 0.47
Identities = 61/268 (22%), Positives = 107/268 (39%), Gaps = 41/268 (15%)
Query: 58 SLFNG--NKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS------ 109
S NG + +FV K ++ K D+ ++ +L ++ KN L+ + +KS
Sbjct: 81 SQINGVVSSVFV-KSGDTVKKGDILIQLENQDL--SNKKNELEAALKNFEMNKSMLEQLK 137
Query: 110 -KVKLTVSA---DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNG 165
+KL + D++ LE + A S +K+ + E K+N + S
Sbjct: 138 NSIKLNQDSFMDDIDKKFLEEYKAYEDGYKSLKLEKEDISSIEAYKSNAIVSINQRIQAI 197
Query: 166 TTLEYSQITDADNATKAVETLKNSIKLEG-----SLVVGKTTVEIKEGTVTLKREIEKDG 220
+ + + D+ K E LK +G S + ++ E V L EI+K
Sbjct: 198 DQEHFIKKQELDSINKQSELLKIQANKDGVVQFSSAIQKGDLIDANEELVALIPEIDKK- 256
Query: 221 KVKVFLN-----------------DTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTD 263
KVK++L+ + G++K+ GK T K TK+ V+ D
Sbjct: 257 KVKIYLSAQEIKGIRKGNQVQYAFNLKGADKQLGK---ITYISKYPIFDKNTKEYVYELD 313
Query: 264 GTITVQQYNTAGTSLEGSASEIKNLSEL 291
TI ++ N T + G A+ I S +
Sbjct: 314 ATINIKDTNELYTGMIGKAAVITGESSV 341
>ref|YP_794870.1| Cell surface protein [Lactobacillus brevis ATCC 367]
Length = 245
Score = 36.6 bits (83), Expect = 0.47
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 32/145 (22%)
Query: 90 GTSDKNNGSGTLEGSKPDKSKVK-----LTVSADLNTVTLEA-----FDASNQKISSKVT 139
GT + T +K D +K + L V + T+T++ F + K +SK T
Sbjct: 106 GTVKQATSGNTYTFTKVDLTKTQTIGFSLAVPMNGQTMTMQEAATLQFKTNTLKATSKTT 165
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
KK +++ + +KA +KK+ GTT + +++T N T +G
Sbjct: 166 KKAVALSTKRVKAA---AKKVC---GTTTKGAKVTVKHNQT----------------TLG 203
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKV 224
+TT + TV LK+ ++K K+KV
Sbjct: 204 RTTTKKTAYTVKLKKAVKKSWKLKV 228
>ref|YP_424445.1| lipoprotein, putative [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 723
Score = 36.6 bits (83), Expect = 0.47
Identities = 48/187 (25%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 25 GSQKENDLNLEDSSK--KSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY----- 77
G K D ++E S K + AK+ + + S+ L N NK F S E N + Y
Sbjct: 422 GFVKNKDSSIESLSGDLKITEEAKKAVAKINAPSL-LTNNNKGF-SSEINGNVDYVFVLP 479
Query: 78 ----DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK 133
DL ++ D ++K +NG G+ G + K +L + D E + N+
Sbjct: 480 IYLNDLFSSND-TQIKKQHSASNGGGSNGGEAQNGDKYELNIMQDTWVNLNEKYFLDNRY 538
Query: 134 ISS----KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
++ KVT K + L ANK + ++ NG++ ++ +DN+ K + K
Sbjct: 539 FNNINIKKVTPKNNG---DVLVANKDNKWYVSLKNGSSNREIEVEYSDNSKKTITLKKLE 595
Query: 190 IKLEGSL 196
K + SL
Sbjct: 596 EKDKKSL 602
>ref|YP_042648.1| putative surface anchored protein [Staphylococcus aureus subsp.
aureus MSSA476]
Length = 1365
Score = 36.6 bits (83), Expect = 0.47
Identities = 58/265 (21%), Positives = 99/265 (37%), Gaps = 37/265 (13%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ ++ ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKSIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ E +PD + K V+A + DA + + V
Sbjct: 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNAQPTNEENKKVDAKTESTTLNVKSDAIKS 197
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNA---TKAVETLKNSIKLEGSLVVGKTT 202
ETL N +S ++ L S N AV+ K L+ TT
Sbjct: 198 NAETLVDNNSNSNNENNAD-IILPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTT 256
Query: 203 VEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS-A 250
+ + + + LK +I+ D KVK + T K+ D+ ++
Sbjct: 257 LTVVDADKNNKIVPAQDYLELKSQIKVDDKVK-------SGDYFTIKYSDTVQVYGLNPE 309
Query: 251 DSKKTKDLVFLTDG-TITVQQYNTA 274
D K D+ +G TI +++TA
Sbjct: 310 DIKNIGDIKDPNNGETIATAKHDTA 334
>ref|YP_253081.1| hypothetical protein SH1166 [Staphylococcus haemolyticus JCSC1435]
Length = 2609
Score = 36.6 bits (83), Expect = 0.47
Identities = 60/268 (22%), Positives = 102/268 (38%), Gaps = 16/268 (5%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G +SI + + + +D +K + +NA + A + + + + K V+K K
Sbjct: 1676 GVDSINNVQPTVVK-KDEAKTAIENAARAKKAEIDQTPNATDEEKA-VAKAKVDEAVTTA 1733
Query: 80 RATIDQVELKGTSD--KNNGSGTLEGSKPD---KSKVKLTVSADLNTVTLEAFDASNQKI 134
+ IDQ D K NG + +P K + K + E N
Sbjct: 1734 KNAIDQATNNNGVDTAKTNGVDAINNVQPTVVKKDEAKTAIDKAAEAKKAEIDQTPNATD 1793
Query: 135 SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEG 194
K K + +E + K + T +NG S+ TDA N + V K+ K+
Sbjct: 1794 EEKAAAK--AKVDEAVNNAKASIDQATNNNGVDTAKSEGTDAINHVQPVVVKKDEAKVAI 1851
Query: 195 SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
+ EI + T E + K KV D A + T K +T D+ K
Sbjct: 1852 NKAAEAKKAEIDQ-TPNATDEEKAAAKAKV---DEAVT---TAKNAIDQATNNAGVDTAK 1904
Query: 255 TKDLVFLTDGTITVQQYNTAGTSLEGSA 282
T + + + TV + + A T++E +A
Sbjct: 1905 TNGVDSINNVQPTVVKKDEAKTAIENAA 1932
>ref|NP_267008.1| hypothetical protein L73264 [Lactococcus lactis subsp. lactis
Il1403]
Length = 1063
Score = 36.6 bits (83), Expect = 0.47
Identities = 49/271 (18%), Positives = 103/271 (38%), Gaps = 24/271 (8%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S+G+ N + +SS+ S + A + S S + N S E N+S
Sbjct: 598 SVGASTVNPNSSANSSQSSSSASSSSSAASSSTSSSNVSSNTSSNSSEANTSSS------ 651
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPD-----KSKVKLTVSADLNTVTLEAFDASNQKISSK 137
TS+ ++ S + EGS +S V + S D + + ++S+
Sbjct: 652 --------TSNASSSSSSSEGSSASSSNSSESSVASSSSVDSSQSSSAGVNSSSSSAEGS 703
Query: 138 VTKKQGSITEETLKANKLDSKKLTRS--NGTTLEYSQITDADNATKAVETLKNSIKLEGS 195
S ++ +DS + + + NG++ S+ + A ++ + ++ +S ++ S
Sbjct: 704 SASSSNSSESSVASSSSVDSSQSSSAGVNGSSSS-SESSSASSSNSSEGSVASSSSVDSS 762
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKK--TGKWEDSTSTLTISADSK 253
+ + + + GS++ TG S+S SA S
Sbjct: 763 QSSSAGVNSSSSSAEGSSASSSNSSESSIASSSSVGSSQSSSTGVSSSSSSAEGSSASSS 822
Query: 254 KTKDLVFLTDGTITVQQYNTAGTSLEGSASE 284
+ + + ++ Q ++AG + S+SE
Sbjct: 823 NSSESSVASSSSVDSSQSSSAGVNSSSSSSE 853
>ref|NP_348857.1| Protein shares with cyclomaltodextrin glucanotransferase C-terminal
domain [Clostridium acetobutylicum ATCC 824]
Length = 170
Score = 36.6 bits (83), Expect = 0.47
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 130 SNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
+N K SSK K SITE + K + +K++ +S T +Q D K + +K+
Sbjct: 11 TNTKSSSKTVKTSASITEASKKKSSAPTKRVAKSRATA--KNQTISNDKKPKKTKVVKSV 68
Query: 190 IKLEGSLVVGKTTVEIKE 207
++ + ++ KT+ I E
Sbjct: 69 DFVDVTFILNKTSTSIGE 86
>ref|NP_964984.1| hypothetical protein LJ1128 [Lactobacillus johnsonii NCC 533]
Length = 4734
Score = 36.6 bits (83), Expect = 0.47
Identities = 69/291 (23%), Positives = 106/291 (36%), Gaps = 49/291 (16%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNS----- 73
K AE+ G N++ + +K Q A ++L + S + + EKNS
Sbjct: 2879 KSAETAGLDNINNIAIPTLVQKQ-QEAIEELNVARDAKSSAIDNATDLTTDEKNSLKDKV 2937
Query: 74 SGKYD------LRATIDQVELKGTSDKNNGSGTLEGSK-PDKSKVKLTVSADLNTVTLEA 126
+Y AT D+ T+ K NG ++ + P KS K ++DLNT EA
Sbjct: 2938 QAEYSNAVSNITSATTDEAV---TTAKENGIAAIKDIQIPTKSPAKEQATSDLNTAVDEA 2994
Query: 127 FDASNQKISSKVTKKQGSITEETLKANK----LDSKKLTRSNGTTLEYSQITDADNATKA 182
+A +Q ++T+E +A K D+KK + DNAT
Sbjct: 2995 KNAIDQ---------DNNLTDEEKQAAKDQIDSDAKKAQEA------------IDNATTD 3033
Query: 183 VETLKNSIKLEGSLVVGK--TTVEIKEGTVTLKREIEKD---GKVKVFLNDTAGSNKKTG 237
E NS G L + K I K EI K + K LN+ K
Sbjct: 3034 DEV--NSAVDNGKLAIDKDIANAAIDNAVAGKKAEISKSSLTSEEKADLNNEVDQKAKDA 3091
Query: 238 KWEDSTSTLTISADSKKTKDLVFLTDGTI-TVQQYNTAGTSLEGSASEIKN 287
K +T + + + + + D + T A A+E KN
Sbjct: 3092 KEAIKAATTPETVTTAQENGIKNINDTKVPTESAAKEAAKKAVAEAAEAKN 3142
Score = 33.1 bits (74), Expect = 5.2
Identities = 56/282 (19%), Positives = 101/282 (35%), Gaps = 47/282 (16%)
Query: 33 NLEDSSKKSHQNAKQDLP-----AVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVE 87
N+ ++S S AKQ AV E + ++ + N KE + + DQ
Sbjct: 1963 NINETSVPSESAAKQAAKEAVAKAVDEKNAAIDSSNLTEEEKEALKQKVTEAQTAADQAI 2022
Query: 88 LKGTSD------KNNGSGTLEGSK-PDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
T++ + NG + G + P+KS K DLNT A K
Sbjct: 2023 DNATTNAGVTEAQTNGVNAINGIEVPNKSDAKEQAITDLNTAVDNA---------KKAID 2073
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQI-TDADNATKAVETLKNSIKLEGSLVVG 199
+ ++T+E +A K QI +DA NA A+ K + ++ + G
Sbjct: 2074 QDSNLTDEEKQAAK----------------DQIDSDAKNAQDAINNAKTNDDVKKAAYDG 2117
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKT---GKWEDSTSTLTISADSKKTK 256
++ + + GK N + +KT + + ++ + ++ T
Sbjct: 2118 TLAIDKDVANAAIDNAVA--GKKAEISNSSLTDEEKTALNNEVDQKANSAKDAINNATTP 2175
Query: 257 DLVFLTDG----TITVQQYNTAGTSLEGSASEIKNLSELKNA 294
+ V G I T T+ E + + +E KN+
Sbjct: 2176 EAVTTAQGNGIKNINATSVPTTSTAKEAAKKAVAEAAEAKNS 2217
Score = 33.1 bits (74), Expect = 5.2
Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 25/199 (12%)
Query: 95 NNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANK 154
+NG+ ++ + DK + + D N E +NQ ++ S + KA+
Sbjct: 53 DNGNKSVVANAQDKEQTDNKQNTDTNPQNNEDKTNNNQTQNTVTADLDHSTVGASYKADT 112
Query: 155 LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKR 214
++ + +S+ + E T T+ T + K + V K T E T T
Sbjct: 113 TNASEANKSSDKSDEKQAATTETAKTEEAATKEVEAKNTANDDVAKKTEEAAAKTDT--- 169
Query: 215 EIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
KV +N T N KT + T I + KT +
Sbjct: 170 --------KVDVNKTVVENVKTEAATPNVETRNIETQTAKTDE--------------EKV 207
Query: 275 GTSLEGSASEIKNLSELKN 293
T+++ ++S++KN E N
Sbjct: 208 ETAVDNTSSDLKNAVENAN 226
>ref|NP_297068.1| polymorphic membrane protein B/C family [Chlamydia muridarum Nigg]
Length = 1672
Score = 36.2 bits (82), Expect = 0.61
Identities = 38/166 (22%), Positives = 66/166 (39%), Gaps = 19/166 (11%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
P+VT + ++F+GN ++ SG TS K+ G + G+ S
Sbjct: 860 PSVTLNCQTVFSGNSASMATTNPPSG---------------TSPKDTIGGAIAGTTISLS 904
Query: 110 KVK--LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANK--LDSKKLTRSNG 165
K +ADL S+ ++ K+T GS T E KANK + G
Sbjct: 905 KTSHFSENTADLGAAIGTLSGGSSSNLTEKITLSNGSFTFEKNKANKRGVIYAPSVSIKG 964
Query: 166 TTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT 211
+ ++Q T + + T +I+ GS++ V ++ + T
Sbjct: 965 NNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTAEQASST 1010
Score = 33.1 bits (74), Expect = 5.2
Identities = 61/261 (23%), Positives = 91/261 (34%), Gaps = 34/261 (13%)
Query: 62 GNKIFVSKEKN-SSGKYDLRATIDQVELKGTSDKN--------NGSGTLEGSKPDKSKVK 112
G I +SK + S DL A I L G S N NGS T E +K +K V
Sbjct: 898 GTTISLSKTSHFSENTADLGAAIGT--LSGGSSSNLTEKITLSNGSFTFEKNKANKRGVI 955
Query: 113 LTVSADL--NTVTLEAFDASNQKISSKVTKKQ-----GSI--TEETLKANKLDSKKLTRS 163
S + N +T +++ + TK GS+ T + A + S
Sbjct: 956 YAPSVSIKGNNITFNQNTSTHDGSAIYFTKDATIESLGSVLFTGNNVTAEQASSTATGGQ 1015
Query: 164 NGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIK-----------EGTVTL 212
T Y D T+ +T I G++ + G V L
Sbjct: 1016 TTNTTNYGAAIFGDPGTQTTDTTLKLIASSGNITFSNNSQNTATNNPATKFCSISGYVKL 1075
Query: 213 KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTI--SADSKKTKDLVFLTDGTITVQQ 270
+ + GK F + S KKTG+ ++S TL I + +S V + V+
Sbjct: 1076 TLQAAQ-GKTISFFDSIRTSTKKTGQAQNSYETLDINKTENSNTYAGTVLFSSELHEVKS 1134
Query: 271 YNTAGTSLEGSASEIKNLSEL 291
Y L +K +EL
Sbjct: 1135 YVPQNVVLHNGTLVLKKNAEL 1155
>ref|NP_833065.1| hypothetical protein BC3326 [Bacillus cereus ATCC 14579]
Length = 238
Score = 36.2 bits (82), Expect = 0.61
Identities = 32/147 (21%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 26 SQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQ 85
++KE + + + + K +N K+ + TE + N+ +KEK ++GK + + T +
Sbjct: 59 TEKETNTSSNEKTDKDAKNTKES--SGTESNGKTSTQNENVKTKEKETTGKTNDQTTSGK 116
Query: 86 VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFD---ASN------QKISS 136
+ TS N +G + +K K V + + +++ D A+N K+
Sbjct: 117 TTDQSTSTSTNNNG--KTTKDPKKSVAVKTNVKEVVALIDSLDKQLAANPKLETVNKLGK 174
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRS 163
++ +K I +E ++ DSK + +S
Sbjct: 175 QINEKWDVIEKELEASHPTDSKTIGQS 201
>ref|NP_785782.1| hypothetical protein lp_2304 [Lactobacillus plantarum WCFS1]
Length = 295
Score = 36.2 bits (82), Expect = 0.61
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 18/157 (11%)
Query: 98 SGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDS 157
+G+ + D S V+++ S ++ +S S+K + K S E+T+KAN
Sbjct: 150 AGSSSSTSADSSSVQVSSSKKQSS-------SSKASSSAKSSSKASSAKEQTIKANGSSD 202
Query: 158 KKLTRSNG-----TTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
T +NG ++ ++ T +T + ++K +GS T+ + T+
Sbjct: 203 TAYTLTNGADKNKVVIKSTKAAWTSVTTNGTQTWQGTLKADGS-----HTLTLPSNATTV 257
Query: 213 KREIEKDGKVKVFLNDTA-GSNKKTGKWEDSTSTLTI 248
K + V +N A N K + T TLTI
Sbjct: 258 KFQFGNATATTVTINGKAFNFNPKNSTSQVRTITLTI 294
>ref|YP_448004.1| ComB2 [Methanosphaera stadtmanae DSM 3091]
Length = 234
Score = 36.2 bits (82), Expect = 0.61
Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 56 SVSLFNGNKIFVSKEKNSSGKYDL-RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLT 114
+VSLFN SK K+ + DL RA+ T +K T + K+K
Sbjct: 4 TVSLFN------SKTKDVAIVIDLLRASTTITIALNTFNKVIPVNTSNEAFELKNKYNAL 57
Query: 115 VSADLNTVTLEAFDASNQKISSKVTKKQGS--ITEETLKANKLDSKKLTRSNGTTLEYSQ 172
++ + N T+E FD +N +V K +G + + T L++ K N T L +
Sbjct: 58 LAGEDNLKTIEGFDITNS--PKEVQKHEGDVLVLKTTNGTRVLENTKNNNKNVTVLIGTG 115
Query: 173 ITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREI---EKDGKVKVFLNDT 229
I A KA+E I++ + K +E G + +EI KD + + L++T
Sbjct: 116 INANAVAKKALEIATEEIEIVMAGRHEKFNIEDATGAGVIVKEIIKSAKDQNIPLELDET 175
Query: 230 AGSNKKTGKWEDSTSTLTISADSKKTKDLV 259
A ++ ++ D K+ K+L+
Sbjct: 176 A------------LASTILAKDEKQVKELI 193
>ref|YP_207120.1| iron-regulated protein FrpC [Vibrio fischeri ES114]
Length = 3933
Score = 36.2 bits (82), Expect = 0.61
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 35/254 (13%)
Query: 51 AVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATID-----QVELKGTSDKNNGSGTLEGSK 105
A T D+ + G+ V +E +++G +T+D Q T + SG +G
Sbjct: 1400 AWTTDAPVVVEGDNSIVVRETDAAGNVSGSSTLDFVLDTQAPNAPTITLDTDSGISDGDL 1459
Query: 106 -PDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSIT-EETLKANKLDSKKLTRS 163
+ +T S D NTV +A D S +V + SIT ET A + S
Sbjct: 1460 LTNDGSFTVTPSEDGNTVEYQAADGSWSTTPPEVVEGDNSITVRETDAAGNV-------S 1512
Query: 164 NGTTLEYSQITDADNA-TKAVET---LKNSIKL--EGSLVVGKT----TVEIKEG----T 209
+TL++ T A NA T ++T + N L +GS V + TVE + +
Sbjct: 1513 GSSTLDFVLDTKAPNAPTITLDTDSGISNGDLLTNDGSFTVTPSEVGNTVEYQAADGSWS 1572
Query: 210 VTLKREIEKDGKVKVFLNDTAGSNKKTGKWE-------DSTSTLTISADSKKTKDLVFLT 262
T +E D + V D AG+ + + + T+T+ DS + +
Sbjct: 1573 TTPPEVVEGDNSIIVRETDAAGNVSGSNTLDFVLDTQAPNAPTITLDTDSGISNGDLLTN 1632
Query: 263 DGTITVQQYNTAGT 276
DG+ V T
Sbjct: 1633 DGSFIVTPSEVGNT 1646
>ref|YP_819388.1| Predicted membrane protein [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 721
Score = 35.8 bits (81), Expect = 0.80
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 12/146 (8%)
Query: 43 QNAKQDLPAVTEDSVSLFNGNKIFVSKEKN--SSGKYDLRATIDQVELKGTSDKNNGSGT 100
QN DL DS L K K K +SGKY + TI + K SGT
Sbjct: 69 QNIGDDLTKKLLDSKQL-KLTKTSAEKAKKGLASGKYYMTITIPKSFTKN-------SGT 120
Query: 101 LEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKK- 159
L +KP K ++K+ + + + ++ K+ + V+K + +T+ SKK
Sbjct: 121 LLDAKPVKPEIKIAHNTGQGFIAEKLTASAADKVQANVSKSLQGVYNKTILNATASSKKG 180
Query: 160 -LTRSNGTTLEYSQITDADNATKAVE 184
+ S G T S ++ + TK ++
Sbjct: 181 FQSGSKGATQLGSGLSQLQDGTKKLQ 206
>ref|NP_647375.1| zinc metalloproteinase aureolysin [Staphylococcus aureus subsp.
aureus MW2]
Length = 509
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|NP_602747.1| Serine protease [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 930
Score = 35.8 bits (81), Expect = 0.80
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 7/164 (4%)
Query: 52 VTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKV 111
+TE+ VS F N IF GK L T + +G+ K GTLE K +++
Sbjct: 364 ITENKVSYFE-NDIFGDGGLEKLGKGTLHLTGNNSYERGSIVKE---GTLEIHKIHANQI 419
Query: 112 KLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYS 171
+ + T+ L + K++S + IT + A LD+K + + GTT
Sbjct: 420 NVE---NKGTLVLHSKAIIGYKVNSNSVIDEKEITASNITAKNLDNKGIVKVTGTTAVIG 476
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKRE 215
A + + + +++ G + + + + T RE
Sbjct: 477 GDYIAHSGSTTEMDFSSKVRVLGKIDMQGGAITLSSNRYTTLRE 520
>ref|YP_268922.1| electron transport complex protein RnfC [Colwellia psychrerythraea
34H]
Length = 788
Score = 35.8 bits (81), Expect = 0.80
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 117 ADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDA 176
A +N T EA A + ++ K +++ + + +S+K ++ + SQ+ A
Sbjct: 494 AAMNKATPEATGAKSAVAAALARVKAKKASKDQSQVSTSNSQKDLPADSADDQKSQVAAA 553
Query: 177 DNATKAVETLKNSI--KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVF--------L 226
KA + LK K GS + + VE K + +K K+ L
Sbjct: 554 IARAKAKKKLKEEATQKQSGSDSIVDSAVEEKPASTEQVGTDDKKSKIAAAIAKAKAKKL 613
Query: 227 NDTAGSNKKTGKWEDSTSTLTISADSKKTK 256
N +A ++ ED++ T+S D KKTK
Sbjct: 614 NKSADASDSEKMTEDTSPEKTVSTDDKKTK 643
>ref|YP_187447.1| zinc metalloproteinase aureolysin [Staphylococcus aureus subsp.
