BLASTP 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= P23024|TCPA2_VIBCH Toxin coregulated pilin - Vibrio
cholerae.
(224 letters)
Database: microbial_pathogendb
1,433,584 sequences; 450,636,632 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_230476.1| toxin co-regulated pilin [Vibrio cholerae ... 308 5e-83
ref|YP_206833.1| TcpA, toxin co-regulated pilin precursor [... 167 8e-41
ref|YP_956974.1| hypothetical protein Maqu_4208 [Marinobact... 45 6e-04
ref|YP_438971.1| type IV pilus biogenesis protein, putative... 45 8e-04
ref|YP_630729.1| general secretion pathway protein G [Myxoc... 44 0.002
ref|NP_053065.1| Bundlin [Escherichia coli] 43 0.003
ref|YP_106184.1| putative type IV pilus biogenesis protein ... 43 0.003
ref|YP_335810.1| putative major pilin subunit [Burkholderia... 43 0.004
ref|YP_111603.1| major pilin subunit [Burkholderia pseudoma... 43 0.004
ref|YP_552198.1| putative type IV pilus biogenesis protein ... 42 0.005
ref|YP_552004.1| type IV pilus biogenesis protein, putative... 42 0.005
ref|YP_430403.1| N-terminal methylation [Moorella thermoace... 42 0.007
ref|YP_297425.1| General secretion pathway protein G [Ralst... 42 0.009
ref|NP_232053.1| fimbrial protein [Vibrio cholerae O1 biova... 41 0.012
ref|NP_903481.1| general secretion pathway protein G [Chrom... 40 0.020
ref|NP_249372.1| HxcT pseudopilin [Pseudomonas aeruginosa P... 40 0.020
ref|YP_792613.1| HxcT pseudopilin [Pseudomonas aeruginosa U... 40 0.020
ref|YP_777755.1| putative type IV pilus biogenesis protein ... 40 0.020
ref|YP_205568.1| pilin subunit PilA [Vibrio fischeri ES114] 40 0.020
ref|YP_585525.1| General secretion pathway protein G [Ralst... 40 0.020
ref|NP_968476.1| General secretion pathway protein G precur... 40 0.020
ref|YP_579537.1| Fimbrial protein pilin [Psychrobacter cryo... 40 0.026
ref|YP_308284.1| general secretion family protein [Dehaloco... 40 0.026
ref|YP_760569.1| general secretion pathway protein G [Hypho... 40 0.034
ref|YP_777753.1| type IV prepilin [Burkholderia cepacia AMMD] 40 0.034
ref|ZP_00419258.1| General secretion pathway protein G [Azo... 39 0.044
ref|YP_348908.1| General secretion pathway protein G [Pseud... 39 0.044
ref|YP_959942.1| Fimbrial protein pilin [Marinobacter aquae... 39 0.044
ref|YP_315190.1| type II secretion systen protein G [Thioba... 39 0.044
ref|NP_520423.1| PROBABLE GSPG-RELATED SIGNAL PEPTIDE PROTE... 39 0.044
ref|YP_182071.1| general secretion family protein [Dehaloco... 39 0.075
ref|NP_754287.1| Putative type IV pilin protein precursor [... 39 0.075
ref|YP_727962.1| general secretion pathway protein G [Ralst... 39 0.075
ref|YP_669814.1| putative type IV pilin protein precursor [... 39 0.075
ref|YP_315051.1| tyep II secretion system protein G [Thioba... 39 0.075
ref|NP_521227.1| PUTATIVE GENERAL SECRETION PATHWAY G TRANS... 39 0.075
ref|YP_338925.1| prepilin peptidase dependent protein D [Ps... 38 0.098
ref|YP_259859.1| type II secretion pathway protein XcpT [Ps... 38 0.13
ref|NP_273084.1| pilin PilE [Neisseria meningitidis MC58] 38 0.13
ref|YP_871281.1| methylation site containing protein [Shewa... 38 0.13
ref|YP_274392.1| general secretion pathway protein GspG [Ps... 38 0.13
ref|YP_263546.1| probable pilus assembly protein major pili... 38 0.13
ref|NP_772659.1| probable general secretion pathway protein... 37 0.17
ref|YP_437975.1| Tfp pilus assembly protein, major pilin Pi... 37 0.17
ref|YP_926251.1| prepilin-type cleavage/methylation [Shewan... 37 0.17
ref|YP_123640.1| type II secretory pathway protein LspG [Le... 37 0.17
ref|YP_126663.1| type II secretory pathway protein LspG [Le... 37 0.17
ref|YP_154767.1| Type II secretory pathway component [Idiom... 37 0.17
ref|YP_095391.1| type II protein secretion LspG [Legionella... 37 0.17
ref|YP_065191.1| similar to prepilin peptidase dependent pr... 37 0.22
ref|YP_944541.1| hypothetical protein Ping_3255 [Psychromon... 37 0.22
ref|YP_605805.1| periplasmic sensor signal transduction his... 37 0.22
ref|YP_615374.1| General secretion pathway protein G [Sphin... 37 0.22
ref|YP_632006.1| general secretion pathway protein G [Myxoc... 37 0.22
ref|NP_863731.1| hypothetical protein-signal peptide and tr... 37 0.29
ref|NP_213294.1| general secretion pathway protein G [Aquif... 37 0.29
ref|YP_049766.1| putative type IV pilin protein precursor [... 37 0.29
ref|YP_965064.1| general secretion pathway protein G [Shewa... 37 0.29
ref|YP_773322.1| general secretion pathway protein G [Burkh... 37 0.29
ref|YP_532871.1| General secretion