aureus COL]
Length = 509
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|YP_501422.1| aureolysin, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 498
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 18 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 76
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 77 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 119
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 120 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 178
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 179 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 215
>ref|YP_852428.1| putative tail fiber protein [Escherichia coli APEC O1]
Length = 1035
Score = 35.8 bits (81), Expect = 0.80
Identities = 55/286 (19%), Positives = 102/286 (35%), Gaps = 27/286 (9%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY- 77
K +E+ S ++ + E ++K S NA + + + N K + E N+
Sbjct: 228 KASEAATSARDASASKE-AAKSSETNAASSASSAASSATAAANSAKAAKTSETNARSSET 286
Query: 78 ------DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
A S + +G S K + ++ +T T +A +A+
Sbjct: 287 AAGQSASAAADSKTAAALSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEAAV 346
Query: 132 QKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAV----ETLK 187
Q ++ + + +T K N S+ S+ T S + A +A+ A E +
Sbjct: 347 QASAA----ARSASAAKTSKTNAKASETSAESSKTAAASSASSAASSASSASASKDEATR 402
Query: 188 NSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLT 247
+ +GS T G+ T + + + +TA + ED S +
Sbjct: 403 QASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAK-----RAEDIASAVA 457
Query: 248 ISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
+ S K +V L+ T N+ SL + +K EL N
Sbjct: 458 LEDASTTKKGIVQLSSAT------NSTSESLAATPKAVKAAYELAN 497
>ref|YP_495206.1| zinc metalloproteinase aureolysin [Staphylococcus aureus subsp.
aureus USA300]
Length = 509
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|YP_540528.1| putative tail fiber protein [Escherichia coli UTI89]
Length = 1035
Score = 35.8 bits (81), Expect = 0.80
Identities = 55/286 (19%), Positives = 102/286 (35%), Gaps = 27/286 (9%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKY- 77
K +E+ S ++ + E ++K S NA + + + N K + E N+
Sbjct: 228 KASEAATSARDASASKE-AAKSSETNAASSASSAASSATAAANSAKAAKTSETNARSSET 286
Query: 78 ------DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
A S + +G S K + ++ +T T +A +A+
Sbjct: 287 AAGQSASAAADSKTAAALSASAASTSAGQASASATAAGKSAESAASSASTATTKAGEAAV 346
Query: 132 QKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAV----ETLK 187
Q ++ + + +T K N S+ S+ T S + A +A+ A E +
Sbjct: 347 QASAA----ARSASAAKTSKTNAKASETSAESSKTAAASSASSAASSASSASASKDEATR 402
Query: 188 NSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLT 247
+ +GS T G+ T + + + +TA + ED S +
Sbjct: 403 QASAAKGSATTASTKATEAAGSATAAAQSKSTAESAATRAETAAK-----RAEDIASAVA 457
Query: 248 ISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
+ S K +V L+ T N+ SL + +K EL N
Sbjct: 458 LEDASTTKKGIVQLSSAT------NSTSESLAATPKAVKAAYELAN 497
>ref|YP_424039.1| lipoprotein, putative [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 533
Score = 35.8 bits (81), Expect = 0.80
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 18/227 (7%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSK-EKNSSGK 76
+K AESI + ++EDS KK K+ LP + + + K +S + S
Sbjct: 267 RKLAESISEIETKIQSVEDSFKKEIDETKKWLPELDAEDKKIKEMKKELLSTYDVYDSFV 326
Query: 77 YDLRA----TIDQVELKGTSDKNNGSGT--LEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
Y+ R ++ + KNN +E + + K+K ++ +L +A A
Sbjct: 327 YNNRIENAFQLEYITSLDDDIKNNAETRKFIEELQSELEKIKKSLIEELKIKKDKADQAK 386
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITD-ADNATKAVETLKNS 189
N KV+ + S+ E + N+LD++ +N + D +NA E ++ +
Sbjct: 387 N-----KVSSLEASLKEMMSEKNELDTELNKINNEIVKIKRDLADFRNNALDLEEEIEKT 441
Query: 190 IKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKT 236
K+E K + E+ E L + ++ +++ L+D + +KT
Sbjct: 442 TKIE-----TKLSKELNEYETDLVKLSDEKAQIEKELDDLEKNTEKT 483
>ref|YP_447286.1| hypothetical protein Msp_0226 [Methanosphaera stadtmanae DSM 3091]
Length = 419
Score = 35.8 bits (81), Expect = 0.80
Identities = 59/242 (24%), Positives = 90/242 (37%), Gaps = 52/242 (21%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSV-SLFNGNKIFVSKEKNSSGK 76
QK E + QKE +KK Q AK+ VT+D+ ++ + K F +
Sbjct: 190 QKTQEKVKQQKE--------AKKEQQKAKEVAKKVTQDAAKTIKDAGKSFTQVLREQGLI 241
Query: 77 YD---LRATIDQVELKGTSDK---NNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS 130
D AT + +LK T+DK + G + K + KV V + + D
Sbjct: 242 VDDVVKVATEETQKLKQTTDKIKEDVGKQVQKTIKDTEKKVSQKVQKETKKEQPKTQD-- 299
Query: 131 NQKISSKVTKKQGSITEETL-------------KANKLDSKKLTRS------------NG 165
QK ++ ++QG I + T K K ++KK T+
Sbjct: 300 TQKSFTQTLREQGLIVDNTTTEKPKETQKTEPKKEPKKETKKETKKEQPETQDTQKSFTQ 359
Query: 166 TTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVF 225
T E I D K ET K K E S K T ++ +K G+VK F
Sbjct: 360 TLREQGLIVDNTTTEKPKETQKTEPKKEQS----------KAKTEPKSKDSKKSGEVKTF 409
Query: 226 LN 227
++
Sbjct: 410 ID 411
>ref|YP_127806.1| hypothetical protein lpl2476 [Legionella pneumophila str. Lens]
Length = 453
Score = 35.8 bits (81), Expect = 0.80
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 107 DKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK--KQGSITEETLKANKLDSKKLTRSN 164
D++ V + S+D + + F + SK + G I E N D +K + SN
Sbjct: 245 DETHVYSSSSSDKAYMAADCFTENRGYRFSKASDVYSLGKILTEKFDINITDGQKESLSN 304
Query: 165 GTTLEYSQI---------TDADNATKAV--------ETLKNSIKLEGSLVVGKTTVEIKE 207
L Y Q+ T D A + ++N +KL+ K +E+ +
Sbjct: 305 KKYLSYDQLMIKSFLEKMTATDEAKRPTIKECKEFFNQIENKMKLDLEQPENKARLELSK 364
Query: 208 GTVTL-------KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTI 248
++L + EI+ K+ FL+ + KT K+E++ T+ +
Sbjct: 365 KIISLEVYANQLRNEIQNQNKLDKFLSSAGLTADKTKKYEETIKTIEL 412
>ref|YP_044637.1| zinc metalloproteinase aureolysin precursor [Staphylococcus aureus
subsp. aureus MSSA476]
Length = 509
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|YP_417959.1| zinc metalloproteinase aureolysin [Staphylococcus aureus RF122]
Length = 509
Score = 35.8 bits (81), Expect = 0.80
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSNNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKNKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|YP_013502.1| lysM domain protein [Listeria monocytogenes str. 4b F2365]
Length = 462
Score = 35.8 bits (81), Expect = 0.80
Identities = 52/214 (24%), Positives = 86/214 (40%), Gaps = 27/214 (12%)
Query: 90 GTSDKNNGSGTLEGSKPDKSKVK-----LTVSADLNTVTLEAFDASNQKI----SSKVTK 140
G+ GS T++ +K + +T+ AD N L +NQ + +K+T
Sbjct: 216 GSGQNLLGSATIKYRDANKKVITTNIQPITLDADRN-FELSIGTLNNQSVVITYDTKITT 274
Query: 141 KQGSITEE-TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
KQ S T + TL + LD+ N T +Y A + +
Sbjct: 275 KQKSYTNKATLSGDNLDA---VSRNATVNDYGSGGQGTGTPPAPPVKEEPPFIPAEKQPI 331
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG------SNK------KTGKWEDSTS-TL 246
+ TVE G + + ++ E++GK+KV G +NK + W + TS TL
Sbjct: 332 EKTVETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTL 391
Query: 247 TISADSKKTKDLVFLTDGTITVQQYNTAGTSLEG 280
+ T + L+ TI Q T+ TS++G
Sbjct: 392 QAGQKLQLTIEKTLLSKITIPPVQKVTSTTSVDG 425
>ref|NP_929220.1| flagellar hook-associated protein [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 473
Score = 35.4 bits (80), Expect = 1.0
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 118 DLNTVTLEAFDASNQK----ISSKVTKKQGSITE-ETLKANKLDSKKLTRSNGTTLEYSQ 172
DL ++ L+ A+ QK ++ + T +G +T TLK + +KL ++ + ++ +
Sbjct: 14 DLGSI-LDKLQAAEQKRLVPLAQQQTSYKGKLTAFGTLKGSL---EKLETASESLKKFDK 69
Query: 173 ITDADNATKAVETLKNSI-KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
+ N T A E + + G ++E+K+ + EK +K +L ++ G
Sbjct: 70 L----NTTTASEKHDAFVASTDSKASPGNYSIEVKQLAQAQSLQTEKVSNIKEYLGESLG 125
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
K T T+TI+ +K + LTDG ++ + A EG+ +
Sbjct: 126 EGK--------TRTITITQPGEKKPMKIELTDGQTSIIEIRDAINKQEGNVN 169
>ref|YP_087940.1| hypothetical protein MS0748 [Mannheimia succiniciproducens MBEL55E]
Length = 5399
Score = 35.4 bits (80), Expect = 1.0
Identities = 54/247 (21%), Positives = 88/247 (35%), Gaps = 19/247 (7%)
Query: 36 DSSKKSHQNAKQDLPAVTEDSVSLFNGNK--IFVSKEKNSSGKYDLRATIDQVELKGTSD 93
D+ + N A +VS N +K I N + K D T+ V TS
Sbjct: 4025 DAGNHAITNVTNGTNATDAVNVSQLNASKTSIVEGNNVNVTAKTDTNGTVYTVNAN-TST 4083
Query: 94 KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKAN 153
+NGS + ++ D + DL+ + D ++ + S T G+ +TL +
Sbjct: 4084 VSNGSDKITVTQTDAGNHTSNYAVDLSDAAKASLDKADSALQSLTTSADGA-KAQTLDKD 4142
Query: 154 KLDSKKLTRSN-GTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT- 211
++ ++ SN T IT A + + G + + T ++ T+T
Sbjct: 4143 NSNANFISGSNIRLTPSADGITIATAENVTFTNVNTTNFKAGDVTINSTGIDAGNHTITN 4202
Query: 212 -LKREIEKDGKVKVFLNDTAGSNKKTGKWEDST--------STLTI----SADSKKTKDL 258
K D L G N D T ST+TI + DS T +
Sbjct: 4203 VAKGVNATDAVNLAQLESYVGDNSYNWNLSDGTNNNAVADNSTVTITGSANGDSANTSGI 4262
Query: 259 VFLTDGT 265
V +GT
Sbjct: 4263 VTELNGT 4269
>ref|NP_783071.1| membrane associated protein [Clostridium tetani E88]
Length = 416
Score = 35.4 bits (80), Expect = 1.0
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 35/190 (18%)
Query: 68 SKEKNSSGKYDL--RATIDQVELKGTSDKNNGSGTLEGSKP-DKSKVKLTVSADLNTVTL 124
+K K G Y L + I QV ++G S +E + +K + VSA +
Sbjct: 142 TKGKIGEGYYALPYSSNIKQVAIRGASQHMMSIAKVEAEVDLNNAKKDIDVSAPI----- 196
Query: 125 EAFDASNQKISS----------KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQIT 174
+AFDA+ ++ S K+ K+ + +K ++++ + I
Sbjct: 197 KAFDANGNEVKSALLDPGMARIKIPVKKINTVGINVKFEPDPNREIKEIKSIPDKVQIIG 256
Query: 175 DAD--NATKAVET-------LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVF 225
D D N+ +++T L N ++E L++ K T IK+ + ++K VKV+
Sbjct: 257 DEDAINSINSIDTETININNLNNGDEVEAKLILPKNTSLIKDQSTSIK--------VKVY 308
Query: 226 LNDTAGSNKK 235
N G+N+K
Sbjct: 309 FNGEEGNNEK 318
>ref|YP_349485.1| Outer membrane autotransporter barrel [Pseudomonas fluorescens PfO-1]
Length = 3506
Score = 35.4 bits (80), Expect = 1.0
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 13/98 (13%)
Query: 155 LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKR 214
+ S L + GTTL+ T TL N I L G+L VG + GTV
Sbjct: 1044 IGSGALNAAAGTTLD----------TNTAVTLGNQINLAGALNVGGSADLTLTGTVAGAG 1093
Query: 215 EIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS 252
+ KDG + LN G+N G + TLT+ S
Sbjct: 1094 SLVKDGAANLNLN---GTNTYVGGTTLNAGTLTVGNSS 1128
Score = 32.3 bits (72), Expect = 8.8
Identities = 48/190 (25%), Positives = 73/190 (38%), Gaps = 22/190 (11%)
Query: 90 GTSDKNNGSGT-LEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEE 148
GT N +GT L+ + + ++ADL +A S IS +G
Sbjct: 614 GTGALNAAAGTTLDATTAVTLANAVALAADLTIGGTQALGLSGV-ISGAGNLIKGGTANL 672
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQ-------ITDADNATKAVET---LKNSIKLEGSLVV 198
TL N S +NGT + S +T A T T L N++ L G+L +
Sbjct: 673 TLSGNNTFSGGTALNNGTLIIGSNTALGTGALTTAAGTTLDASTSVALSNAVALGGNLNI 732
Query: 199 GKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDL 258
+G V+ + K+G + LN G+N G + T+T A++
Sbjct: 733 AGNANLTLDGVVSGSGGLTKNGAANLILN---GTNTFLGAIALNAGTITAGANAA----- 784
Query: 259 VFLTDGTITV 268
L G ITV
Sbjct: 785 --LGSGNITV 792
>ref|YP_718593.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 4238
Score = 35.4 bits (80), Expect = 1.0
Identities = 58/248 (23%), Positives = 97/248 (39%), Gaps = 48/248 (19%)
Query: 31 DLNLEDSSKKSHQNAKQDLPAV-----------TEDSVSLFNGNKIFVSKEKN------S 73
+L+ E ++K++ ++A L V T + ++ NG+KI S ++ +
Sbjct: 3479 ELDKEGNTKENGKSASYTLDKVELKDGNKSNTSTAEGNAIVNGDKIHTSTAESDLLLDKA 3538
Query: 74 SGKYDLRATIDQV--ELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
+G + R V + G + G G K + K + T++ D S
Sbjct: 3539 TGDSNTRTATANVIADKAGNQSVLDKDGLTVGDKDATNGDKTHAVYGKDGFTVKGKDGST 3598
Query: 132 QKISSKVTKKQGSITEETLKANKLDSK---------KLTR-SNGTTLEYSQITDADNATK 181
+ IS KVT+K G T D K LT+ S+GT++ D +
Sbjct: 3599 EAISLKVTEKDGKETATLAFGKGTDGKGTGVITGLADLTKDSDGTSVANKNYVD-EKVES 3657
Query: 182 AVETLKNS-----------IKLEGSLVVGKTTVEIKEGTVTLKREIEK---DGKVKVFLN 227
+ LKN+ +K E L K +E KE + K E++K D + KV
Sbjct: 3658 INDKLKNNLGLKEIDNPDYVKAEEDLAKAKEALE-KENNLAKKAELQKAVTDAEAKV--- 3713
Query: 228 DTAGSNKK 235
+ NKK
Sbjct: 3714 NELSKNKK 3721
>ref|YP_719821.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 3078
Score = 35.4 bits (80), Expect = 1.0
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 164 NGTTLEYSQITDADNATKAVET---LKNSIKLEGSLVV-GKTTVEIKEGTVTLKREIEKD 219
+GT L +Q + + E L N+ E +++ GK T E+K G V +K +K
Sbjct: 2449 DGTVLVNNQTAEGVSTIAKKEDGSILVNNQTAEANILSNGKNTTEVKAGEVAIK---DKA 2505
Query: 220 GKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT------KDLVFLTDGT 265
GK V L G + + GK +T T AD K T KDL +DGT
Sbjct: 2506 GKDVVSLKVAKGEDGQDGK--GATLAFTKGADDKGTGTITGLKDLDATSDGT 2555
>ref|NP_375756.1| zinc metalloproteinase aureolysin [Staphylococcus aureus subsp.
aureus N315]
Length = 509
Score = 35.4 bits (80), Expect = 1.0
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKHKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|NP_373161.1| zinc metalloproteinase aureolysin [Staphylococcus aureus subsp.
aureus Mu50]
Length = 509
Score = 35.4 bits (80), Expect = 1.0
Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 24/217 (11%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIF-VSKEKNSSGKYDLR 80
+S +D+ E + K A ++LP +E+ +++ + V +K Y L+
Sbjct: 29 DSKNKPANSDIKFEVTQKSDAVKALKELPK-SENVKNIYQDYAVTDVKTDKKGFTHYTLQ 87
Query: 81 ATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTK 140
++D V K + DKS + ++ D DA K ++KVT
Sbjct: 88 PSVDGVHAPDKEVKVHA---------DKSGKVVLINGDT--------DAKKVKPTNKVTL 130
Query: 141 KQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ KA K+D K ++ +++ ++ K V ++ I + + K
Sbjct: 131 SKDDAADKAFKAVKIDKHKAKNLKDKVIKENKVEIDGDSNKYVYNVE-LITVTPEISHWK 189
Query: 201 TTVEIKEGTV----TLKREIEKDGKVKVFLNDTAGSN 233
++ + G + L +E + GK K L DT N
Sbjct: 190 VKIDAQTGEILEKMNLVKEAAETGKGKGVLGDTKDIN 226
>ref|YP_185494.1| sdrD protein [Staphylococcus aureus subsp. aureus COL]
Length = 1381
Score = 35.4 bits (80), Expect = 1.0
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ + ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ E +PD + K V+ + DA + + V
Sbjct: 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTNEENKKVDAKTESTTLNVKSDAIKS 197
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNA---TKAVETLKNSIKLEGSLVVGKTT 202
+ETL N +S ++ L S N AV+ K L+ TT
Sbjct: 198 NDETLVDNNSNSNNENNAD-IILPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTT 256
Query: 203 VEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS-A 250
+ + + ++LK +I D KVK + T K+ D+ ++
Sbjct: 257 LTVVDADKNNKIVPAQDYLSLKSQITVDDKVK-------SGDYFTIKYSDTVQVYGLNPE 309
Query: 251 DSKKTKDLVFLTDG-TITVQQYNTA 274
D K D+ +G TI +++TA
Sbjct: 310 DIKNIGDIKDPNNGETIATAKHDTA 334
>ref|YP_499118.1| sdrD protein, putative [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 1349
Score = 35.4 bits (80), Expect = 1.0
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ + ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ E +PD + K V+ + DA + + V
Sbjct: 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTNEENKKVDAKTESTTLNVKSDAIKS 197
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNA---TKAVETLKNSIKLEGSLVVGKTT 202
+ETL N +S ++ L S N AV+ K L+ TT
Sbjct: 198 NDETLVDNNSNSNNENNAD-IILPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTT 256
Query: 203 VEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS-A 250
+ + + ++LK +I D KVK + T K+ D+ ++
Sbjct: 257 LTVVDADKNNKIVPAQDYLSLKSQITVDDKVK-------SGDYFTIKYSDTVQVYGLNPE 309
Query: 251 DSKKTKDLVFLTDG-TITVQQYNTA 274
D K D+ +G TI +++TA
Sbjct: 310 DIKNIGDIKDPNNGETIATAKHDTA 334
>ref|YP_909957.1| probable solute-binding protein of ABC transporter for peptides
[Bifidobacterium adolescentis ATCC 15703]
Length = 541
Score = 35.4 bits (80), Expect = 1.0
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
TE +V L G K + +S D++ + D++ K +D+N S L + ++K
Sbjct: 94 TEFTVKLKKGLKFANGHDLTAS---DVKFSFDRI--KKINDENGPSSLLANIESVEAKDD 148
Query: 113 LTV---SADLNTVTL--------------EAFDASNQKISSKVTKKQGSITEETLKANKL 155
TV SA + VTL E+F A ++ V K L + K+
Sbjct: 149 TTVVFHSAVKDDVTLKQVLSSPAGPIVDEESFSADKLTDANTVVKDNAFAGPYKLTSYKV 208
Query: 156 DSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKRE 215
+ N + Y +T A N V+ +S L+ ++ G+ V + T T +
Sbjct: 209 NEALAYAKNDS---YKGLTPAKNDVVQVKYFADSSNLKMAVQQGQVDVAYRSMTPTDVED 265
Query: 216 IEKDGKVKV 224
+ KD KVKV
Sbjct: 266 LSKDNKVKV 274
>ref|YP_493250.1| sdrD protein [Staphylococcus aureus subsp. aureus USA300]
Length = 1381
Score = 35.4 bits (80), Expect = 1.0
Identities = 57/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
+ND E S + ++ + ++SV GNK+ VS K+ +Q
Sbjct: 88 KNDNQKEMVSSQGNETTSNGNKLIEKESVQSTTGNKVEVSTAKSD----------EQASP 137
Query: 89 KGTSDKNNGSGTL---EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSI 145
K T++ N T+ E +PD + K V+ + DA + + V
Sbjct: 138 KSTNEDLNTKQTISNQEALQPDLQENKSVVNVQPTNEENKKVDAKTESTTLNVKSDAIKS 197
Query: 146 TEETLKANKLDSKKLTRSNGTTLEYSQITDADNA---TKAVETLKNSIKLEGSLVVGKTT 202
+ETL N +S ++ L S N AV+ K L+ TT
Sbjct: 198 NDETLVDNNSNSNNENNAD-IILPKSTAPKRLNTRMRIAAVQPSSTEAKNVNDLITSNTT 256
Query: 203 VEIKEGT-----------VTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTIS-A 250
+ + + ++LK +I D KVK + T K+ D+ ++
Sbjct: 257 LTVVDADKNNKIVPAQDYLSLKSQITVDDKVK-------SGDYFTIKYSDTVQVYGLNPE 309
Query: 251 DSKKTKDLVFLTDG-TITVQQYNTA 274
D K D+ +G TI +++TA
Sbjct: 310 DIKNIGDIKDPNNGETIATAKHDTA 334
>ref|YP_535846.1| hypothetical protein LSL_0953 [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 194
Score = 35.4 bits (80), Expect = 1.0
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 123 TLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA 182
+LEA ++S +K +++ KK+ SI + K+ K +S+K N Q+T N+
Sbjct: 38 SLEAKESSIKKAKAELKKKESSIKKAQSKSKKAESEKEASENAAATNSQQVTQQQNSDSY 97
Query: 183 VETLKNSIKLEGSL 196
IK + +
Sbjct: 98 QTQTSTPIKSQSQI 111
>ref|YP_943727.1| filamentous haemagglutinin family outer membrane protein
[Psychromonas ingrahamii 37]
Length = 4500
Score = 35.4 bits (80), Expect = 1.0
Identities = 61/241 (25%), Positives = 89/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1787 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1841
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1842 SVNGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1891
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1892 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVDGILTIDKAALTVTADNQSRTYGA 1950
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S++
Sbjct: 1951 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVD 2010
Query: 280 G 280
G
Sbjct: 2011 G 2011
Score = 35.4 bits (80), Expect = 1.0
Identities = 61/241 (25%), Positives = 89/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1538 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1592
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1593 SVNGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1642
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1643 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVNGILTIDKAALTVTADNQSRTYGA 1701
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S++
Sbjct: 1702 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVD 1761
Query: 280 G 280
G
Sbjct: 1762 G 1762
Score = 34.7 bits (78), Expect = 1.8
Identities = 61/241 (25%), Positives = 88/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1621 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1675
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1676 SVNGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1725
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1726 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVDGILTIDKAALTVTADNQSRTYGA 1784
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S+
Sbjct: 1785 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVN 1844
Query: 280 G 280
G
Sbjct: 1845 G 1845
Score = 34.7 bits (78), Expect = 1.8
Identities = 61/241 (25%), Positives = 88/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1455 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1509
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1510 SVNGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1559
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1560 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVNGILTIDKAALTVTADNQSRTYGA 1618
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S+
Sbjct: 1619 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVN 1678
Query: 280 G 280
G
Sbjct: 1679 G 1679
Score = 34.7 bits (78), Expect = 1.8
Identities = 61/241 (25%), Positives = 88/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1372 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1426
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1427 SVNGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1476
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1477 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVNGILTIDKAALTVTADNQSRTYGA 1535
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S+
Sbjct: 1536 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVN 1595
Query: 280 G 280
G
Sbjct: 1596 G 1596
Score = 34.3 bits (77), Expect = 2.3
Identities = 61/241 (25%), Positives = 88/241 (36%), Gaps = 26/241 (10%)
Query: 50 PAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS 109
PA+T NG V +G T D GT+ G G+L S D S
Sbjct: 1289 PALTSSLTGFVNGETDSVL-----TGAGSATTTADATTGAGTATITAGVGSLASSNYDFS 1343
Query: 110 KVK--LTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
V LT+ TVT + + A N ++S +T G + ET LT +
Sbjct: 1344 SVDGILTIDKAALTVTADNQSRTYGAVNPALTSSLT---GFVNGET-------DSVLTGA 1393
Query: 164 NGTTLEYSQITDADNA--TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
T T A A T V +L +S + S V G T++ TVT + G
Sbjct: 1394 GSATTTADATTGAGTATITAGVGSLASS-NYDFSSVNGILTIDKAALTVTADNQSRTYGA 1452
Query: 222 VKVFLND--TAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
V L T N +T + T +AD+ +T G ++ N +S+
Sbjct: 1453 VNPALTSSLTGFVNGETDSVLTGAGSATTTADATTGAGTATITAGVGSLASSNYDFSSVN 1512
Query: 280 G 280
G
Sbjct: 1513 G 1513
>ref|YP_379546.1| VCBS [Chlorobium chlorochromatii CaD3]
Length = 16311
Score = 35.4 bits (80), Expect = 1.0
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 12/172 (6%)
Query: 128 DASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITD---ADNATKAVE 184
D+ + I+ T IT + + L+ S + +TD A ATK+V
Sbjct: 11495 DSEDVTITITGTNDAPLITAPNVAGTITEGSTLSDSGSISFGDLDLTDRPTAAEATKSVS 11554
Query: 185 TLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTS 244
L+ + L + T T+T + + DG + N + S K E T+
Sbjct: 11555 ALQANGSTALVLTSAQQTAIENAFTITAESGNDNDGTIAWNYNISETSLDFLAKDETVTA 11614
Query: 245 TLTISADSKK----TKDLVFLTDGT-----ITVQQYNTAGTSLEGSASEIKN 287
T TI+ K ++D+ GT IT N AGT EGS S + +
Sbjct: 11615 TFTITVTDGKGGNDSEDVTVTIIGTNDAPVITATAENIAGTITEGSVSTLSD 11666
>ref|YP_447110.1| member of asn/thr-rich large protein family [Methanosphaera
stadtmanae DSM 3091]
Length = 1909
Score = 35.4 bits (80), Expect = 1.0
Identities = 53/237 (22%), Positives = 99/237 (41%), Gaps = 47/237 (19%)
Query: 33 NLEDSSKKSHQNAK--QDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKG 90
+LE +H +AK + + +++++ V++ + K + + I+Q+ + G
Sbjct: 1706 SLEVLKTNTHIDAKITDVIGNIANVKLNIYDETNNLVNRNTKVTVKINGKTVINQLNITG 1765
Query: 91 TSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETL 150
T + N TL +K + +++ + +++S Q I+ + K
Sbjct: 1766 TGNINL---TLPQTKDETYSIEIIAGEN------NGYESSTQTITYTIPKA--------- 1807
Query: 151 KANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTV 210
SK T T +QIT+ AT AV+ + + LV G T V +K
Sbjct: 1808 ------SKITTHIQSTA---TQITNK-TATVAVQIYDD----KNQLVTGNTKVVVKLNGK 1853
Query: 211 TLKREIEKDGKVKVFLNDTAGSNKKT----------GKWEDSTSTLTISADS-KKTK 256
TL + KDG+V + N T + K T K+++ST + + +S KTK
Sbjct: 1854 TLNNTVAKDGQVNI--NITIPTKKATYTLTVIAGENNKYKESTIQVPLKVESIPKTK 1908
>ref|YP_807854.1| hypothetical protein LSEI_2694 [Lactobacillus casei ATCC 334]
Length = 206
Score = 35.4 bits (80), Expect = 1.0
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 42/171 (24%)
Query: 90 GTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS------------------N 131
G +D + + TLE K D + T+SA+ T E FD + +
Sbjct: 31 GQNDPHAATNTLEVKKTDSA----TISAE---GTFEPFDPTKLPDPAKPTPKKDHKAWVD 83
Query: 132 QKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIK 191
KI SKV Q ++E + N + + L+ + G + + TD DNA K L ++
Sbjct: 84 VKIPSKVLFSQTDVSEGIISPN-YEIQNLS-AKGVKVSINDFTDGDNANKLEGRLDLNLN 141
Query: 192 LEGSLVVGKTTVEIKE-------GTVTLKREIEKDGKVKVFLNDTAGSNKK 235
+G V ++T + K GT+T ++GK++ L AGS KK
Sbjct: 142 SDGKKVALRSTDKQKVPSFPTEIGTIT-----SQNGKIQFTL---AGSVKK 184
>ref|YP_394717.1| Hypothetical cell surface protein precursor [Lactobacillus sakei
subsp. sakei 23K]
Length = 424
Score = 35.4 bits (80), Expect = 1.0
Identities = 60/283 (21%), Positives = 106/283 (37%), Gaps = 24/283 (8%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVT---EDSVSLFNGNKIFVSKEKNSS 74
Q I SQ N + D +K + ++ Q + A+ E + + K + K+ S
Sbjct: 58 QNKVSEINSQVSNKVIAIDDAKANIKSIDQQIVALDQSIEKAKAEVQARKSVMKKQAVSL 117
Query: 75 GKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKI 134
K + V + + +N S + + +V LN + EA A +
Sbjct: 118 QKEAGNSVSGNVYVDFIVNSDNFSDMMS---------RASVVGKLNQASKEAMTAVSDSE 168
Query: 135 SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEG 194
S+ T K T+ET KA+ + +K ++ L + DA+ K ET K +
Sbjct: 169 STLATLKT---TQETKKADLVKTKSQLEADQAKLVTLK-DDAEKEQKRFETEVEGHKTQL 224
Query: 195 SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
+ + + + K++ E D K KT +STS+ + S K
Sbjct: 225 ANLQSQLDSQTAAAVEVAKQQAEADKAAKT-------EAPKTATKSESTSSDIKNESSDK 277
Query: 255 TKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSEL-KNALK 296
TK L + T N ++ + + + N L NAL+
Sbjct: 278 TKTESVLNNNTGATTPNNNNNSASKATTKPVANTGSLVSNALQ 320
>ref|NP_244996.1| PfhB2 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 3919
Score = 35.4 bits (80), Expect = 1.0
Identities = 72/339 (21%), Positives = 127/339 (37%), Gaps = 80/339 (23%)
Query: 24 IGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKI-FVSKEKNSSGKYD---- 78
I E DL+ + K S +N D+ A+T S +G I + +K + K+D
Sbjct: 306 IAGSSEYDLSKHELKKTSGENVSNDVIAITGSSTGAMHGKNIKLIVTDKGAGVKHDGIIL 365
Query: 79 ---------------LRATIDQVELKGTSDKN----------NGSGTLEGSKP------- 106
L TI Q +K D+N N + GS+
Sbjct: 366 SENDIQIEMNEGDLELGNTIQQTVVK--KDRNIRAKKKIEVKNANRVFVGSQTKSDEISL 423
Query: 107 DKSKVKLTVSADLNTVT---LEAFDASNQKISSKVTKKQGSITEETL--------KANKL 155
+ +VK+ +A++ + T + A A + + ++K+ K+ + ETL + KL
Sbjct: 424 EAKQVKIRKNAEIRSTTQAKIVAKGALSIEQNAKLVAKKIDVATETLTNAGRIYGREVKL 483
Query: 156 DSKKLTR-------------SNGTTLEYSQITDADNATKAVETLKNSIKLEGS------- 195
D+ L + G LE Q D + +K+S++ GS
Sbjct: 484 DTNNLINDKEIYAERKLSILTKGKDLEIIQ----DRYLSPLMRVKSSVRFLGSPFFSISP 539
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS--- 252
++ + + K G V K IE G ++ + + + + LTI+A +
Sbjct: 540 SMLASLSAQFKPGFVN-KGLIESAGSAELTFKEKTSFLTEGNNFIRAKDALTINAQNIEI 598
Query: 253 KKTKDLVFLTDGTITVQQ--YNTAGTSLEGSASEIKNLS 289
K +D+ + T+ V++ N AGT G I S
Sbjct: 599 DKNQDIQLGANITLNVEENFVNRAGTLATGKTLTINTES 637
>ref|NP_326524.1| MEMBRANE NUCLEASE, LIPOPROTEIN [Mycoplasma pulmonis UAB CTIP]
Length = 1125
Score = 35.4 bits (80), Expect = 1.0
Identities = 46/231 (19%), Positives = 91/231 (39%), Gaps = 18/231 (7%)
Query: 27 QKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQV 86
Q +N N +++S S QN + ++ + + KI + + NS+ T ++
Sbjct: 470 QNKNSENKDENSNDSKQNLDKPKTNNEQNQNTQDDSKKISDASQNNSN-------TTNEK 522
Query: 87 ELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSIT 146
+ K S + + ++ + D+ L+ S + + E+ N + + +
Sbjct: 523 DQKLDSQDESKNNAIKSQQNDQKDSNLSSSKNDTQPSKESSPQINPNLENNQEISHSNNG 582
Query: 147 EETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIK 206
E DSK+ SN + D + K T KN S V K +
Sbjct: 583 END------DSKEQNTSNSRQTK----NDLRSEQKQNLTTKNPSS-NSSNVETKNETQNN 631
Query: 207 EGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKD 257
E + T K EI+ K + N + +KT + E T+T + +++S ++
Sbjct: 632 ENSSTKKDEIDTSAKTQDSTNSNLKNEEKTNQVETKTNTESNNSNSTNKQE 682
Score = 32.3 bits (72), Expect = 8.8
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 22 ESIGSQKENDL-----NLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGK 76
E+I + ++ND N +DS K + +N Q + ++ + N NK +NSS K
Sbjct: 82 ENIKANEKNDSNQTQDNQDDSKKINDKNQSQSNQQLNNENDNSVNNNK------ENSSSK 135
Query: 77 YDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVT 123
D T+ +V L G + N SG + SKV L DL +T
Sbjct: 136 NDENLTLTKVRL-GHWNVLNQSGNIPTKNLAISKVILHNKLDLVGLT 181
>ref|NP_975432.1| hypothetical protein MSC_0446 [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
Length = 255
Score = 35.4 bits (80), Expect = 1.0
Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 30 NDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELK 89
+D N S+ K +N KQD + N+ KN S K + T+D +
Sbjct: 15 SDNNNNSSTNKQDKN-KQD-----------HSNNEKMGENTKNDSDKINTEKTLDNDRMN 62
Query: 90 GTSDKNNGSGTLEGSKPDKSKVKLTV-SADLNTVTLEAFDASNQKISSKVTKKQGSITEE 148
SD+ E S P + K V S + LE+ +++N ++ E+
Sbjct: 63 NQSDQPR-----EESTPRNNDSKENVWSRGIKKRILESLNSTNLDYLKTLSNSLIQEKEK 117
Query: 149 TLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIK 191
TL +N +D K L T S++ + + + +L+ SIK
Sbjct: 118 TLISNNIDKKTLEYKTKLTKFSSELKFDEIKKELISSLEESIK 160
>ref|YP_015983.1| type I restriction enzyme m protein [Mycoplasma mobile 163K]
Length = 524
Score = 35.4 bits (80), Expect = 1.0
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 28 KENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVE 87
K+ D E+ S + K+++ + ++ + +FV+ KN+S DL +D+V
Sbjct: 62 KKQDFRYENISDDKILSKKEEIKELVKEKGFFIRPSHLFVNIRKNASKNKDLNVALDKV- 120
Query: 88 LKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITE 147
K NGS + + K + L S +TV + N+K+ +K+ G +
Sbjct: 121 FKEIEASANGSSSEKDFKGLFDDINLNSSKLGSTV-----NERNEKL-TKLINNIGEMKL 174
Query: 148 ETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA 182
K N +D + G EY A NA K+
Sbjct: 175 GNFKDNSID------AFGDAYEYLMSMYASNAGKS 203
>ref|NP_800952.1| putative hemagglutinin/hemolysin-related protein [Vibrio
parahaemolyticus RIMD 2210633]
Length = 3770
Score = 35.0 bits (79), Expect = 1.4
Identities = 71/300 (23%), Positives = 114/300 (38%), Gaps = 55/300 (18%)
Query: 21 AESIGSQKENDLNLEDSSKKS--HQNAKQDLPAVTEDSV---SLFNGNKIFVSKEKNSSG 75
AE G+ E LE ++ + A+ + ED+V ++NG F N
Sbjct: 2787 AEFAGATAEATATLETLPEEVWIEKTAESPMYIPGEDAVFHVRVYNGTDGF----DNDIA 2842
Query: 76 KYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKIS 135
D+ + I + G S++ S T+E T S+D T T+ NQ I
Sbjct: 2843 LEDILSGIKATNIYGVSERAFESWTIE-----------TTSSDSRT-TITPMPVDNQDIR 2890
Query: 136 SKVTKKQGSITEETL--KANKLDSKKLTRS-----NGTTLEYSQITDADNATKAVE---- 184
S + + E T+ K N L + +T + NGT S + ++E
Sbjct: 2891 SMIDIAPHDLVEFTITAKTNPLAASDITNTATADLNGTQQLSSATVQPQSQGISIEKTAD 2950
Query: 185 ----------TLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDG-KVKVFLNDTAGSN 233
T + +K EG+ V T V +K+ L+ + DG VK F + N
Sbjct: 2951 TQYYVPGAEATFRVKVKNEGT--VPATDVVVKDAISNLE-VVRLDGTSVKAFDSWRIEVN 3007
Query: 234 KKTGKWE---------DSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASE 284
K + E D STLTI+A+ + + L + T + NTA + G +
Sbjct: 3008 KANAETEITNMPGVNSDIDSTLTIAANDEVEFVITGLVNQYATGEIENTASATFRGETQD 3067
>ref|NP_786373.1| extracellular protein [Lactobacillus plantarum WCFS1]
Length = 495
Score = 35.0 bits (79), Expect = 1.4
Identities = 50/239 (20%), Positives = 84/239 (35%), Gaps = 13/239 (5%)
Query: 52 VTEDSVSLFNGNKIFVSKEKN----SSGKYDLRATID-QVELKGTSDKNNGSGTLEGSKP 106
VT SL +GN I +S K S ++++ + + + T + G+ L
Sbjct: 126 VTATPTSLGSGNSIMISSSKQTQTLSVNFQNIKSELPIYIGFRITVNGEEGTYQLGRFNA 185
Query: 107 DKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGT 166
K+T + T++ ISS V ++ + L + T SN T
Sbjct: 186 QTLSPKITGTLYSTDTTIKGTGTPGNTISSNVNGVTTTVGSDGTYTLNLGTALGTLSNVT 245
Query: 167 TLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFL 226
E +IT A TLK ++ KT+V++ G + + D V +L
Sbjct: 246 VTEVDEITGDKGTATAAVTLKKL-----NITSSKTSVDLYPGELD---SLTSDSAVVAWL 297
Query: 227 NDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEI 285
AG T T + S +K + T+ Y + L+ A I
Sbjct: 298 VKQAGIVATNPDSATDTITYAANETSLASKLSSLAVGSSTTINIYGKGSSGLKSDAKAI 356
>ref|NP_719842.1| RTX toxin, putative [Shewanella oneidensis MR-1]
Length = 2768
Score = 35.0 bits (79), Expect = 1.4
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 22/212 (10%)
Query: 95 NNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANK 154
N+ + GSK ++ +LT++AD + A D + Q T G+ + T+
Sbjct: 2005 NSATQHTAGSKITLAEGELTLNADGSYTFTPAADWNGQVPVITYTTNTGATSTLTIVVTP 2064
Query: 155 LDSKKLTRSNGTTLEYSQI---------TDADNATKAVETLKNSIKLEGSLVVGKTTVEI 205
+D +T+ T+ + TD DN N + G T ++
Sbjct: 2065 VDDPTVTKPESKTIAEDALAKGNVLENDTDVDNTLSVTSFQVNGVTYN----AGNTWYQL 2120
Query: 206 KEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLT-DG 264
EGT+ LK E K + +GS ++ +T T++ + D LT +G
Sbjct: 2121 PEGTLQLKTNGEYSFDPK---DHWSGSLPVITYTTNTGATSTLNITVQAVADAPNLTING 2177
Query: 265 TITVQQYNTAGTSLEGS-----ASEIKNLSEL 291
+V N GS A++IK L+ +
Sbjct: 2178 YTSVAAINFEDAKFSGSWDGVKANDIKGLNTI 2209
>ref|YP_723033.1| Hemolysin-type calcium-binding region [Trichodesmium erythraeum
IMS101]
Length = 9867
Score = 35.0 bits (79), Expect = 1.4
Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 36/243 (14%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G SI +D N + + + + P T+D+ S G + +N YD
Sbjct: 7310 GPSSISYTVADDNNQKSNPAQITVEVENQPPIATDDNASTTKGEPVTFDILENDIDDYD- 7368
Query: 80 RATIDQVELKGTSDKNNGSGTLEG----SKPDKSKVKLTVSADL---NTVTLEAFDASNQ 132
+ ++L ++++ + +EG + + KV T D +T++ D SNQ
Sbjct: 7369 KIDPTTIDLDPSTEEPEKTKVVEGEGTYTVDETGKVTFTPETDFAGPSTISYTVADDSNQ 7428
Query: 133 K-----ISSKVTKKQGSITEETLKANK----------LDSKKLTRSNGTTLEYSQITDAD 177
K I+ +V + T E K D + + TT++ T+
Sbjct: 7429 KSNEAEITVEVVNQPPIATPENASTTKGEPVTFDILENDIDDYDKIDPTTIDLEPSTEEQ 7488
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
TK VE EG+ V +T G VT E + G + +N+K+
Sbjct: 7489 EKTKVVEG-------EGTYTVDET------GKVTFTPETDFAGPSTISYTVADDNNQKSN 7535
Query: 238 KWE 240
+ E
Sbjct: 7536 EAE 7538
Score = 33.1 bits (74), Expect = 5.2
Identities = 47/233 (20%), Positives = 90/233 (38%), Gaps = 24/233 (10%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G SI +D N + + + P T+D+ S G + +N YD
Sbjct: 6477 GTSSISYTVADDNNQKSNEAQITVEVVNQPPIATDDNASTTKGEPVTFDILENDIDDYD- 6535
Query: 80 RATIDQVELKGTSDKNNGSGTLEG----SKPDKSKVKLTVSADL---NTVTLEAFDASNQ 132
+ ++L+ ++++ + +EG + + KV T D ++++ D +NQ
Sbjct: 6536 KIDPTTIDLEPSTEEPENTKVVEGEGTYTVDETGKVTFTPETDFAGPSSISYTVADDNNQ 6595
Query: 133 K-----ISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI----TDADNATKAV 183
K I+ +V + T++ K + +Y +I D D +T+
Sbjct: 6596 KSNPAQITVEVENQPPIATDDNASTTKGEPVTFDILENDIDDYDKIDPTTIDLDPSTEEP 6655
Query: 184 ETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKT 236
E K ++ EGS V +T G VT E + G + +N+K+
Sbjct: 6656 ENTK-VVEGEGSYTVDET------GRVTFTPETDFAGPSSISYTVADDNNQKS 6701
>ref|YP_796402.1| hypothetical protein LVIS_A10 [Lactobacillus brevis ATCC 367]
Length = 195
Score = 35.0 bits (79), Expect = 1.4
Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Query: 102 EGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISS--KVTKKQGSITEETLKANKLDSKK 159
E K DK + ++N V L+ D +Q+IS K +Q + TL N+
Sbjct: 72 ENDKQDKKQT------NINDVLLKQLDVKDQQISKLQKSLDQQQQLQLATLAENRQLKGH 125
Query: 160 LTRSNGTTLEYSQITDADNATKAVETLKNSIK 191
+ + NG LE S T ATK + L NS+K
Sbjct: 126 IQKLNGL-LESSNSTQKRQATKKNDNLPNSVK 156
>ref|YP_907503.1| transcription termination factor Rho [Mycobacterium ulcerans Agy99]
Length = 621
Score = 35.0 bits (79), Expect = 1.4
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 27/140 (19%)
Query: 78 DLRATIDQVELKGTS---------------DKNNGSGTLEGSKPDKSKVKLTVSADLNTV 122
+LRA +QV +KGTS D+ NG+ PD + K + S + V
Sbjct: 45 ELRALANQVGVKGTSGMRKNELIAAIQEFRDRTNGTPAAAEPTPDSGEQKSSASTEAPAV 104
Query: 123 TLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQIT-------- 174
DA Q+ ++ G + + DS+ +R + S
Sbjct: 105 NEATKDAPQQEQNA----SSGDTVRRERRRSSRDSETSSRDGADSAGESPDKRGKRAAGG 160
Query: 175 DADNATKAVETLKNSIKLEG 194
DADN KA E + K++G
Sbjct: 161 DADNNQKAPEKAQEDAKIDG 180
>ref|NP_220569.1| dihydrolipoamide acetyltransferase [Rickettsia prowazekii str.
Madrid E]
Length = 401
Score = 35.0 bits (79), Expect = 1.4
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Query: 70 EKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDA 129
+K +S L ++ ++ + D NN GT G + K V T++ T+ A +
Sbjct: 107 DKPASSSNILAPSVQKLVTENKLDPNNIKGTGRGGRITKCDVLETINTTPVTIETPALNK 166
Query: 130 SNQKISSKVTKKQGSIT-EETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
+N++ + +V + T + LK ++ + LT N ++ S++ N K K+
Sbjct: 167 TNEERTQRVRMSRLRKTIAQRLKDSQNTAAILTTFN--EIDMSKVIALRNQYKEEFEKKH 224
Query: 189 SIKLEGSLVVGKTTVEIKEGTVTLKREIEKD 219
++KL K T+E + ++ EI+ D
Sbjct: 225 TVKLGFMSFFVKATIEALKLIPSINAEIDGD 255
>ref|NP_471841.1| hypothetical protein lin2511 [Listeria innocua Clip11262]
Length = 358
Score = 35.0 bits (79), Expect = 1.4
Identities = 51/223 (22%), Positives = 86/223 (38%), Gaps = 62/223 (27%)
Query: 113 LTVSADLNTVTLEAFDA----SNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTL 168
L + DL + L F+ SNQ I S+ +Q + KK+ ++G +
Sbjct: 146 LAQNKDLESKYLNVFETFQNFSNQTIDSETVDRQAE-----------ELKKIEEASGIAI 194
Query: 169 EYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND 228
YS + + D+ + K G +V+ + EIK+ + ++ DG + L++
Sbjct: 195 -YSYLNNLDDK-------HFTSKDNGDIVLNLSKNEIKDLVNDVFTALDNDGNIITLLSE 246
Query: 229 TAGSNKKTG--KWEDSTST-------------------LTISADSK-------------- 253
GS++K KW + LT++ DSK
Sbjct: 247 IDGSSQKEAQKKWNSGEKSVRSSLKNLTSNKNQTLDFKLTLTPDSKKGFSKAVITTNFED 306
Query: 254 -KTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNAL 295
KTKDL+ LT T+ + Y EG +I + EL A+
Sbjct: 307 SKTKDLINLTT-TVDMLDYEKVPPMPEG--KDIVSKKELDKAI 346
>ref|NP_469464.1| putative tape-measure [Bacteriophage A118] [Listeria innocua
Clip11262]
Length = 1788
Score = 35.0 bits (79), Expect = 1.4
Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 18/201 (8%)
Query: 69 KEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFD 128
K+ + Y L T++ + G + T K K +KL + T T
Sbjct: 829 KDAFNKDNYALTGTVEAFKQMGGEAEKTAKKTETSGKKIKETLKLVETTAKQTET--TVS 886
Query: 129 ASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
SNQ I + ++ G + + K ++ L + +Y + T +V ++
Sbjct: 887 KSNQAIDTMLS---GGVDQYGKKLSEKTESFLNAAKDLYEQYQEATIKSQDKYSV-AMEK 942
Query: 189 SIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTI 248
+ LEG K I + TL EI+K+ + L K KW D T +
Sbjct: 943 AQSLEGD----KRKKAIADANATLVAEIDKNNGTLLTLQADYAKLLKGNKWVDGTE---L 995
Query: 249 SADSKKTKDLVFLTDGTITVQ 269
+A KK FL T +Q
Sbjct: 996 TAQQKK-----FLQQQTADIQ 1011
>ref|YP_678943.1| DNA topoisomerase type I (omega protein) [Cytophaga hutchinsonii
ATCC 33406]
Length = 841
Score = 35.0 bits (79), Expect = 1.4
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 200 KTTVEIKEGTVTLKREI----EKDGKVKVFLNDTAGSN-------KKTGKWEDSTSTLTI 248
K T E K+GT T+K E+ E + + + FL+ G++ KK K S T
Sbjct: 192 KVTAEFKDGTKTIKAELPNRFETEAEAQAFLDKLVGADFFVRDLEKKPAKKSPSAPFTTS 251
Query: 249 SADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
+ + ++ L F T+TV Q + ++ NLS+
Sbjct: 252 TLQQEASRKLSFSVAQTMTVAQRLYEAGKISYMRTDSVNLSD 293
>ref|YP_016034.1| variable surface protein mvspK [Mycoplasma mobile 163K]
Length = 689
Score = 35.0 bits (79), Expect = 1.4
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 27/155 (17%)
Query: 129 ASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKN 188
A+N+ + K+TK ITE + K +K T IT+A+ T+ V
Sbjct: 30 ATNETNAQKITKALDLITETSFKIENKSNKMAT----------SITEANLQTEVVLN--- 76
Query: 189 SIKLEGSLVVGKTTVEIKEGTVTLKREIEK-----DGKVKVFLNDTAGSNKKTGKWEDST 243
+ G TT +K T TL E K G + + + T G++K T + + S
Sbjct: 77 --------ITGPTTSGVK-FTYTLATEESKKPNDTTGTINLIVTGTIGTDKNTKEIKISG 127
Query: 244 STLTISADSKKTKDLVFLTDGTITVQQYNTAGTSL 278
T+ A K T ++T + GT+L
Sbjct: 128 FLTTVQAADKATAQAAVDAITSLTEADNSPKGTTL 162
>ref|NP_940432.1| Putative membrane anchored protein [Corynebacterium diphtheriae
NCTC 13129]
Length = 534
Score = 35.0 bits (79), Expect = 1.4
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 34/242 (14%)
Query: 38 SKKSHQNAKQDLPAVTEDSV---SLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDK 94
++KS+ +A+ ++P + +L I VS + N SG + + T + +
Sbjct: 64 NQKSNFSAEFEMPESVKAGTGFDALIKIKDISVSND-NLSGYKNAKLTKSSIRI------ 116
Query: 95 NNGSGT-LEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK-VTKKQGSITEETLKA 152
N G L+G++P S +S +N + + ++ +IS+ +T + ++TE TL
Sbjct: 117 NVGKNVKLDGNQPGLSLSNGVLS--INDHLKASLEGNSLRISAAPITVRLQALTEGTLTF 174
Query: 153 NKLDSKKLTRSNGTTLEYS-QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKE---- 207
+ K + + + Y+ T NA K T+K +G + + IK+
Sbjct: 175 --IPEKTILTNTASVDGYTANTTCTTNADKPFATVKVD-PADGLTITAPESASIKQDVQI 231
Query: 208 -GTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTI 266
TV K + DGKV+ F+N A + + ++ D+K + ++F T G+
Sbjct: 232 TATVPEKLNEKMDGKVQFFVNHIAAGD-----------PVPVTEDNKASTSIIFDTSGSK 280
Query: 267 TV 268
T+
Sbjct: 281 TI 282
>ref|NP_992910.1| flagellar hook-associated protein [Yersinia pestis biovar Microtus
str. 91001]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSADVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITITQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|NP_784544.1| cell surface protein precursor [Lactobacillus plantarum WCFS1]
Length = 2139
Score = 34.7 bits (78), Expect = 1.8
Identities = 43/194 (22%), Positives = 78/194 (40%), Gaps = 38/194 (19%)
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET------LKANKLDSKKLTRSNGT 166
++V+ D T++ A ++ + T G + ++T + KL K LT G
Sbjct: 646 ISVNGDTAVTTVDTQTAGTYQVDLQYTDAYGKVWQQTSTVAVAVNQGKLVGKPLTIKMGA 705
Query: 167 TLEYS--QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKV 224
Y+ + D DN+ A ++ +L + V G T + TVTL
Sbjct: 706 KPTYTINDLIDTDNSRNAAGDKLSADELATATVTGLDTSKAGAQTVTL------------ 753
Query: 225 FLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTI---------TVQQYNTAG 275
A ++ TG +T+T+T+ A TK + + + TI +QY T+
Sbjct: 754 -----AYTDDATGMVHTTTTTVTMVA----TKADLTMRNSTIIKGPKNSSWDYRQYVTSV 804
Query: 276 TSLEGSASEIKNLS 289
T +G+ + L+
Sbjct: 805 TDFDGNPVSLDGLN 818
>ref|NP_405405.1| flagellar hook-associated protein [Yersinia pestis CO92]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSADVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITITQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|YP_721957.1| hypothetical protein Tery_2255 [Trichodesmium erythraeum IMS101]
Length = 1374
Score = 34.7 bits (78), Expect = 1.8
Identities = 46/207 (22%), Positives = 73/207 (35%), Gaps = 31/207 (14%)
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
D +T D+ + T+D + + T +G+ T T + D + +
Sbjct: 930 DATSTTDETDTISTNDVTDVTPTTDGTD--------------TTSTTDGTDTTPTTGGTD 975
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
T S T+ T + D+ T GTT + ITDA + T T S
Sbjct: 976 TTPTT-SETDTTPTTDGTDTTLTTDRTGTT-STTDITDATSTTDGTGTT--------STT 1025
Query: 198 VGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWED-------STSTLTISA 250
G T +GT T D + D + TG ST+ +T++
Sbjct: 1026 DGTDTTPTTDGTDTTLTTGGNDTTSTNDVTDATSTTDGTGTTSTTGGNDTASTNDVTVTT 1085
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTS 277
+ D TDGT+T + GT+
Sbjct: 1086 PTTDGTDTTLTTDGTVTTPTTDGTGTT 1112
>ref|YP_720892.1| AAA ATPase, central region [Trichodesmium erythraeum IMS101]
Length = 506
Score = 34.7 bits (78), Expect = 1.8
Identities = 37/151 (24%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 48 DLPAVTE---DSVSLFNGNK---IFVSKEKNSSGKYDLRATIDQVELKGTSDKNNG-SGT 100
D P VT D+++ F G K I +S +N + + + L + N SG
Sbjct: 98 DSPPVTRWLRDAIASFKGTKKTIILMSPVQNVPIELEKEVVVLDFPLPDMKELNQVLSGQ 157
Query: 101 LEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKL 160
L+ +K ++ L L +K+ K G +TE+ + + K+L
Sbjct: 158 LDSAK--NRRISTETREKLLKAALGLTKDEAEKVYRKAQVTAGRLTEKEVDIVLSEKKQL 215
Query: 161 TRSNGTTLEYSQITDADNATKAVETLKNSIK 191
R NG LEY + + NA +E LK+ ++
Sbjct: 216 IRRNG-ILEYIEKDETINAVGGLEELKHWLR 245
>ref|NP_646904.1| truncated FmtB [Staphylococcus aureus subsp. aureus MW2]
Length = 1795
Score = 34.7 bits (78), Expect = 1.8
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G + +N + + NAK D+ AVT + ++ N ++EKN++
Sbjct: 1358 GVDQAKDAGKNSIQSTQPATSVKSNAKNDVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 1416
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 1417 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 1466
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 1467 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 1526
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 1527 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 1564
>ref|NP_419264.1| transcriptional regulator, GntR family [Caulobacter crescentus
CB15]
Length = 247
Score = 34.7 bits (78), Expect = 1.8
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV 138
+R +D + +G + G+GT ++ +KS K L++ T + S +
Sbjct: 59 VRKALDGLVSEGLLTRRQGAGTFVAARVEKSFSK------LSSFTEDMISRGRVPRSEWI 112
Query: 139 TKKQGSITEETLKANKLDSKKLTRSNGTTL-EYSQITDADNATKAVE-TLKNSIKLEGSL 196
++ +G +T E +S L S GT + +++I AD A AVE T + L +
Sbjct: 113 SRSEGQVTPE-------ESLTLGLSPGTPVYRFARIRYADGAPMAVEYTTIAAFALPSTE 165
Query: 197 VVGKTTVEIKEGT 209
VVG + E E T
Sbjct: 166 VVGTSLYEALETT 178
>ref|NP_669772.1| flagellar hook-associated protein [Yersinia pestis KIM]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSADVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITITQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|NP_268962.1| putative extracellular matrix binding protein [Streptococcus
pyogenes M1 GAS]
Length = 2045
Score = 34.7 bits (78), Expect = 1.8
Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 34/289 (11%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
K A+ +K +D LE ++ Q + + V+ G + S + + + D
Sbjct: 533 KAAKQEELKKLHDTTLEKINQDKWLTPDQQAEQLKQAEVTFKKGQEAIKSAQTLTQLETD 592
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK- 137
L + + E KG S + + +K++VKL EA +A+ Q I
Sbjct: 593 LADYVSENEGKGNSIPDKYKSGNKDDLVNKAEVKLK----------EAHEATKQAIEKDP 642
Query: 138 -VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
++ +Q +E KA +LD +LE ++T+ V+ KN +
Sbjct: 643 WLSPEQKKAQKEKAKA-RLDEGLKALKAADSLEILKVTE----EAFVDKEKNPDSIPNQH 697
Query: 197 VVGKTTVEIKEGTVTLKREIEK-----DGKVKVFLNDTAGSNKKTGKWEDSTSTLTISAD 251
G K+ +L +E++K D + ++ A + KK D + A+
Sbjct: 698 KAGTADQARKQALDSLDKEVQKELESIDNDNTLTTDEKAAAKKKVNDAYDVAKQTAMEAN 757
Query: 252 SKKTKDLVFLTD----------GTITVQQYNTAGTSLEGSASEIKNLSE 290
S +DL + D GT Q + A LE EI+ E
Sbjct: 758 S--YEDLTTIKDEFLSNLPHKQGTPLKDQQSDAIAELEKKQQEIEKAIE 804
>ref|YP_866886.1| Hemolysin-type calcium-binding region [Magnetococcus sp. MC-1]
Length = 2469
Score = 34.7 bits (78), Expect = 1.8
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 160 LTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKD 219
+T ++ T+ ++ + + + N+I GS ++G +I+ G V + E
Sbjct: 471 VTSTDAETIYGGDLSGDTSTGDIIHVVTNTIDFTGSTIIGIDYFKIESGQVAIIDSDELS 530
Query: 220 GKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFL-TDGTITVQQYNTAGTSL 278
K ++ G+ T +T+ +D + DL L G +Q Y TA T +
Sbjct: 531 TKDITLMDGDVGA---------GTLRITLQSDGDDSADLSLLDVSGAGVIQFYLTANTDI 581
Query: 279 EGSA 282
G A
Sbjct: 582 TGMA 585
>ref|YP_648210.1| flagellar hook-associated protein 2 [Yersinia pestis Nepal516]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSADVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITITQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|YP_651129.1| flagellar hook-associated protein 2 [Yersinia pestis Antiqua]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSADVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITITQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|YP_434380.1| uncharacterized protein with a C-terminal OMP (outer membrane
protein) domain [Hahella chejuensis KCTC 2396]
Length = 2224
Score = 34.7 bits (78), Expect = 1.8
Identities = 55/236 (23%), Positives = 89/236 (37%), Gaps = 31/236 (13%)
Query: 82 TIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDAS-----NQKISS 136
T+ L +SD N SG + + T + D N + L A + K+ S
Sbjct: 1171 TVSAGTLAVSSDANLSSGVITLDSGVLNLTGATFTVD-NAIVLGAGGGTVGALAGTKVLS 1229
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ---ITDADNATKAVETLK------ 187
V GS ++ A L + T + GT++ + ITD+ N TLK
Sbjct: 1230 GVVSGSGSFSKTGGPALTLSATN-TYTGGTSINGTNGLIITDSANLGSGNVTLKVNSLLS 1288
Query: 188 ---------NSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK 238
N++ +EG + G ++ + K G + L+ GS +TG
Sbjct: 1289 VTGSGVTIANNLVMEGDATLSNANDITWSGVISGSGALAKSGAGTLTLS---GSQTQTGG 1345
Query: 239 WEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA---GTSLEGSASEIKNLSEL 291
+T +++I+ DS + L G++ V SL GS I N S L
Sbjct: 1346 LSITTGSVSIAGDSNLGSGTLTLDGGSLIVTGSGITVDNALSLGGSNGTISNASSL 1401
Score = 33.9 bits (76), Expect = 3.0
Identities = 54/284 (19%), Positives = 112/284 (39%), Gaps = 21/284 (7%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRA 81
+ +G +DL D + DL + + S N N + +S NSS A
Sbjct: 854 QRVGGAVTSDLFGFDVDGAAFSVNGSDLQSFGQSFASFTNANGV-LSITFNSSSTAATTA 912
Query: 82 TIDQVELKGT--SDKNNGSGTLEGSKPDKSKV----------KLTVSADLNTVTLEAFDA 129
+ V + T +D G ++ + D SK + ++ +T +++ D
Sbjct: 913 LVSNVISRITYRNDTPGGDASVRFTLSDGSKSTTADASVQSDSIYITNTTDTASIDRTDG 972
Query: 130 SNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
+ + + G+ T+ + A L ++ ++ ++ ++L S D D+A+ A + +
Sbjct: 973 VSFSEAIAIANADGTGTQTLILAGALAAQTISATSASSLVESLTLDLDSASGATIS-GGT 1031
Query: 190 IKLEGSLVVGKTTVEIKEGTVTL----KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTST 245
+ L G + + G++ + K G + L G+ +G S
Sbjct: 1032 LTLGGGVTLTMNNGSGDTGSIGTVFAGTGSLSKTGAGALTLT---GAQTYSGTTTISAGA 1088
Query: 246 LTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
L+I++DS + L GT+TV T ++ +A ++S
Sbjct: 1089 LSIASDSNVGSGQLVLNGGTLTVTGSTTINNAIHVAADSTFSVS 1132
>ref|YP_300225.1| cell wall-anchored protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 2316
Score = 34.7 bits (78), Expect = 1.8
Identities = 50/241 (20%), Positives = 91/241 (37%), Gaps = 25/241 (10%)
Query: 22 ESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRA 81
ESI +K + E+S N + E S+ L + ++ N K +L +
Sbjct: 149 ESIEDRKTEESTTEESKAVEEANKENTTEKNDEGSLDLEKEKDTYKDEKDNGKKKNELES 208
Query: 82 TIDQVELKGTSD--KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
++E K + KNN LE + +K ++ ++ +A+ + + V
Sbjct: 209 HNHRIENKVEDNVYKNNKETNLESKNENVNKDDKVNTSSSTSIEKPEDNATRSNLINSVN 268
Query: 140 ---KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLK-NSIKLEGS 195
K+ + T K + L++ T +N T A +A KA+E L + K
Sbjct: 269 HSLKQLDNAKNNTEKQSLLENYYQTHTNAT---------ASDAKKAIEKLNIDFTKQNSD 319
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKT 255
++ +E L +++KD KV N A +T S T T + +
Sbjct: 320 QLIALLLIE-------LANQMDKD---KVQANVPASKRAETNNESLSIETNTTNIEKTLA 369
Query: 256 K 256
K
Sbjct: 370 K 370
>ref|YP_424804.1| hypothetical protein MCAP_0862 [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 750
Score = 34.7 bits (78), Expect = 1.8
Identities = 59/285 (20%), Positives = 117/285 (41%), Gaps = 33/285 (11%)
Query: 18 QKGAESIGSQKE--NDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSG 75
Q ++SI KE ND++ +++K +++L V + + I + E N S
Sbjct: 100 QLSSDSIRINKELKNDIDQMNNNKVESDRLEKELKEVEKQIYKVL----IELINESNLSE 155
Query: 76 KYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQ-KI 134
K + +A D ++ K LE + K L++ +L L+ + I
Sbjct: 156 KLNKKAN-DLIKQKED---------LETKQNLTKKELLSIEHNLKNARLKYLNLETTLSI 205
Query: 135 SSKVTKKQGSITEETLKANKLDSK------KLTRS-NGTTLEYSQITDADNATKAVETLK 187
K K S+T E K ++ + L+ S N TLE S+ TD K + T++
Sbjct: 206 LKKYNKDHKSLTSEVEKLKNINKELENNIQSLSDSKNKLTLEISK-TDQ----KILTTIE 260
Query: 188 NSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLT 247
+++ L +++ LK + + K+K+ L D +N+K W +
Sbjct: 261 KQKEIKNQL--SDKQQQVQTANNLLKEKSDNLNKLKMELEDL--NNQKVQNWSNELKGFL 316
Query: 248 ISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELK 292
+ KK +++ + + N+ +L+ + E++N + K
Sbjct: 317 AQQEKKKIDLETEISNNKKIISELNSQLANLKKESMELENTNSSK 361
Score = 33.1 bits (74), Expect = 5.2
Identities = 47/224 (20%), Positives = 91/224 (40%), Gaps = 31/224 (13%)
Query: 33 NLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGT- 91
N + S S +++ E+++ + +K ++ E + + + L Q E+K
Sbjct: 210 NKDHKSLTSEVEKLKNINKELENNIQSLSDSKNKLTLEISKTDQKILTTIEKQKEIKNQL 269
Query: 92 SDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLK 151
SDK T +KS +LN + +E D +NQK+ + + +G + ++ K
Sbjct: 270 SDKQQQVQTANNLLKEKSD-------NLNKLKMELEDLNNQKVQNWSNELKGFLAQQEKK 322
Query: 152 ANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT 211
L+ T+ N K + L + + + K ++E++ +
Sbjct: 323 KIDLE-----------------TEISNNKKIISELNSQL-----ANLKKESMELENTNSS 360
Query: 212 LKREI-EKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
+ EI EK KV+V + A ++ K E S S L +KK
Sbjct: 361 KEIEIKEKQKKVEVLNKEIASKKEELEKLELSISDLRSEILNKK 404
>ref|YP_341300.1| AsmA protein [Pseudoalteromonas haloplanktis TAC125]
Length = 649
Score = 34.7 bits (78), Expect = 1.8
Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 46/220 (20%)
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK 137
+L AT+D +++KG S+ N G +L V A+++ L+ N +
Sbjct: 300 ELIATLDALQIKGKSELNLGK-------------RLAVMANIDLGMLDL----NPYLPET 342
Query: 138 VTKKQGSITEETLKA---------------NKLDSKKLTRSNG-----TTLEYSQITDAD 177
V KK+ T+ET A N LD+ + RS+G L +Q T A
Sbjct: 343 VAKKEQPTTDETKPAEPIVWDDTKIDLSALNTLDANVVIRSSGLKANDIKLGANQFTVAL 402
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKD---GKVKVFLNDTAGSNK 234
+ A +L N EG+ GK + I + K D + L D AG +K
Sbjct: 403 KNSVAKLSLDNFAAYEGT---GKGAININAQQIPYKITTNFDLAGIDAQPLLTDAAGFDK 459
Query: 235 KTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTA 274
G + + ++ + + K+ V +G + + N A
Sbjct: 460 LMG---NGSLNWNLTTNGQSQKEFVNALNGELGFEFANGA 496
>ref|YP_393080.1| Flagellar hook-associated protein [Thiomicrospira denitrificans
ATCC 33889]
Length = 628
Score = 34.7 bits (78), Expect = 1.8
Identities = 57/288 (19%), Positives = 118/288 (40%), Gaps = 49/288 (17%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNG---NKIFVSKEKNSSGK 76
GA+SI Q +++ + +S N K ++ + ++ +G + I +S +KNS+G
Sbjct: 218 GADSISGQINSNIIINSAS-----NEKNGSYTLSVNGFNIVDGGTYHPIHISSDKNSNGF 272
Query: 77 YDLR--------ATIDQ----------VELKGTSDKNNGSGTLEGSKPDKSKVKLTVSAD 118
Y+L +D+ ++L+G + N SGT K V +
Sbjct: 273 YELSYERQDGVLIAMDEKIPGGRIGAILDLRGDKIEGNSSGTPSNGTLQK------VLDE 326
Query: 119 LNTVTLEAFDASNQKISSKVTKKQGSITEETLKANK----LDSKKLTRSNGTTLEYSQIT 174
LN +++N +S TK S++ + + N LDS R+ + I
Sbjct: 327 LNAFATTLIESTNNLYASSATK---SMSSKNISINPTLPILDSNLNIRAGAFDIVIYDI- 382
Query: 175 DADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNK 234
D + + + V + N + G V G ++ +G + +++ D ++D +
Sbjct: 383 DGNESARRVININNLTTMNG--VAGSNSI---QGQIIDQKDDNADANANNDIDDFMQFHW 437
Query: 235 KTGKWEDSTSTLTISADSK-KTKDLVFLTDGTITVQQYNTAGTSLEGS 281
T ++ + L + DS K F + + Q++ +G++ G+
Sbjct: 438 AT--YQGGGNALELVMDSSYGAKGYTFSIEDNLKTNQFD-SGSNFAGA 482
>ref|YP_456280.1| hypothetical protein AYWB_084 [Aster yellows witches'-broom
phytoplasma AYWB]
Length = 392
Score = 34.7 bits (78), Expect = 1.8
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 36/165 (21%)
Query: 140 KKQGSITEETLKANKLDSK-------KLTRSNGTTLEYSQITDADNATKAVETLKNSIKL 192
K G + ++T K N ++ K T S+G +EY+ I L +
Sbjct: 116 KNNGLLLKKTDKYNNIEEYGSHGKLIKKTLSDGVWMEYNPINSK---------LMKRKNI 166
Query: 193 EGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS 252
+GS+ E + K EI+K+GKVK F KT ++ +++++
Sbjct: 167 DGSIE------EFDHNSERFK-EIDKNGKVKYF---------KTKIYQTVLDFKKLNSNA 210
Query: 253 KKTKDLVF----LTDGTITVQQYNTAGTSLEGSASEIKNLSELKN 293
++ KD+ F L D T ++ AG SL+ + +L ELK+
Sbjct: 211 RQLKDIGFTLQQLKDAGYTAKELTDAGFSLQELKATGFSLQELKS 255
>ref|YP_567649.1| signal recognition particle protein [Rhodopseudomonas palustris
BisB5]
Length = 517
Score = 34.7 bits (78), Expect = 1.8
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 17/153 (11%)
Query: 48 DLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPD 107
D+ ++ E + S + K + EK GK+DL +Q+E K G G L G P
Sbjct: 299 DVVSLVEKAASTLDAEKAAAAVEKMRKGKFDLADMREQLE---QMTKMGGIGGLMGMMPG 355
Query: 108 KSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTT 167
SK+K ++A + KV K+Q +I + + + + L S
Sbjct: 356 ISKMKNQIAA--------------AGVDDKVLKRQVAIIDSMTREERKNPDILKASRKKR 401
Query: 168 LEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ K ++ +N + ++ GK
Sbjct: 402 IAAGAGIKVEDVNKLLKMHRNMADMMKAVGRGK 434
>ref|YP_281924.1| putative extracellular matrix binding protein [Streptococcus
pyogenes MGAS5005]
Length = 2059
Score = 34.7 bits (78), Expect = 1.8
Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 34/289 (11%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
K A+ +K +D LE ++ Q + + V+ G + S + + + D
Sbjct: 547 KAAKQEELKKLHDTTLEKINQDKWLTPDQQAEQLKQAEVTFKKGQEAIKSAQTLTQLETD 606
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSK- 137
L + + E KG S + + +K++VKL EA +A+ Q I
Sbjct: 607 LADYVSENEGKGNSIPDKYKSGHKDDLVNKAEVKLK----------EAHEATKQAIEKDP 656
Query: 138 -VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
++ +Q +E KA +LD +LE ++T+ V+ KN +
Sbjct: 657 WLSPEQKKAQKEKAKA-RLDEGLKALKAADSLEILKVTE----EAFVDKEKNPDSIPNQH 711
Query: 197 VVGKTTVEIKEGTVTLKREIEK-----DGKVKVFLNDTAGSNKKTGKWEDSTSTLTISAD 251
G K+ +L +E++K D + ++ A + KK D + A+
Sbjct: 712 KAGTADQARKQALDSLDKEVQKELESIDNDNTLTTDEKAAAKKKVNDAYDVAKQTAMEAN 771
Query: 252 SKKTKDLVFLTD----------GTITVQQYNTAGTSLEGSASEIKNLSE 290
S +DL + D GT Q + A LE EI+ E
Sbjct: 772 S--YEDLTTIKDEFLSNLPHKQGTPLKDQQSDAIAELEKKQQEIEKAIE 818
>ref|YP_070239.1| flagellar hook-associated protein [Yersinia pseudotuberculosis IP
32953]
Length = 466
Score = 34.7 bits (78), Expect = 1.8
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 15/167 (8%)
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD 177
DLNT+ L A+ Q + +T +Q S KLT +++ A
Sbjct: 14 DLNTL-LSQLSAAEQTRLTPLTTQQTSY-----------KSKLTAYGVLQSALAKLETAS 61
Query: 178 NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLN-DTAGSNKKT 236
A K +TL NS + GS T + T E+ K + L+ D + K
Sbjct: 62 TALKKADTL-NSTAVSGSNSAFSATTDSAASAGTYSIEVTNLAKAQSLLSTDVPSATDKL 120
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
G D+T T+TI+ +K + LT ++ A EGS +
Sbjct: 121 GS-SDATRTITIAQPGQKEPMKISLTSEQTSLTGIRDAINKQEGSVN 166
>ref|YP_194478.1| surface protein [Lactobacillus acidophilus NCFM]
Length = 1924
Score = 34.7 bits (78), Expect = 1.8
Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 131 NQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
N + SK Q + + + A + K ++N TT TD+ + + L
Sbjct: 62 NTEQQSKTDGTQSAEEQSSADAGNAQNNKSAKANATTPSNQNATDSKLTQSSAQDLSKDN 121
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISA 250
S +T E+K+ ++ E K + +V N+TA K +T+TL ++
Sbjct: 122 VNSDSKNASDSTSEVKQNNQAIQPETSKPSR-EVENNETA----KNASASQTTNTLNVNK 176
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNAL 295
S+ G+ +V N S + E+K+ ++ K A+
Sbjct: 177 ASETQ-----AKSGSESVTSPNKGLVSENKAKVEVKSSTQPKAAM 216
>ref|YP_305071.1| 60 kDa chaperonin [Methanosarcina barkeri str. fusaro]
Length = 536
Score = 34.7 bits (78), Expect = 1.8
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 16/162 (9%)
Query: 95 NNGSGTLEGSKPDKSKVKLTVS---ADLNTVTLEAFDASNQKISSKV-----TKKQGSIT 146
NN + +EG K DK+K+K VS A +N +E +K +K+ K G+ T
Sbjct: 326 NNKTIIVEG-KGDKAKIKERVSLIEAQINIADVEYKKTELKKRQAKLGGGVAVIKVGAAT 384
Query: 147 EETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVE-- 204
E LK K+ + +E + + + +S+KLEG +G V+
Sbjct: 385 ETELKEKKMRIDDALNATKAAVEEGVVIGGGISLFRAAAILDSLKLEGDREIGVKIVQRA 444
Query: 205 IKEGTVTLKREIEKDG-----KVKVFLNDTAGSNKKTGKWED 241
I+E + K+G ++ + G N K +ED
Sbjct: 445 IEEPVRQIAENAGKEGAEVVATIRAEPRELFGYNAKKDVFED 486
>ref|NP_439873.1| Hsf-like protein [Haemophilus influenzae Rd KW20]
Length = 1020
Score = 34.3 bits (77), Expect = 2.3
Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 55 DSVSLFNGNKIFVSKEKNSSGKYDLR---ATIDQVELKGTSDKNNGSGT------LEGSK 105
D V+L G+ + V K++ ++ Y LR + VE K T + NG+ T L +
Sbjct: 817 DKVTLKAGDNLKV-KQEGTNFTYVLRDELTGVKSVEFKDTENGANGASTKITKDGLTFTP 875
Query: 106 PDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDS--KKLTRS 163
+ + AD V + A N+ + + + + + + + ++L + K +T
Sbjct: 876 ANGANGAAATDADKIKVASDGIRAGNKAVKNVAAGEISATSTDAINGSQLYAVAKGVTNL 935
Query: 164 NGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG--KTTVEIKEGTVTLKREIEKDGK 221
G + + DA A+ + + G +V ++ + + G I +GK
Sbjct: 936 AGQVNKVGKRADAGTASALAASQLPQASMPGKSMVSIAGSSYQGQSGLAIGVSRISDNGK 995
Query: 222 VKVFLNDTAGSNKKTG 237
V + L+ T S KTG
Sbjct: 996 VIIRLSGTTNSQGKTG 1011
>ref|NP_831846.1| hypothetical Membrane Spanning Protein [Bacillus cereus ATCC 14579]
Length = 1243
Score = 34.3 bits (77), Expect = 2.3
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 152 ANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT 211
ANK+ S + T S E + +TDA K + +K + + + GK +I+E +
Sbjct: 286 ANKIISNQFTFSEK---EPNILTDASAIQKYLADVKKQVSEYDTELAGKLESDIQETVIK 342
Query: 212 -LKREIEKDGKVKVFLN 227
LK+ + DGK ++F+N
Sbjct: 343 KLKQSMSNDGKQEIFIN 359
>ref|YP_719397.1| hypothetical protein HS_1185 [Haemophilus somnus 129PT]
Length = 239
Score = 34.3 bits (77), Expect = 2.3
Identities = 55/215 (25%), Positives = 81/215 (37%), Gaps = 20/215 (9%)
Query: 71 KNSSGKYDLRATIDQVELKGTSDKNNGSGTLEG---SKPDKSKVKLTVSADLNTVTLEAF 127
+++S Y A D+V+ K + K + L KPD + T A NTV ++
Sbjct: 2 QSTSVTYGQEADNDEVKKKVEAAKEANTTILNNILDGKPDSNDASSTSIAH-NTVNVQDL 60
Query: 128 DASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA----- 182
+ I K QG+ E L + KL G + IT ADN K
Sbjct: 61 SEVEKAIVEKGLIFQGN---EDLVSRKLGEPLNIVGKGDKAK--DITVADNNIKVSKKAN 115
Query: 183 VETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDS 242
V K L +L +G + T+T + I KD + N N TG +
Sbjct: 116 VTPAKTDETLADTLEIGLSE------TLTGIKSIGKDNNSILVFNSGKSENSGTGDTGGT 169
Query: 243 TSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTS 277
+ + SA + K + V T T Q NT T+
Sbjct: 170 SENVGTSATNSKVELKVDGVSLTFTPVQNNTNATA 204
>ref|YP_696015.1| hypothetical protein CPF_1572 [Clostridium perfringens ATCC 13124]
Length = 832
Score = 34.3 bits (77), Expect = 2.3
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 17/173 (9%)
Query: 131 NQKI---SSKVTKKQGSITEETLKANKLDSKKLTR-SNGTTLEYSQITDADNATKAVETL 186
N+K+ +S T ++ +AN ++SK L S T+L + ++ D A + ET+
Sbjct: 146 NEKLKENTSSATNANSNLESNITEANNINSKLLENTSTATSLNKNLESNIDLAKEVKETI 205
Query: 187 KNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND----------TAGSNKKT 236
K+ L+ + +E G + E+ + + LN A +N
Sbjct: 206 KD---LDTKNIESTEKIETLTGLNSKAEELSNNINKGLPLNSELIKNVESAKVANTNLAA 262
Query: 237 GKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLS 289
E ++ + A +KTK+ + DG+ + Q T L+ + LS
Sbjct: 263 TNQEATSKNTELQASLEKTKEFIEGLDGSQNIPQIRMDVTELQNGLKSNQALS 315
>ref|NP_563023.1| hypothetical protein CPE2107 [Clostridium perfringens str. 13]
Length = 1081
Score = 34.3 bits (77), Expect = 2.3
Identities = 68/298 (22%), Positives = 114/298 (38%), Gaps = 45/298 (15%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
K A G+ D L++ + K ++N ++ V ED+ L + F + + +
Sbjct: 396 KDAALKGNYLTYDEYLKNENSKEYKNRPYNVKEVLEDN--LLGDAQNFRTVLGLETPSLE 453
Query: 79 LR-ATIDQVELKGTSD----KNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQK 133
++ A +D+ + +SD KN S T+ G + K ++ + + + K
Sbjct: 454 VKSAVMDKDLILESSDESYLKNIKSITINGGIKELDKSLYSIKDNQLIINSKVVKGDKIK 513
Query: 134 ISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITD-ADNATKAVETLKNSIKL 192
I T + + E L+ D T E +T +++ K + NSIKL
Sbjct: 514 ILISATGYKDKVIEIKLEKILDDINLKLEKEYKTGEAVVVTGLSEDFIKNI----NSIKL 569
Query: 193 EGSLVV--------GKTTVEIKEGTVTLKREIEKD-------------GKVKVFLNDTAG 231
+G L++ G T EI E +TLK + K+ GK ++ N T G
Sbjct: 570 DGKLLLTKEQGGSSGNTYYEISENKLTLKSGLFKEDKNYKLEIDSRYYGKKELEFNITKG 629
Query: 232 SNKKTGKWE-----DSTSTLTISADSKKT----KDLVFLTDGTITVQQYNTAGTSLEG 280
K K E + + DSK T D+ FL G N G S+ G
Sbjct: 630 DQKSNEKTEIIEEKKELPKIDVKIDSKSTFMKKYDIKFLNSGEWI---NNITGVSVNG 684
>ref|NP_561136.1| hypothetical protein CPE0220 [Clostridium perfringens str. 13]
Length = 743
Score = 34.3 bits (77), Expect = 2.3
Identities = 65/284 (22%), Positives = 119/284 (41%), Gaps = 51/284 (17%)
Query: 24 IGSQKEN-DLNLEDSSKKSH-QNAKQDLPAV------TEDSVSLFNGNKIFVSKEKNSS- 74
IG+ KE+ +L +E S S ++ K ++P V DS F+ + V+ K ++
Sbjct: 189 IGTDKEDSNLKVEISGDTSFVKDGKAEIPGVYPITYKVTDSSGQFDEKTVNVTVNKKTTL 248
Query: 75 --GKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQ 132
G Y L+ T+ V G + G+ D S++ +S NTVTL N
Sbjct: 249 GDGSYTLKNTVQYV---GQGNMETGNSMARKVLSDDSRID--ISNGKNTVTL----TFNS 299
Query: 133 KISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKL 192
++ + + ++ E ++A + + N L N+ V TL + +
Sbjct: 300 ELYAFLKNFNVTVDGEKVEAEVNKDNRTIKFNIPDL---------NSDIVVSTL---VSM 347
Query: 193 EGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTA-GSNKKTGKWEDSTSTLTISAD 251
G V KTT+ + L+ +E + K N+ G N+ +G ++S +T + S
Sbjct: 348 MGKEVSFKTTLNY-DTAKKLEDNLEDNNKPGNEDNENIPGENENSGNQDNSGNTNSGS-- 404
Query: 252 SKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNAL 295
+G+ + N + EGS+ EI + ++LKN +
Sbjct: 405 -----------NGSANEDKENES----EGSSGEIVDANQLKNGI 433
>ref|NP_712640.1| integrin homolog [Leptospira interrogans serovar Lai str. 56601]
Length = 1137
Score = 34.3 bits (77), Expect = 2.3
Identities = 51/217 (23%), Positives = 85/217 (39%), Gaps = 39/217 (17%)
Query: 27 QKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQ- 85
QKE DL + D +S ++ K++ GN+I + SG D I +
Sbjct: 585 QKEGDL-VSDRLGESLRHIKEE-------------GNEILQTLRVEFSGTIDKMEQIVKK 630
Query: 86 ----VELKGTSDKNNGSGTLEGSKPDKSKV--KLTVSADLNTVTLEA-FDASNQKISSKV 138
+E+ KNN +LE S D +V +L SA++ E N+ I SK+
Sbjct: 631 NEKVLEIHAEKIKNNVESSLENSSRDAERVLDRLRDSAEVFFEKQEEKISRLNETIDSKI 690
Query: 139 TKKQGSITEE-----------------TLKANKLDSKKLTRSNGTTLEYSQITDADNATK 181
+K+ S+ ++ +K N +S K +R + N
Sbjct: 691 SKQLTSLMDKGQLQLGQLEDRISKYILDVKKNLEESLKNSRKDNDDQMKGFQQQLQNQLY 750
Query: 182 AVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEK 218
+ET I G + +E KE + LKR++E+
Sbjct: 751 EMETAAQEILRSGKEEFDGSMMEYKELQMNLKRDLEE 787
>ref|NP_464920.1| hypothetical protein lmo1395 [Listeria monocytogenes EGD-e]
Length = 309
Score = 34.3 bits (77), Expect = 2.3
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 104 SKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRS 163
+K D S K V D N T++ D++ K +SK T+K+ + T E D K+ T
Sbjct: 140 NKQDNSTEK--VKTDTNNPTVKVEDSTKSKDTSKDTEKKDTTTNEDKSTETKDKKEDTAK 197
Query: 164 NGTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
+E ++ + NAT T+KN+ K+ SL
Sbjct: 198 E---VEVTKGETSGNAT--TYTVKNTDKMTLSL 225
>ref|YP_186963.1| fmtB protiein [Staphylococcus aureus subsp. aureus COL]
Length = 2478
Score = 34.3 bits (77), Expect = 2.3
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G + +N + + NAK D+ AVT + ++ N ++EKN++
Sbjct: 1355 GVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 1413
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 1414 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 1463
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 1464 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 1523
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 1524 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 1561
>ref|YP_500880.1| hypothetical protein SAOUHSC_02404 [Staphylococcus aureus subsp.
aureus NCTC 8325]
Length = 2478
Score = 34.3 bits (77), Expect = 2.3
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G + +N + + NAK D+ AVT + ++ N ++EKN++
Sbjct: 1355 GVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 1413
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 1414 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 1463
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 1464 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 1523
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 1524 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 1561
>ref|YP_494755.1| truncated FmtB protein [Staphylococcus aureus subsp. aureus USA300]
Length = 1293
Score = 34.3 bits (77), Expect = 2.3
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G + +N + + NAK D+ AVT + ++ N ++EKN++
Sbjct: 170 GVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 228
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 229 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 278
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 279 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 338
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 339 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 376
>ref|YP_536584.1| Oligopeptide-binding protein oppA [Lactobacillus salivarius subsp.
salivarius UCC118]
Length = 537
Score = 34.3 bits (77), Expect = 2.3
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 23/224 (10%)
Query: 43 QNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLE 102
Q+ K D+ ++ + G K + ++++ + L+ + E K + + S L
Sbjct: 257 QSGKLDVAVLSAEQTKQLKGQKNYTVFHESTT--FYLQYNQTKEEFKNANIRKAIS--LA 312
Query: 103 GSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTR 162
++ D KV + +VT N K + + +T KA +L +K L
Sbjct: 313 INRKDYLKVLGGENTAATSVTPVGLTKVNGKDFQSIVSDKTDMTYNKAKAKELFNKGLQE 372
Query: 163 SNGTTLEYSQIT-DADNATKAVETLKNSIK--LEGSLVVGKTTVEIKEGTVTLKREIEKD 219
LE++ +T D D A K+VE L++ +K + V TV K L R D
Sbjct: 373 LGKDKLEFAILTDDTDGAKKSVEALQSQLKEAFGDKVTVNTQTVPFK---TRLSRSTSGD 429
Query: 220 GKVKV------------FLN-DTAGSNKKTGKWEDSTSTLTISA 250
V + FL+ T+ + + GKW ++ I+A
Sbjct: 430 FDVVLSAWGADFADPISFLDLFTSNNEQNNGKWSNAEYDKLIAA 473
>ref|YP_672417.1| probable hemagglutinin-related protein [Escherichia coli 536]
Length = 3242
Score = 34.3 bits (77), Expect = 2.3
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 16/182 (8%)
Query: 113 LTVSADL---NTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLE 169
LT + D+ +T+TL NQ ++++ K S TLKA+ + + + N TT+
Sbjct: 951 LTSAGDITGVDTLTLTV----NQTLNNQANGKLLSAGVLTLKADSVTNDGQLQGNATTIT 1006
Query: 170 YSQITDADNATKAVETLKNSIKLE---GSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFL 226
Q+T+ + TL S + G +++ + + + T++ + I+ G V + +
Sbjct: 1007 AGQLTNGGHLQGETLTLAASGGVNNRFGGVLMSRNALNVSTATLSNQGTIQGGGGVSLNV 1066
Query: 227 NDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNT--AGTSLEGSASE 284
D ++ K S S LT++A + T+ + NT G L +++
Sbjct: 1067 TDRLQNDSKI----LSGSNLTLTAQVLANTGSGLVQAATLLLDVVNTVNGGRVLATGSAD 1122
Query: 285 IK 286
+K
Sbjct: 1123 VK 1124
>ref|YP_483975.1| signal recognition particle protein [Rhodopseudomonas palustris
HaA2]
Length = 514
Score = 34.3 bits (77), Expect = 2.3
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 17/153 (11%)
Query: 48 DLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPD 107
D+ ++ E + S + K + EK GK+DL +Q+E K G G L G P
Sbjct: 299 DVVSLVEKAASTLDAEKAAAAVEKMRKGKFDLADMREQLE---QMTKMGGIGGLMGMMPG 355
Query: 108 KSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTT 167
SK+K ++A + K+ K+Q +I + + + + L S
Sbjct: 356 ISKMKNQIAA--------------AGVDDKILKRQVAIIDSMTREERKNPDILKASRKKR 401
Query: 168 LEYSQITDADNATKAVETLKNSIKLEGSLVVGK 200
+ ++ K ++ +N + ++ GK
Sbjct: 402 IAAGAGIKVEDVNKLLKMHRNMADMMKAVGRGK 434
>ref|YP_394786.1| Hypothetical cell surface protein precursor [Lactobacillus sakei
subsp. sakei 23K]
Length = 294
Score = 34.3 bits (77), Expect = 2.3
Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 35/201 (17%)
Query: 82 TIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKK 141
T D + D N+ + + + + + + T A L+ V +A+ + ++T++
Sbjct: 89 TFDATGHNVSIDSNDRHASYKNTDTNMTAILNTDDAKLSEVKGKAWATV---VDKRITRE 145
Query: 142 QGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKT 201
ET K T+ +GT + D ATK ET+ N+ L + G+T
Sbjct: 146 NNDPEGETAKT--------TKQSGTWQLKVKSDDVLTATKNGETINNANLLLKNTAYGRT 197
Query: 202 -------------------TVEIKE-GTVTLKREIEKDGKVKVFL----NDTAGSNKKTG 237
T++ K+ T+T + DGK + L D+ G
Sbjct: 198 ADVFTLTNDAQDSDFQADPTIDDKDVSTITNNVSLSLDGKGEEVLVADAADSEGQGANVF 257
Query: 238 KWEDSTSTLTISADSKKTKDL 258
W+ S LT+ DSK D+
Sbjct: 258 GWDHSDINLTLPKDSKVGNDI 278
>ref|NP_346696.1| Hypothetical protein, CF-17 family [Clostridium acetobutylicum ATCC
824]
Length = 191
Score = 34.3 bits (77), Expect = 2.3
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 105 KPDKSKVKLTVSADLNTVTLEAFDASNQK-ISSKVTKKQGSITEETLKANKLDSKKLTRS 163
K ++ K+ + + + VTL D++N+K +S+K TK + + T K + K T
Sbjct: 2 KKNRIKIIVAILGVVTVVTLAGCDSANKKSVSTKNTKSTSA--KRTKKDESIKKDKYTYD 59
Query: 164 NGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVK 223
+ ++ + E ++G+ KE + + G++
Sbjct: 60 DFKKVKIGMTYN-----------------EAKKILGEGN---KESDILYTWRDSEGGEID 99
Query: 224 VFLNDTAGSNKKTGKWEDSTSTLT----ISADSKKTKD---LVFLTDGTITVQQYNTAG 275
+ ND SN K + + T+ +T S +T D +F T+GT+ + YN G
Sbjct: 100 IVYNDGKASNVKEERLDKDTTKVTHEQYDKIQSNQTYDDVKAIFGTEGTVIEKGYNANG 158
>ref|YP_427694.1| hypothetical protein Rru_A2610 [Rhodospirillum rubrum ATCC 11170]
Length = 1313
Score = 34.3 bits (77), Expect = 2.3
Identities = 43/200 (21%), Positives = 79/200 (39%), Gaps = 27/200 (13%)
Query: 88 LKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITE 147
LK + +N+G+ ++ + + ++ +A N LEA D IS + G+ +
Sbjct: 691 LKNAAARNSGATSI-----NDTIFQIGTAAAGNGNALEAGDTVTLDISD-LLDGAGTALK 744
Query: 148 ETLKANKLDSKKLTRSN-----------GTTLEYSQITDADNATKAVETLKNSIKLEGSL 196
TL A ++D+ LT +N T + + +T D A + + ++ + G +
Sbjct: 745 ATLGARQIDTSTLTAANVTVNYVVNGAAATAAQIALVTATD--ANAADVMNSAANMTGGV 802
Query: 197 VVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTK 256
V T + V L G TAG+N S + T++ + T+
Sbjct: 803 VAPTTGGVVAPVVVALTAGGSFTG--------TAGTNDTFQGTVASLNGTTVTGTAADTE 854
Query: 257 DLVFLTDGTITVQQYNTAGT 276
L GT+ + T GT
Sbjct: 855 TLQLTDAGTVAINNGTTGGT 874
>ref|NP_988671.1| signal recognition particle protein Srp54 [Methanococcus
maripaludis S2]
Length = 450
Score = 34.3 bits (77), Expect = 2.3
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 12/103 (11%)
Query: 187 KNSIKLEGSLVVGKTTVEI-KEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTST 245
K ++ L G KT VEI KEG LK KV V + DTAG +K+ E +
Sbjct: 153 KINVPLFGDETRTKTPVEITKEGMEKLK-------KVDVIIIDTAGRHKEE---EGLLAE 202
Query: 246 LTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNL 288
+ D +++ + DGT+ Q N A + + S SEI ++
Sbjct: 203 MKEMKDLTNPNEIILVIDGTLGQQAKNQA-KAFKESVSEIGSI 244
>ref|NP_950780.1| hypothetical protein PAM528 [Onion yellows phytoplasma OY-M]
Length = 260
Score = 34.3 bits (77), Expect = 2.3
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 38/162 (23%)
Query: 140 KKQGSITEETLKANKLDSK-------KLTRSNGTTLEYSQITDADNATKAVETLKNSIKL 192
K G + ++T + N ++ K T S+G +EY+ + K ++ NSI+
Sbjct: 116 KNNGLLLKKTDRYNNVEEYGSHGKLIKKTLSDGVWMEYNPVNQKLMKRKNID---NSIE- 171
Query: 193 EGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS 252
E + K EI+K+GKVK F KT +++ + ++
Sbjct: 172 -----------EFDDNEEKFK-EIDKNGKVKFF---------KTKLYQNISDFKKLNLTI 210
Query: 253 KKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSELKNA 294
++ KD+ F T QQY +AG ++E S ELK+A
Sbjct: 211 EQLKDIGF------TFQQYKSAGYTVEQLKSVGFGAKELKDA 246
>ref|NP_687455.1| cell wall surface anchor family protein [Streptococcus agalactiae
2603V/R]
Length = 1055
Score = 33.9 bits (76), Expect = 3.0
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 26 SQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQ 85
SQ+ L E+S K+ + + ED N K VSKE + T+D+
Sbjct: 22 SQEVYGLEREESVKQEQTQSASEDDWFEED-----NERKTNVSKENS---------TVDE 67
Query: 86 V--ELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQG 143
+L + NN S E D +V VT EA ++SN +V K+
Sbjct: 68 TVSDLFSDGNSNNSSSKTESVVSDPKQVPKAKPE----VTQEASNSSNDASKVEVPKQDT 123
Query: 144 SITEETLKANKLDSKKLTRSNGTTLEYSQ 172
+ +ETL+ + ++K T + +S+
Sbjct: 124 ASKKETLETSTWEAKDFVTRGDTLVGFSK 152
>ref|NP_696481.1| peptidoglycan synthetase; penicillin-binding protein 3 precursor
[Bifidobacterium longum NCC2705]
Length = 600
Score = 33.9 bits (76), Expect = 3.0
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 95 NNGSGTL--EGSKPDKSKVKLTVSADLNTVTLEAFDAS---NQKISSKVTKKQGSITEET 149
NN T+ +G K +S +K T A+ T + +A+ ++K++S + S+ E
Sbjct: 447 NNVVATIANKGVKQQQSIIKSTTDANGKTTETKKGEATRVVDEKVASDMMNAMESVAEGY 506
Query: 150 LKANKLDSKKLTRSNGTT-------------LEYSQITDADNATKAVE-TLKNSIKLEGS 195
K K+D ++ +GT +YS + ADN AV +K+ + G
Sbjct: 507 NKFVKVDGYRMAAKSGTAEVQGSDGTLSSIISDYSVVIPADNPRYAVTVVMKDPNGVFGG 566
Query: 196 LVVGKTTVEIKE 207
L G + +I E
Sbjct: 567 LTAGPVSAQICE 578
>ref|YP_818877.1| hypothetical protein LEUM_1411 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 1002
Score = 33.9 bits (76), Expect = 3.0
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 72 NSSGKYDLRATID-QVELKGTSDKNNGSGTLEGSKPDKS-------------KVKLTVSA 117
N+ K ++ T+D + T+ +N + T E S DK+ KV T++
Sbjct: 69 NTVNKQEVAETVDTKNSTADTTSTDNKTTTTENSTADKTANTTEKTENSADAKVDDTITT 128
Query: 118 DLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKL---TRSNGTT---LEYS 171
D+ T ++ A ++++S + Q + ++++ ++ L+SKK+ T ++GT+ + Y+
Sbjct: 129 DVKTTDIKTESAEAKEVNSNQQEYQTTNIDDSI-SSALNSKKIVIRTNTDGTSTTQITYA 187
Query: 172 QITD-ADNA-TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVT 211
D ADN T+A N+ ++ + TT + G VT
Sbjct: 188 NFQDVADNLNTEASVPYFNADAVKN--IPAATTANAETGDVT 227
Score = 32.7 bits (73), Expect = 6.7
Identities = 30/128 (23%), Positives = 47/128 (36%)
Query: 160 LTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKD 219
L+ + G+ + A NAT + T + SI S T K+E+ +
Sbjct: 20 LSIATGSATVQADTVTAANATTSKTTDQESISTTTSDTTEIQTEPDDASNTVNKQEVAET 79
Query: 220 GKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLE 279
K DT ++ KT E+ST+ T + K D TIT T +
Sbjct: 80 VDTKNSTADTTSTDNKTTTTENSTADKTANTTEKTENSADAKVDDTITTDVKTTDIKTES 139
Query: 280 GSASEIKN 287
A E+ +
Sbjct: 140 AEAKEVNS 147
>ref|YP_696824.1| hypothetical protein CPF_2401 [Clostridium perfringens ATCC 13124]
Length = 267
Score = 33.9 bits (76), Expect = 3.0
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 63 NKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTV 122
+K + K ++ K + AT + + DK N + E KP +KV V
Sbjct: 47 SKFIWPEGKKTAEKERIEATSGENKETNEKDKENNKASKEDEKPKDNKVMAESVGGQEYV 106
Query: 123 TLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA 182
++ SN++ ++ V K Q + ++ ++ ++ G E +++++ N K
Sbjct: 107 MIQCGFYSNKENANNV-KAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNELN-EKG 164
Query: 183 VETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDS 242
V K + + V +EI G V + ++++D V KT ++++
Sbjct: 165 VSNTKGRFMIPKTDVCSNEIIEIVNGYVNIINKLKEDSVKGV----------KTTEFKEW 214
Query: 243 TSTLTISADSKKTKDLVFLTDG 264
++L +DS+ K L DG
Sbjct: 215 VNSLEEHSDSEYFKVFKELKDG 236
>ref|NP_563062.1| hypothetical protein CPE2146 [Clostridium perfringens str. 13]
Length = 267
Score = 33.9 bits (76), Expect = 3.0
Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 12/202 (5%)
Query: 63 NKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTV 122
+K + K ++ K + AT + + DK N + E KP +KV V
Sbjct: 47 SKFIWPEGKKTAEKERIEATSGENKETSEKDKENNKASKEDEKPKDNKVMAESVGGQEYV 106
Query: 123 TLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKA 182
++ SN++ ++ V K Q + ++ ++ ++ G E +++++ N K
Sbjct: 107 MIQCGFYSNKENANNV-KAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNELN-EKG 164
Query: 183 VETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDS 242
V K + + V +EI G V + ++++D V KT ++++
Sbjct: 165 VSNTKGRFMIPKTDVCSNEIIEIVNGYVNIINKLKEDSVKGV----------KTTEFKEW 214
Query: 243 TSTLTISADSKKTKDLVFLTDG 264
++L +DS+ K L DG
Sbjct: 215 VNSLEEHSDSEYFKVFKELKDG 236
>ref|NP_874510.1| Outer membrane efflux protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 541
Score = 33.9 bits (76), Expect = 3.0
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 28/176 (15%)
Query: 64 KIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS-------------- 109
KI + + N + KY R +DQ+ L+ + ++NN L G KP S
Sbjct: 310 KISLEESINYAIKY--RKELDQISLQISMNENNAKAALAGKKPTVSIYNTFDSSLSKGET 367
Query: 110 -----KVKLTVSADLNTVTLE----AFDASNQKISSKVTKKQGSITEETLKANKLDSKKL 160
+ ++++ NT+ L+ FD K K++ E + K + +K
Sbjct: 368 FVSSPRTNNSINSQNNTLGLQFNWPIFDGGYSKARYNAKKEKVKELEARIALKKTEIRKE 427
Query: 161 TRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREI 216
L S+ N+ +A+++ K S++L S++ KT + + + +R++
Sbjct: 428 VEEIFYKLNISK-ESIKNSYEAIQSSKESLRL--SILRLKTGITTQREVIVSQRDL 480
>ref|YP_665399.1| heat-shock chaperonin GroEL [Helicobacter acinonychis str. Sheeba]
Length = 546
Score = 33.9 bits (76), Expect = 3.0
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 18/104 (17%)
Query: 176 ADNATKAVETLKNSIKLEG--SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSN 233
A + T L SI EG ++ G +E+K G D + +N+ S+
Sbjct: 84 AGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGM---------DKAAEAIINELKKSS 134
Query: 234 KKTGKWEDSTSTLTISADSKKTKDLVFL-------TDGTITVQQ 270
KK G E+ T TISA+S + DG ITV++
Sbjct: 135 KKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEE 178
>ref|YP_664207.1| hypothetical protein Hac_0371 [Helicobacter acinonychis str.
Sheeba]
Length = 266
Score = 33.9 bits (76), Expect = 3.0
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 33/166 (19%)
Query: 20 GAESIGSQKEN-------DLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKN 72
G + IG+ K+ +N+E S ++S L V +D V K+++
Sbjct: 60 GMQKIGNTKDEKKDDGFESMNMEPSKQES------TLDKVADD-----------VKKQED 102
Query: 73 SSGKYDLRATIDQVELKGTSDKNNGSGTLE-----GSKPDKSKVKLTVSADLNTVTLEAF 127
++ ++ Q E+K D +E K + K VS VT +
Sbjct: 103 NAFNMPVQTNQAQTEMKALEDAKKELDFVEHTPMVAQKESQVAAKKEVSNKKPKVTPKNK 162
Query: 128 DASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI 173
+AS K + + KK+ + +E A+K SKK + N T + Y Q+
Sbjct: 163 EASKDK-AKHIAKKESKVKKE---AHKETSKKTKKVNATKMHYLQV 204
>ref|YP_378930.1| Parallel beta-helix repeat [Chlorobium chlorochromatii CaD3]
Length = 36805
Score = 33.9 bits (76), Expect = 3.0
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Query: 156 DSKKLTRSNGTTLEYSQITDADNATKAVET---LKNSIKLEGSLVVGKTTVEIKEGTVTL 212
++ +T T+E +++TDA + T +++T L + G +V+ T + +K G T
Sbjct: 30229 ETNDITIDTVDTIEVNRVTDAGSITNSIKTDNALSDIATGTGHVVIDATDITVKGGGDT- 30287
Query: 213 KREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFL------TDGTI 266
I G + LN +G+ T ++++A V L TDGT
Sbjct: 30288 -TGITTTGLGNILLNARSGNITAQAIINGGTGNISLNAVGTNLNGNVVLWNTTNATDGTA 30346
Query: 267 TVQQYNTAGTSLE---GSASEIKNLSEL 291
V T +++ G+A ++K+ S +
Sbjct: 30347 FVGVLQTDNATIDVRSGNAIDMKDGSTI 30374
Score = 33.1 bits (74), Expect = 5.2
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 24/161 (14%)
Query: 65 IFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTL 124
IF+ + + YD + + +NGS +L+ S K +TVS TV L
Sbjct: 31016 IFLQAKATQNATYD-------ITIGAAVTSSNGSISLDASNDIKQNSTITVSGGSGTVDL 31068
Query: 125 EA-FDASNQKISSKV-----------TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ 172
A D Q+ +S + T GSIT E + A + L +N T
Sbjct: 31069 LAGHDIVMQQTTSSISTSASNGNILLTATSGSITIENINAGS-GNVALYAANATN---GF 31124
Query: 173 ITDADNA-TKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
I D D+A V+ N + L+ +G T ++ TL
Sbjct: 31125 IYDGDDAGDSEVDITANGLILKAGNAIGSGTNHLETTVTTL 31165
>ref|YP_814610.1| Chromosome segregation ATPase [Lactobacillus gasseri ATCC 33323]
Length = 1186
Score = 33.9 bits (76), Expect = 3.0
Identities = 47/223 (21%), Positives = 87/223 (39%), Gaps = 24/223 (10%)
Query: 26 SQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNK-IFVSKEKNS-SGKYDLRATI 83
+ K +DL E ++K + ++ ++E ++ N K + K+ N K +L
Sbjct: 703 NHKLSDLQTELAAKNTELSSLNQ--KISEQTIKYENEEKEVKRLKQLNDLQQKAELEKKQ 760
Query: 84 DQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQG 143
++ EL G +K K + K+ D L FD + QK+ +K++
Sbjct: 761 EEAELTGRLEKEQTKKVQLEELAQKQRSKM----DQLKHDLHDFDEAYQKLQTKLSNLNS 816
Query: 144 SITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTV 203
+ K L++KK + S++ D D KA+ +N G++
Sbjct: 817 DLAVVKNKLENLNAKKAELAEQLVNTNSRLKDIDEKIKALALSQN----------GQSES 866
Query: 204 EIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTL 246
EI+E L + K K A N+ GK++ + L
Sbjct: 867 EIEEQVAKLSK------KKKQMQQALAEINQDLGKFDAQINNL 903
>ref|YP_813993.1| Adhesion exoprotein [Lactobacillus gasseri ATCC 33323]
Length = 2823
Score = 33.9 bits (76), Expect = 3.0
Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 29/235 (12%)
Query: 29 ENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL 88
EN NL ++ Q V E V L + K ++ Y A V
Sbjct: 762 ENGTNLSYTANDGDLVFNQTPGNVGEYQVELSAQGLTNIGKALGTNYAYPQIAA--DVTA 819
Query: 89 KGTSDKNNGSGT--LEGSKPDKSKVKLTVSADLN--------TVTLEAFDASNQKISSKV 138
KGT N G+ T L+GS + T+ + LN + T+ + D Q ++
Sbjct: 820 KGTFTVNRGAVTITLKGSDGKPYNAQQTLPSGLNLSKYGLDYSATVYSADGKAQMLNLTA 879
Query: 139 TKKQ--------GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSI 190
Q G+ E +A + ++LT +NG +++ T+AD KA S
Sbjct: 880 NDLQIIGNATNVGTYQVELSQAGQEKIEQLTGNNGANYKWTFKTNADYVVKAATA---SA 936
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTST 245
+L GS + +G+ E+ +G++ V L + + T +D T
Sbjct: 937 ELSGS------NQKTFDGSAVTTTEVNSNGQILVHLTYPGSNVQSTYTLQDGDYT 985
>ref|YP_342191.1| chemotaxis sensory transducer [Nitrosococcus oceani ATCC 19707]
Length = 537
Score = 33.9 bits (76), Expect = 3.0
Identities = 31/160 (19%), Positives = 65/160 (40%), Gaps = 15/160 (9%)
Query: 133 KISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITD--ADNATKAVETLKNSI 190
K+SS + Q ++ A++ ++++T E + + +DNATK+ E K S+
Sbjct: 266 KVSSSAQETQATVMH-LADASEHQAQQITTVGAAINEMAVSIEQVSDNATKSAEVAKQSV 324
Query: 191 KLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISA 250
++ +GT T+K IE ++ + +T+ K+ G+ +
Sbjct: 325 EIAS------------KGTETVKNAIEGMDNIREQIQETSKRIKRLGESSQQIGEIVELI 372
Query: 251 DSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIKNLSE 290
+ + + + I AG A E++ L+E
Sbjct: 373 NDIAEQTNILSLNAAIQAAMAGEAGRGFAVVADEVQRLAE 412
>ref|NP_111647.1| Chaperonin GroEL (HSP60 family) [Thermoplasma volcanium GSS1]
Length = 545
Score = 33.9 bits (76), Expect = 3.0
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 78 DLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKIS 135
+ R ID++ +K T D+ TL K+ LT + NT F D + ++
Sbjct: 133 EARKIIDEISVKSTDDE-----TLR-------KIALTALSGKNTGLSNTFLADLVVKAVN 180
Query: 136 SKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGS 195
+ ++ G I +T K+D K N T + D + V + + +
Sbjct: 181 AVAEERDGKIIVDTANI-KVDKKSGGSINDTQFISGIVVDKEK----VHSKMPDVVKDAK 235
Query: 196 LVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKK 235
+ + + +EIK+ + K +I K++ FLN + K+
Sbjct: 236 IALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETSTFKE 275
>ref|NP_266428.1| autolysin [Lactococcus lactis subsp. lactis Il1403]
Length = 439
Score = 33.9 bits (76), Expect = 3.0
Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 9/181 (4%)
Query: 84 DQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV---------SADLNTVTLEAFDASNQKI 134
D GTS+ + T + + S TV S + A+N K
Sbjct: 214 DGASSAGTSNSGGSTATNTNNNSNTSSTTYTVKSGDTLWGISQKYGISVAQIQSANNLKS 273
Query: 135 SSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEG 194
+ ++ +T + +N S S GTT + +T A A++ +K+ L G
Sbjct: 274 TVIYIGQKLVLTTSSSSSNTNSSTSSGNSAGTTTPTTSVTPAKPASQTTIKVKSGDTLWG 333
Query: 195 SLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
V KTT+ + L + G+ + S+ TG STS+ + S+ +
Sbjct: 334 LSVKYKTTIAQLKSWNHLNSDTIFIGQNLIVSQSAGSSSSSTGSSSASTSSTSNSSAASN 393
Query: 255 T 255
T
Sbjct: 394 T 394
>ref|NP_349685.1| TPR-repeat-containing protein; Cell-adhesion domain [Clostridium
acetobutylicum ATCC 824]
Length = 694
Score = 33.9 bits (76), Expect = 3.0
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 13/152 (8%)
Query: 128 DASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYS-QITDADNATKAVETL 186
D Q + + S+T +T K N++ + NG+T +Y + T ++ TK
Sbjct: 333 DHKGQDVDAPSKPVINSVTNDTFK-NQISLNYSSTDNGSTYDYYVEATGKNDGTKVDSDT 391
Query: 187 KNSIKLEG----SLVVGKTTVEIKEGTVT-------LKREIEKDGKVKVFLNDTAGSNKK 235
K G S+VV + + I T+T L + D V + D AG+ +
Sbjct: 392 KTGTVTTGIAGYSIVVDQNSDTIPSNTITTTSTNYTLNNSYKNDFYVHIAAIDKAGNISE 451
Query: 236 TGKWEDSTSTLTISADSKKTKDLVFLTDGTIT 267
+ S T A +K T +L + T+T
Sbjct: 452 VTHQKVSVDNATNIALNKTTDNLTVGANDTLT 483
>ref|NP_968343.1| cell wall surface anchor family protein [Bdellovibrio bacteriovorus
HD100]
Length = 2576
Score = 33.9 bits (76), Expect = 3.0
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 21/207 (10%)
Query: 49 LPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVEL--KGTSDKNNGSGTLEGSKP 106
+P++T VS GN S +S+ YD+ A + L + TS N S SK
Sbjct: 1186 IPSITAGKVSDPAGNTNNASTTTDSTVTYDITAPANATSLAWQQTSPTNTTSLVASWSKS 1245
Query: 107 DKS-----KVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLT 161
+ KV+ A +T T A++ +S T G T T + LD+
Sbjct: 1246 TSTDLASQKVRFYTGASCDTYTGTENAATSSATTSNFTGVNG--TTYTYQVISLDA---- 1299
Query: 162 RSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGK 221
N T S D V T+ S K G+ VG ++ + +T + G
Sbjct: 1300 AGNSITSVCSSAIVIDTTVPTVTTV-TSNKANGAYTVG----DVIDVRITFSENVTVTGT 1354
Query: 222 VKVFLNDTAGSNKKTGKWEDSTSTLTI 248
+ LN T ++ + T T T+
Sbjct: 1355 PLIALNTTPA---RSASYASGTGTNTL 1378
>ref|YP_515892.1| adenylate cyclase [Chlamydophila felis Fe/C-56]
Length = 841
Score = 33.9 bits (76), Expect = 3.0
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 18 QKGAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTED 55
+K A+ GS KE D + EDS +KS + QD VTE+
Sbjct: 306 EKEAKEEGSSKEQDTSEEDSVEKSEEEEDQDSDKVTEE 343
>ref|NP_927898.1| hypothetical protein plu0548 [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 4582
Score = 33.5 bits (75), Expect = 4.0
Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 53 TEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVK 112
T D +++ S +GK + T + + K NG+ + + D SK K
Sbjct: 575 TADKITIKTDTLSHQSGVMQQNGKDKMSLTAKTLNNQNGEIKGNGNLKINATTLDNSKGK 634
Query: 113 LTVSADLNTV----TLEAFDASNQKISSKVTKKQGSITEE-TLKANKLDSK----KLTRS 163
+ + + +E D + + TK Q + +L A ++DS+ K T +
Sbjct: 635 IVATGGSTELIIEKNIENVDGRIETKTELTTKSQALNNHQGSLLAQRIDSQTKGHKFTNT 694
Query: 164 NGTTLEYSQIT----DADNATKAVETLKNSI-KLEGSLVVGKTTV------EIKEGTVTL 212
G + ++T + DN + +++ + I G + EIK+GT+
Sbjct: 695 AGQVIAQEKLTLNSGELDNTSGLLQSDSDMIVNTHGQKLTNTKDTKNGDEKEIKKGTILS 754
Query: 213 KREIE-KDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQY 271
K +E + G + N+TAG GK T++A + V TDG + QQ
Sbjct: 755 KGNLELRTGDI----NNTAGIISAKGK-------TTLNAGN------VDNTDGQLLSQQM 797
Query: 272 NTAGT-SLEGSASEIKNLSEL 291
T +L+ + +I++ S L
Sbjct: 798 AELTTQALDNTRGQIQSESSL 818
>ref|YP_880496.1| adenylate and Guanylate cyclase catalytic domain protein
[Mycobacterium avium 104]
Length = 272
Score = 33.5 bits (75), Expect = 4.0
Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 12/151 (7%)
Query: 158 KKLTRSNGTTLEYSQITDADN--------ATKAVETLKNSIKLEGSLVVGKTTVEIKEGT 209
++L RS E Q TDA N A K V N ++ EG ++++E
Sbjct: 28 RRLVRSRAELDELRQRTDARNWLLAGGREAVKTVWNTANLVRKEGFGAAVRSSIEELADW 87
Query: 210 VTLKR----EIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGT 265
++R + DG+V + D S + D IS+ K DLV G
Sbjct: 88 AEVERPDLARVTPDGRVVILFTDIEESTALNERIGDRAWVKLISSHDKLVSDLVRRQSGH 147
Query: 266 ITVQQYNTAGTSLEGSASEIKNLSELKNALK 296
+ Q + + ++ EL+ AL+
Sbjct: 148 VVKSQGDGFMVAFARPEQAVRCGIELQRALR 178
>ref|NP_870028.1| hypothetical protein-signal peptide prediction [Rhodopirellula
baltica SH 1]
Length = 669
Score = 33.5 bits (75), Expect = 4.0
Identities = 47/263 (17%), Positives = 103/263 (39%), Gaps = 9/263 (3%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRAT 82
S S + + S S + + + S S +G+ SK +SS ++
Sbjct: 70 SSSSSSSSGSSSSSSGSSSSSSGSPSSSSSSGSSSSSSSGSSSSSSKSSSSSDSSSNSSS 129
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
D + +S ++ S + + S S V + S+D + ++ D+S V+
Sbjct: 130 SDSSDSSHSSSASSSSDSSDSSTSSSSSVSSSQSSD----SSDSSDSSTSTSLPSVSSSS 185
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTT 202
S + + DS ++S+ ++ S +D+ ++T ++ ++ S +GS ++
Sbjct: 186 SSDGSSSSSSGSSDSSSNSQSSDSS--NSDSSDSSDST-SLPSISGSSSSDGSSASSDSS 242
Query: 203 VEIKEGTVTLKREIE-KDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLVF- 260
+ E D + L +GS+ G S+ + S++S+ +
Sbjct: 243 DSSSNSQSSDSSNSESSDSSDSISLPSISGSSSSAGSSSASSDSSNSSSNSQSSDSSTSE 302
Query: 261 LTDGTITVQQYNTAGTSLEGSAS 283
D + +V + +G+S S S
Sbjct: 303 SNDSSASVSLPSVSGSSSSASDS 325
>ref|NP_994376.1| hemolysin [Yersinia pestis biovar Microtus str. 91001]
Length = 1654
Score = 33.5 bits (75), Expect = 4.0
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 53/281 (18%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G + I DL L+ + S A D V L G K+ ++ S K D+
Sbjct: 1166 GKQGIELNAGKDLTLQGTEFGSKNAATGD--------VQLTAGGKVDFQAAQSQSSKQDM 1217
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
T G S N+ S +G+K + + A+ N + ++Q +
Sbjct: 1218 --TWSASVKAGKSKSNSTSENDDGTKTHTNNKGFSAGAEANVKNTDETSLTHQ---GGII 1272
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
G++T +KA+ D + + N + I +ADN +E+ ++
Sbjct: 1273 NSNGAVT---IKADGKDQQAIHLQNTNIISQETILNADNGGIVMESAQD----------- 1318
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS-KKTKDL 258
+E + + V LN GS K T K +D + DS KK +
Sbjct: 1319 --------------KEHKNNWNVNTNLN---GSQKNTIKSDDQG---VVDKDSAKKIHNA 1358
Query: 259 VFLTDGTI----TVQQYNTAGTSLEGSASEIKNLSELKNAL 295
DG + +V Q NT S + + + KN +EL A+
Sbjct: 1359 AIKLDGGVDKLDSVTQQNTHINSDKVTLNSAKN-TELAGAV 1398
>ref|NP_784891.1| cell surface protein precursor [Lactobacillus plantarum WCFS1]
Length = 1010
Score = 33.5 bits (75), Expect = 4.0
Identities = 43/196 (21%), Positives = 84/196 (42%), Gaps = 15/196 (7%)
Query: 51 AVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSK 110
A ++++ S+ N ++ + ++ SS + T + S K+ T SK + S
Sbjct: 104 ATSQENSSVQNTSQATSTSKQESSSTKNTSQTTSTSNQEANSAKSINQ-TTRTSKQESSS 162
Query: 111 VKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEY 170
K T S +T EA A + +++ + ++ S + T + S+K+ +T
Sbjct: 163 TKNT-SQTTSTSNQEANSAKSINQTTRTSNQESSSAKNTSQTTSTSSRKIN----STKSQ 217
Query: 171 SQITDADNATKAVETLKNSIKLEGSLV-VGKTTV--EIKEGTVTLKRE-----IEKDGKV 222
+Q KAV S+K + V +T+ +++ + E ++KD +
Sbjct: 218 AQSLTITTTGKAVRATSTSVKKYSTKTKVSYSTLLQQLRTSKALISDEAALTHVDKDNFL 277
Query: 223 KVF-LNDTAGSNKKTG 237
K F LN +A + KTG
Sbjct: 278 KYFSLNGSATYDAKTG 293
>ref|NP_407172.1| hemolysin [Yersinia pestis CO92]
Length = 1635
Score = 33.5 bits (75), Expect = 4.0
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 53/281 (18%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G + I DL L+ + S A D V L G K+ ++ S K D+
Sbjct: 1147 GKQGIELNAGKDLTLQGTEFGSKNAATGD--------VQLTAGGKVDFQAAQSQSSKQDM 1198
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
T G S N+ S +G+K + + A+ N + ++Q +
Sbjct: 1199 --TWSASVKAGKSKSNSTSENDDGTKTHTNNKGFSAGAEANVKNTDETSLTHQ---GGII 1253
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
G++T +KA+ D + + N + I +ADN +E+ ++
Sbjct: 1254 NSNGAVT---IKADGKDQQAIHLQNTNIISQETILNADNGGIVMESAQD----------- 1299
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS-KKTKDL 258
+E + + V LN GS K T K +D + DS KK +
Sbjct: 1300 --------------KEHKNNWNVNTNLN---GSQKNTIKSDDQG---VVDKDSAKKIHNA 1339
Query: 259 VFLTDGTI----TVQQYNTAGTSLEGSASEIKNLSELKNAL 295
DG + +V Q NT S + + + KN +EL A+
Sbjct: 1340 AIKLDGGVDKLDSVTQQNTHINSDKVTLNSAKN-TELAGAV 1379
>ref|YP_719270.1| possible large adhesin [Haemophilus somnus 129PT]
Length = 2906
Score = 33.5 bits (75), Expect = 4.0
Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 17/148 (11%)
Query: 97 GSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLD 156
G G + +K+ ++ D N + ++ D S + K G K + LD
Sbjct: 2685 GEGEFNSDRTATGNIKVEMAQDGNGLEVKLSDQLKNMTSFETRKVDG-------KQSALD 2737
Query: 157 SKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEG---SLVVG-KTTVEIKEGTVTL 212
S L SN T E SQ+ ++N E K + L+G +L VG K + I + L
Sbjct: 2738 SNGLKVSNSKTEERSQL--SENRLAFYENDKLGLNLDGKSRALKVGEKAIISINDKNEAL 2795
Query: 213 KREIEKDGKVKVFLN----DTAGSNKKT 236
++ K N DT + +T
Sbjct: 2796 VEDLNASSSSKAIANKNYVDTKNNELRT 2823
>ref|NP_697114.1| outer membrane protein [Brucella suis 1330]
Length = 740
Score = 33.5 bits (75), Expect = 4.0
Identities = 64/282 (22%), Positives = 116/282 (41%), Gaps = 38/282 (13%)
Query: 25 GSQKENDLNL-EDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATI 83
GS + L++ D+ K+S N V++DS NG ++F E+ +SG +
Sbjct: 205 GSNPASVLSIGNDTLKRSITNVGAG--RVSKDSTDAVNGRQLFAVSEQAASGWSLTVNGM 262
Query: 84 D--QVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEA----FDASNQKISSK 137
D +V T D +N G L SK K V +++DL +L A D + I+
Sbjct: 263 DKSRVGPGDTVDLSNSDGNLVLSKKGKD-VTFNLASDLKVTSLVAGNTFLDTNGLVITGG 321
Query: 138 VTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLV 197
+ I LK + + +T ++ + SQ+ + + +GS++
Sbjct: 322 PSMTVSGIDAGQLKISHVADGAVTVTSTDAVNGSQLHRVAHTIAEHLGGDAHVNADGSVI 381
Query: 198 VGKTTVEIKE--------GTV--------TLKREIEKDGKVKVFLNDTAGSNKKTGKWED 241
+ TV+ K G V + +IE G +K F ++ G++ +
Sbjct: 382 GPQYTVQKKRYKTIYDAFGGVDENLANINDILHDIESGGGIKYFHANSIGADSRA----L 437
Query: 242 STSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSAS 283
T+++ + +DS V +G+I+V N A S GS +
Sbjct: 438 GTNSIAVGSDS------VASGEGSISVG--NGAQASAHGSVA 471
>ref|NP_615473.1| surface antigen gene [Methanosarcina acetivorans C2A]
Length = 482
Score = 33.5 bits (75), Expect = 4.0
Identities = 57/233 (24%), Positives = 87/233 (37%), Gaps = 26/233 (11%)
Query: 83 IDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQ 142
ID K T++ + G EG K + D NTV++ D N I++
Sbjct: 206 IDAATNKVTANISVGDSPYEGVVTPDGKKVYVPNYDSNTVSVINTDMDNV-IATVPVGNS 264
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE---GSLVVG 199
++ T NK+ +N T TD +T V T + I + +G
Sbjct: 265 PNLVAVTSDGNKV----YVANNNTVSVIDTATDNVISTVPVGTYSSKIVVSPDGNKFYLG 320
Query: 200 K------TTVEIKEGTVT---------LKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTS 244
T + + TVT + I DGK KV++ + N T
Sbjct: 321 NFYNKSVTVINTETNTVTATVPVGEWPMGIAITPDGK-KVYVANAESDNVSVIDTATDTV 379
Query: 245 TLTISADSKKTKDLVF-LTDGTITVQQYNTAGTSLEGSASEIKNL-SELKNAL 295
T T++A T ++ LTD +T Q T E +E NL SE +NA+
Sbjct: 380 TATVNAGVYPTNVVIVPLTDSDMTAQSTGTNSNVTEDVGTEKTNLSSEGQNAV 432
>ref|NP_667366.1| hemolysin precursor [Yersinia pestis KIM]
Length = 1654
Score = 33.5 bits (75), Expect = 4.0
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 53/281 (18%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G + I DL L+ + S A D V L G K+ ++ S K D+
Sbjct: 1166 GKQGIELNAGKDLTLQGTEFGSKNAATGD--------VQLTAGGKVDFQAAQSQSSKQDM 1217
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
T G S N+ S +G+K + + A+ N + ++Q +
Sbjct: 1218 --TWSASVKAGKSKSNSTSENDDGTKTHTNNKGFSAGAEANVKNTDETSLTHQ---GGII 1272
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
G++T +KA+ D + + N + I +ADN +E+ ++
Sbjct: 1273 NSNGAVT---IKADGKDQQAIHLQNTNIISQETILNADNGGIVMESAQD----------- 1318
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS-KKTKDL 258
+E + + V LN GS K T K +D + DS KK +
Sbjct: 1319 --------------KEHKNNWNVNTNLN---GSQKNTIKSDDQG---VVDKDSAKKIHNA 1358
Query: 259 VFLTDGTI----TVQQYNTAGTSLEGSASEIKNLSELKNAL 295
DG + +V Q NT S + + + KN +EL A+
Sbjct: 1359 AIKLDGGVDKLDSVTQQNTHINSDKVTLNSAKN-TELAGAV 1398
>ref|NP_765958.1| glycerol ester hydrolase [Staphylococcus epidermidis ATCC 12228]
Length = 681
Score = 33.5 bits (75), Expect = 4.0
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 37 SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR-----ATIDQVELKGT 91
S + ++Q K++ +V +D N N+ V+ + N D++ + ++ +
Sbjct: 104 SDETANQPKKEEGSSVKQDVQPSKNVNQQDVATQSNERENNDIKDEGQTSKTSNQHIQSS 163
Query: 92 SDKNNGSGTLEG--SKPDKSKVKLTVSADLNTVTLEAF---DASNQKISSKVTKKQGSIT 146
+ N +GT + + D+ VKL ++ +T ++ D+S Q K TK+Q T
Sbjct: 164 NSHNQSTGTKDSYSEEIDQPLVKLQKPSNDSTYQTQSKTKQDSSKQLPQEKTTKRQIQTT 223
Query: 147 EETLKANKLDSKK 159
E + K+DSKK
Sbjct: 224 ENE-QTTKVDSKK 235
>ref|YP_187618.1| lipase, putative [Staphylococcus epidermidis RP62A]
Length = 681
Score = 33.5 bits (75), Expect = 4.0
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 37 SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLR-----ATIDQVELKGT 91
S + ++Q K++ +V +D N N+ V+ + N D++ + ++ +
Sbjct: 104 SDETANQPKKEEGSSVKQDVQPSKNVNQQDVATQSNERENNDIKDEGQTSKTSNQHIQSS 163
Query: 92 SDKNNGSGTLEG--SKPDKSKVKLTVSADLNTVTLEAF---DASNQKISSKVTKKQGSIT 146
+ N +GT + + D+ VKL ++ +T ++ D+S Q K TK+Q T
Sbjct: 164 NSHNQSTGTKDSYSEEIDQPLVKLQKPSNDSTYQTQSKTKQDSSKQLPQEKTTKRQIQTT 223
Query: 147 EETLKANKLDSKK 159
E + K+DSKK
Sbjct: 224 ENE-QTTKVDSKK 235
>ref|NP_345623.1| immunoglobulin A1 protease [Streptococcus pneumoniae TIGR4]
Length = 2004
Score = 33.5 bits (75), Expect = 4.0
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 15/164 (9%)
Query: 30 NDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELK 89
N+ +E +S + + Q +S + N N VS K S K + + +Q E
Sbjct: 598 NEGTVEGTSNQETEKPVQPAEETQTNSGKIANENTGEVSN-KPSDSKPPVEES-NQPEKN 655
Query: 90 GTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET 149
GT+ K SG T S + T + S + +S++ + EE
Sbjct: 656 GTATKPENSGN-------------TTSENGQTEPEPSNGNSTEDVSTESNTSNSNGNEEI 702
Query: 150 LKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE 193
+ N+LD K TLE ++D + + + T K I LE
Sbjct: 703 KQENELDPDKKVEEPEKTLELRNVSDLELYSLSNGTYKQHISLE 746
Score = 33.1 bits (74), Expect = 5.2
Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 26/210 (12%)
Query: 18 QKGAESIGSQKENDLNLED-SSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGK 76
Q+ + +E+ N E S S +N + ++ + S+ NK E N S
Sbjct: 528 QEAENPVQPAEESTTNSEKVSPDTSSKNTGEVSSNPSDSTTSVGESNK----PEHNDSKN 583
Query: 77 YDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISS 136
+ T+++V + N GT+EG+ +++ + + + T + + + + ++S+
Sbjct: 584 ENSEKTVEEVPV------NPNEGTVEGTSNQETEKPVQPAEETQTNSGKIANENTGEVSN 637
Query: 137 KVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI---TDADNATKAVETLKNSIKLE 193
K + + + E + K S TT E Q N+T+ V T N+
Sbjct: 638 KPSDSKPPVEESNQPEKNGTATKPENSGNTTSENGQTEPEPSNGNSTEDVSTESNTSNSN 697
Query: 194 GSLVVGKTTVEIKEGTVTLKREIEKDGKVK 223
G+ EIK+ + E++ D KV+
Sbjct: 698 GN-------EEIKQ-----ENELDPDKKVE 715
>ref|NP_628023.1| dehydrogenase [Streptomyces coelicolor A3(2)]
Length = 563
Score = 33.5 bits (75), Expect = 4.0
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 18/128 (14%)
Query: 110 KVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLE 169
K +L +A L V L + + +N + V + + KLD K T E
Sbjct: 404 KARLEAAAGLGEVALASREVTNPEFPDAVVRTPVIV--------KLDGAKPEDEAAYTSE 455
Query: 170 ----YSQITDADNATKAVETLKNSIKLEGSLVVGKTTV--EIKEGTVTLKREIEKDGKVK 223
S D+A AVE L+ S++ +G++ VG T E++E +E+ D +
Sbjct: 456 CFGPVSFAVAVDSADHAVELLRRSVREKGAMTVGAYTTDPEVEEAV----QEVCLDEAAQ 511
Query: 224 VFLNDTAG 231
+ LN T G
Sbjct: 512 LSLNLTGG 519
>ref|YP_877981.1| flagellar hook assembly protein FlgD [Clostridium novyi NT]
Length = 274
Score = 33.5 bits (75), Expect = 4.0
Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 32/226 (14%)
Query: 58 SLFNGNKIF--VSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV 115
S NGN+ F ++K+KN K +L +++VE + K +G + DK+ +
Sbjct: 14 SQLNGNRTFQSINKDKNKDSKNNLDGKVEKVEHFSGATKRGTKIVKKGQEMDKNAFLKIL 73
Query: 116 SADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSN---GTTLEYSQ 172
+A+L D N K S++ + + AN + + G T+ S
Sbjct: 74 TAELTNQ-----DPMNAKDSTQYISQLAQFSSLEQMANLNSTMSFNSAGNMVGKTVALSS 128
Query: 173 ITD--------ADNATKAVETL---KNSIKLEGSLVVGKTTVE--IKEGTVTLKREIEKD 219
D N K + + N K +G+ ++G+ E K+ + L EKD
Sbjct: 129 YDDYGRQYGGTVTNVRKDGDDIILSVNVAKYKGNELIGREDKEFNFKDVSDVLSVPDEKD 188
Query: 220 GKVKV------FLNDT---AGSNKKTGKWEDSTSTLTISADSKKTK 256
+ +LND G++ GK + + D KK K
Sbjct: 189 HMISYLIDHMNYLNDNLSFMGASSLIGKKVEIEPKTSPEKDDKKEK 234
>ref|YP_645952.1| hemolysin [Yersinia pestis Nepal516]
Length = 1635
Score = 33.5 bits (75), Expect = 4.0
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 53/281 (18%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G + I DL L+ + S A D V L G K+ ++ S K D+
Sbjct: 1147 GKQGIELNAGKDLTLQGTEFGSKNAATGD--------VQLTAGGKVDFQAAQSQSSKQDM 1198
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
T G S N+ S +G+K + + A+ N + ++Q +
Sbjct: 1199 --TWSASVKAGKSKSNSTSENDDGTKTHTNNKGFSAGAEANVKNTDETSLTHQ---GGII 1253
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
G++T +KA+ D + + N + I +ADN +E+ ++
Sbjct: 1254 NSNGAVT---IKADGKDQQAIHLQNTNIISQETILNADNGGIVMESAQD----------- 1299
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS-KKTKDL 258
+E + + V LN GS K T K +D + DS KK +
Sbjct: 1300 --------------KEHKNNWNVNTNLN---GSQKNTIKSDDQG---VVDKDSAKKIHNA 1339
Query: 259 VFLTDGTI----TVQQYNTAGTSLEGSASEIKNLSELKNAL 295
DG + +V Q NT S + + + KN +EL A+
Sbjct: 1340 AIKLDGGVDKLDSVTQQNTHINSDKVTLNSAKN-TELAGAV 1379
>ref|YP_649936.1| hemolysin [Yersinia pestis Antiqua]
Length = 1635
Score = 33.5 bits (75), Expect = 4.0
Identities = 62/281 (22%), Positives = 104/281 (37%), Gaps = 53/281 (18%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDL 79
G + I DL L+ + S A D V L G K+ ++ S K D+
Sbjct: 1147 GKQGIELNAGKDLTLQGTEFGSKNAATGD--------VQLTAGGKVDFQAAQSQSSKQDM 1198
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVT 139
T G S N+ S +G+K + + A+ N + ++Q +
Sbjct: 1199 --TWSASVKAGKSKSNSTSENDDGTKTHTNNKGFSAGAEANVKNTDETSLTHQ---GGII 1253
Query: 140 KKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVG 199
G++T +KA+ D + + N + I +ADN +E+ ++
Sbjct: 1254 NSNGAVT---IKADGKDQQAIHLQNTNIISQETILNADNGGIVMESAQD----------- 1299
Query: 200 KTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADS-KKTKDL 258
+E + + V LN GS K T K +D + DS KK +
Sbjct: 1300 --------------KEHKNNWNVNTNLN---GSQKNTIKSDDQG---VVDKDSAKKIHNA 1339
Query: 259 VFLTDGTI----TVQQYNTAGTSLEGSASEIKNLSELKNAL 295
DG + +V Q NT S + + + KN +EL A+
Sbjct: 1340 AIKLDGGVDKLDSVTQQNTHINSDKVTLNSAKN-TELAGAV 1379
>ref|YP_437932.1| hypothetical protein HCH_06889 [Hahella chejuensis KCTC 2396]
Length = 540
Score = 33.5 bits (75), Expect = 4.0
Identities = 52/220 (23%), Positives = 86/220 (39%), Gaps = 24/220 (10%)
Query: 64 KIFVSKEKNSSGKYDL-------RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVS 116
KI + E + G L A + G SD ++G G EGS K+K +T
Sbjct: 129 KILIGSESGTKGSLVLDGMETGRSAFLGMKYYVGFSDTDSGGG--EGSLELKNKTHITGY 186
Query: 117 ADLNTVTLEAFDASNQKISSKVTKKQGSITEE-----TLKANKLDSKKLTRSNGTTLEYS 171
+ L D S ++ V + G + T + +L+ K L + ++L
Sbjct: 187 STHVDGRLAFNDQSTMSLNEDVQLRNGVLEINSGSWLTAEEAELNGKVLMDGDNSSLSAH 246
Query: 172 QITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTA- 230
+ + T ++ T + E GK ++ K ++ + + G+ + N
Sbjct: 247 YMNLTEEGTISI-TNGARVSAEFGSYYGKVVIDGKNSSMDMW-DTAYFGEDLIIQNGATM 304
Query: 231 -GSNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQ 269
GS K GK +LTI A SK + F DGT TV+
Sbjct: 305 TGSYIKIGK------SLTIEAGSKFDEGSYFFIDGTTTVK 338
>ref|YP_423439.1| Methyl-accepting chemotaxis protein [Magnetospirillum magneticum
AMB-1]
Length = 762
Score = 33.5 bits (75), Expect = 4.0
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 11/203 (5%)
Query: 40 KSHQNAKQDLP------AVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQV-ELKGTS 92
+S Q K+DL A E+ +KI + + + + RA +D++ E+
Sbjct: 345 RSVQRFKEDLTEVERLRAAQEEERRKAERDKIAALQGMAETVERETRAAVDRIAEMTRRM 404
Query: 93 DKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKA 152
N G L S + + +A + A+ +++S+ + + I + A
Sbjct: 405 ADNAGGMALSASAVGDNSQSVAAAATQALANAQTVAAAAEELSASIHE----IANQVGTA 460
Query: 153 NKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTL 212
+ + S + SN + SQ+++ N V L N I + +L+ T+E
Sbjct: 461 STVTSTAVEASNQASRTISQLSETVNRIGEVANLINDIASQTNLLALNATIEAARAGEAG 520
Query: 213 KREIEKDGKVKVFLNDTAGSNKK 235
K +VK N TA + ++
Sbjct: 521 KGFAVVANEVKNLANQTAKATEE 543
>ref|YP_814253.1| Adhesion Exoprotein [Lactobacillus gasseri ATCC 33323]
Length = 2457
Score = 33.5 bits (75), Expect = 4.0
Identities = 58/216 (26%), Positives = 83/216 (38%), Gaps = 18/216 (8%)
Query: 60 FNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADL 119
FNG+KI + KN G Y+LR T D + +D NNG+ + T +AD
Sbjct: 699 FNGHKIAKDQAKNV-GNYNLRLTDDFINKVKAADGNNGNNYEWAYGTNTPTGSDTYTADY 757
Query: 120 NTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNA 179
V +A K+S +K T NK +K+T + T Y Q + +
Sbjct: 758 --VIYQA--TGKAKLSGNNSKLYDGNAVTTDDVNK--GRKIT-IDLTLPVYKQADEPGDE 810
Query: 180 TKAVET--LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLND----TAGSN 233
+ + T L +G T K G+ T+ + KD K+ L D AG
Sbjct: 811 PQLLGTVDLGKYTLQDGDYTWANGTAPTKGGSYTI--NLNKD-KILAHLQDRLVALAGKG 867
Query: 234 KKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQ 269
S S +TISAD F + T T Q
Sbjct: 868 TDPDDSTKSLSNVTISADD-MAGQATFAIETTTTYQ 902
>ref|YP_813996.1| hypothetical protein LGAS_0146 [Lactobacillus gasseri ATCC 33323]
Length = 967
Score = 33.5 bits (75), Expect = 4.0
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 18/183 (9%)
Query: 23 SIGSQKENDLNLEDSSKKSHQNAKQDLPAVTEDSVSL---FNGNKIFVSKEKNSSGKYDL 79
S+ S K+ +LE S+K + +A+ L A D ++ ++ ++ + + GK D
Sbjct: 693 SLESLKQTLSSLE-SAKANLASAQAALTAANNDVLTADKDVKAQELILASLEEAKGKSDA 751
Query: 80 RATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTV---SADLNTVTLEAFDASNQKISS 136
+ + +LK K + E SK +K KL A+ NT ++ N + +
Sbjct: 752 QVASAEKDLK----KAEAALANEQSKLADAKAKLAELNKKANNNTGKSDSKPEINNQKPA 807
Query: 137 KVTKKQGSITEETLKA-------NKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNS 189
K K GS + T K NK DSKK S + + N TK +S
Sbjct: 808 KPATKPGSESANTEKPEPDFSGNNKSDSKKEQNSTDNVKSDVKSENKSNKTKEESKSSSS 867
Query: 190 IKL 192
+K+
Sbjct: 868 VKI 870
>ref|NP_326482.1| hypothetical protein MYPU_6510 [Mycoplasma pulmonis UAB CTIP]
Length = 1272
Score = 33.5 bits (75), Expect = 4.0
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 40 KSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSG 99
K + KQ LP+ ++S + K+ VS +KN + L + K S+ NN G
Sbjct: 460 KENSQLKQKLPSQFKESDLNLSNLKVLVSDDKNKFSELSLPQGY-SISFKLASNSNNDEG 518
Query: 100 TL--------EGSKPDKSKVKLT-VSADLNTVTLEAF--DASNQK--ISSKVTKKQGSIT 146
TL +G + ++KLT + + ++ F D SN+K ++S V I
Sbjct: 519 TLDVKVIVQKQGKEVKTKELKLTNLLTEFESLKESDFQLDFSNKKDRLASSVVMNDKIIK 578
Query: 147 EETLKANK 154
E + NK
Sbjct: 579 ESLVVKNK 586
>ref|YP_566590.1| thermosome subunit, group II chaperonin [Methanococcoides burtonii
DSM 6242]
Length = 500
Score = 33.5 bits (75), Expect = 4.0
Identities = 29/126 (23%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 106 PDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEET---LKANKLDSKKLTR 162
PD + ++ +T + +A +K+S+ K SI EE LK N L++ K+ +
Sbjct: 98 PDDEAALIKIAG--TAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEK 155
Query: 163 SNGTTLEYSQITDADNATKAVETLKNSIKLEGS-LVVGKTTVEIKEGTVTLKREIEKDGK 221
G +++ S++ D K K+E + +++ VE ++ V + +I G+
Sbjct: 156 RAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQ 215
Query: 222 VKVFLN 227
+++FL+
Sbjct: 216 MQLFLD 221
>ref|NP_946656.1| possible flagellar hook length determination protein
[Rhodopseudomonas palustris CGA009]
Length = 530
Score = 33.5 bits (75), Expect = 4.0
Identities = 52/235 (22%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 66 FVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKS-KVKLTVSADLNTVTL 124
F + +++ YD ++ + + + +S ++ GT S+ D+S + S D + +
Sbjct: 32 FAALVDSNTAAYDKASSAPKPDTRSSSSASDDRGTSRSSRTDRSDATDRSRSRDTSDDSR 91
Query: 125 EAFDASNQ---KISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDAD---- 177
A +A++ K +K T G T K++K D+ K + + + + ++ TDA
Sbjct: 92 RADNAASSDPAKPDAKTTDTAGGDKTGTTKSDKADNTKSAKDDKSGV--AKDTDAKGADQ 149
Query: 178 ------NATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAG 231
+AT V N+ L + V T EG D AG
Sbjct: 150 ADSKDASATPPVTITPNAAALIAAQVTTTATAPNAEG-------------------DAAG 190
Query: 232 SNKKTGKWEDSTSTLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEIK 286
S T + + L AD+ T T T T Q TA + G A++ K
Sbjct: 191 SANGTPLAIAAAAALKAKADAGTT------TTQTATADQTGTAEATQTGVAADPK 239
>ref|NP_964159.1| hypothetical protein LJ0143 [Lactobacillus johnsonii NCC 533]
Length = 982
Score = 33.5 bits (75), Expect = 4.0
Identities = 53/257 (20%), Positives = 95/257 (36%), Gaps = 54/257 (21%)
Query: 19 KGAESIGSQKENDLNLEDSSKKSHQ--------------NAKQDLPAV------TEDSVS 58
K +++ +ND+ +D++ KS Q NA+ +L A D V+
Sbjct: 667 KASQAKVDAAQNDVQAKDNNLKSVQAALDSLNQALNNLENAQSNLSAAQTAFNKANDDVT 726
Query: 59 LFN----GNKIFVSKEKNSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLT 114
N ++ + K S K D + T ELK K E SK + +K +L
Sbjct: 727 AANKAVKAQQLILDTLKESKSKADAQVTNASEELK----KAEAELAAEQSKLEDAKARL- 781
Query: 115 VSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQI- 173
DA N+K + K+ + NK D+ + + + T E S +
Sbjct: 782 -------------DAFNKKETENSHKEASNAENPVTPTNKPDTSHVVKPSDKTDEDSTVK 828
Query: 174 -TDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGS 232
TD ++ T +S +TT E V ++++ K + N+ +
Sbjct: 829 PTDKPDSHSEASTTNSS----------ETTTTATESDVKDTDTVKENAKADLKTNNKSEE 878
Query: 233 NKKTGKWEDSTSTLTIS 249
T K D++ + +S
Sbjct: 879 KSSTVKIIDNSDSSAVS 895
>ref|NP_866735.1| hypothetical protein RB5501 [Rhodopirellula baltica SH 1]
Length = 432
Score = 33.1 bits (74), Expect = 5.2
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 81 ATIDQVELKGTSDKNNGSG--TLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKV 138
A+ + K T+DK++ + + G+ SK + +A +T T + + K S+
Sbjct: 312 ASSKSTKKKATTDKSSSTAKSSTSGTAKKSSKTSASKTASKSTETTRSAGEKSSKTSTTK 371
Query: 139 ---TKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNA 179
KK GS + + A + KK + TT S TD+ ++
Sbjct: 372 KAPAKKSGSNAKPSSSAKEAAPKKSAKKKSTTTSKSASTDSSSS 415
>ref|YP_825901.1| Ig domain protein, group 2 domain protein [Solibacter usitatus
Ellin6076]
Length = 1672
Score = 33.1 bits (74), Expect = 5.2
Identities = 45/215 (20%), Positives = 82/215 (38%), Gaps = 16/215 (7%)
Query: 72 NSSGKYDLRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASN 131
+S+G Y A+I ++ + + T S +TVS TL+ A +
Sbjct: 231 SSTGFYTAPASISIAQIVTVAATSAADPTKSASASITLAPTVTVSVTPTATTLKP--AQS 288
Query: 132 QKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEY---SQITDADNATKAVETLKN 188
Q++++ VT + ++ S S+G T Y S ++ + N T + N
Sbjct: 289 QQLTAVVTGSSNAAVNWSMSP----SVGGLTSSGATAIYTAPSSLSSSQNVTITATPMAN 344
Query: 189 SIKLEGSL--VVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTL 246
K ++ +V V + +VTL+ + F GS+ + W S +
Sbjct: 345 PTKSASAIFALVQAVAVAMSPTSVTLRPSSSQQ-----FTAQVTGSSNASVNWSISPALG 399
Query: 247 TISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGS 281
TI + + LT T+TV + A + S
Sbjct: 400 TIDSTGRYVAPASVLTAQTVTVTAQSVADPTQSAS 434
>ref|NP_688040.1| hypothetical protein SAG1030 [Streptococcus agalactiae 2603V/R]
Length = 304
Score = 33.1 bits (74), Expect = 5.2
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 26/170 (15%)
Query: 111 VKLTVSADLNTVTLE---AFDASNQKISSKVTKKQGSITE------ETLKANKLDSKKLT 161
V + DL++V LE A D ++ KI+ + + E + K+N KK
Sbjct: 85 VSICGDEDLDSVVLESKLASDRASLKIAEALLEHLNDDPEPSKSAISSTKSNIKKLKKRI 144
Query: 162 RSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVV---------------GKTTVEIK 206
+SN L+ +A +AT + + +L GK T
Sbjct: 145 KSNQKKLDNLNEFNAHSATVFADISNAQSTVNQALAAVSTGFSGYNSKTGAFGKPTSGQM 204
Query: 207 EGTVTLKREIEK--DGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKK 254
E T T+K+ ++ D K + + A +KK K E++T +S D KK
Sbjct: 205 EWTKTVKKNWKEREDAKAEELKSKKAEESKKASKIENTTKKSNVSVDKKK 254
>ref|YP_818876.1| hypothetical protein LEUM_1410 [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 1025
Score = 33.1 bits (74), Expect = 5.2
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 23/176 (13%)
Query: 113 LTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGTTLEYSQ 172
+T++A V+ + + +SS T K + T + S T+S+ TT
Sbjct: 20 VTIAAIPTLVSADTTTSDTTTVSSDTTTKSDTTT--------VSSDTTTKSDTTTASSDT 71
Query: 173 ITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGS 232
T AD AT + +T + S T T T + +DTA
Sbjct: 72 TTTADTATASSDTTTTADTATASSDTATTA-----DTATASSDTATKTDTATASSDTATK 126
Query: 233 NKKTGKWEDSTS---TLTISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGSASEI 285
T D+T+ T T+S+D+ D T T + T++E S++
Sbjct: 127 ADTTTASSDTTTKADTTTVSSDTTTKAD-------TTTASSETASSTTVEPLDSDV 175
>ref|NP_614987.1| cheR methyltransferase [Methanosarcina acetivorans C2A]
Length = 382
Score = 33.1 bits (74), Expect = 5.2
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 203 VEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGK 238
+EI +G V + E K+ K K+ LN+ GSN+KT K
Sbjct: 1 MEINKGGVKINEEGVKESKNKIRLNEKIGSNEKTDK 36
>ref|NP_375274.1| FmtB protein [Staphylococcus aureus subsp. aureus N315]
Length = 2481
Score = 33.1 bits (74), Expect = 5.2
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G ++ +N + + NAK ++ AVT + ++ N ++EKN++
Sbjct: 1338 GVDTAKDAGKNSIQSTQPATAVKSNAKNEVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 1396
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 1397 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 1446
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 1447 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 1506
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 1507 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 1544
>ref|NP_372684.1| FmtB protein [Staphylococcus aureus subsp. aureus Mu50]
Length = 2481
Score = 33.1 bits (74), Expect = 5.2
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 20 GAESIGSQKENDLNLEDSSKKSHQNAKQDLP-AVTEDSVSLFNGNKIFVSKEKNSSGKYD 78
G ++ +N + + NAK ++ AVT + ++ N ++EKN++
Sbjct: 1338 GVDTAKDAGKNSIQSTQPATAVKSNAKNEVDQAVTTQNQAIDNTTGA-TTEEKNAAKDLV 1396
Query: 79 LRATIDQVELKGTSDKNNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAF--DASNQKISS 136
L+A + K D N T D +++K AD+ +T + D + ++++
Sbjct: 1397 LKA-----KEKAYQDILNAQTT-----NDVTQIKDQAVADIQGITADTTIKDVAKDELAT 1446
Query: 137 KVTKKQGSI-------TEETLKANKLDSKKLTRSNGTTLEYSQITDA----DNATKAVET 185
K +++ I TEE +AN+ +LT+ N I D DNA +A++
Sbjct: 1447 KANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKDNAIQAIDP 1506
Query: 186 LKNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTG 237
++ S + KT + T E K+ LN+ +N++ G
Sbjct: 1507 IQASTDV-------KTNARAELLT-------EMQNKITEILNNNETTNEEKG 1544
>ref|NP_290185.1| putative adhesin [Escherichia coli O157:H7 EDL933]
Length = 1588
Score = 33.1 bits (74), Expect = 5.2
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 17/155 (10%)
Query: 129 ASNQKISSKVTKKQGSITEETLKANKLDSKKLTRSNGT--TLEYSQITDADNATKAVETL 186
A+N S +T+ ++ E+ LK +K D+ T ++GT T + + + D D T + + +
Sbjct: 586 ATNTTNISNLTETVTNLGEDALKWDK-DNGVFTAAHGTETTSKITNVKDGDLTTGSTDAV 644
Query: 187 KNSIKLEGSLVVGKTTVEIKEGTVTLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTL 246
S + V T I T + E + KW+
Sbjct: 645 NGSQLKTTNDAVATNTTNIATNTTNISNLTET----------VTNLGEDALKWDKDNGVF 694
Query: 247 TISADSKKTKDLVFLTDGTITVQQYNTAGTSLEGS 281
T + + + + DGT+T T+ ++ GS
Sbjct: 695 TAAHGNNTASKITNILDGTVTA----TSSDAINGS 725
>ref|NP_489146.1| hypothetical protein all5106 [Nostoc sp. PCC 7120]
Length = 815
Score = 33.1 bits (74), Expect = 5.2
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 143 GSITEETLKANKLDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLE-GSLVVGKT 201
G +TE + N++ S G L+Y + + + +L N + GS+ V
Sbjct: 230 GGVTEGEVTLNRV-------SQGFNLDYQKTSTFGDIDFTERSLVNVNGINAGSIQVQGR 282
Query: 202 TVEIKEGTV--TLKREIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLV 259
TV + +G+V R I+K G + VF +DT + T + TS + + S ++ ++
Sbjct: 283 TVSLTDGSVLWVQNRGIQKGGDIYVFASDTLKLSGATTDLKIRTSIINEAVSSGRSGNIS 342
Query: 260 FLT 262
+T
Sbjct: 343 VVT 345
>ref|YP_186621.1| hypothetical protein SACOL1788 [Staphylococcus aureus subsp. aureus
COL]
Length = 505
Score = 33.1 bits (74), Expect = 5.2
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 10/225 (4%)
Query: 35 EDSSKKSHQNAKQDLPAVTEDSVSLFNGNKIFVSKEKNSSGKYDLRATIDQVELKGTSDK 94
E K A++D +T+D+ + K+ VSK ++ + + A Q +L S +
Sbjct: 284 EVQEAKKEAQAEKDSDTLTKDA----SAAKVEVSKPESQAERLANAAKQKQAKLTPGSKE 339
Query: 95 NNGSGTLEGSKPDKSKVKLTVSADLNTVTLEAFDASNQKISSKVTKKQGSITEETLKANK 154
+ + L KP +K L L T + + I +K T KQ E +
Sbjct: 340 SQLTEALFAEKP-VAKNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFENGVITR 398
Query: 155 LDSKKLTRSNGTTLEYSQITDADNATKAVETLKNSIKLEGSLVVGKTTVEIKEGTVTLKR 214
+K T N T ++ + T + + +N+ K + G+ K+ + K+
Sbjct: 399 KADEKTT--NNTAVDKKSGKQSKKTTPSNK--RNASKASTNKTSGQKKQHNKKSSQGAKK 454
Query: 215 EIEKDGKVKVFLNDTAGSNKKTGKWEDSTSTLTISADSKKTKDLV 259
+ K N T+ N KT + S ++ T +A +K K +
Sbjct: 455 Q-SSSSKSTQKNNQTSNKNSKTTNAKSSNASKTPNAKVEKAKSKI 498
Database: microbial_pathogendb
Posted date: Jun 24, 2009 1:46 AM
Number of letters in database: 450,636,632
Number of sequences in database: 1,433,584
Lambda K H
0.300 0.120 0.302
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,143,039
Number of Sequences: 1433584
Number of extensions: 7689633
Number of successful extensions: 19320
Number of sequences better than 10.0: 369
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 360
Number of HSP's that attempted gapping in prelim test: 18931
Number of HSP's gapped (non-prelim): 680
length of query: 296
length of database: 450,636,632
effective HSP length: 122
effective length of query: 174
effective length of database: 275,739,384
effective search space: 47978652816
effective search space used: 47978652816
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 72 (32.3 bits)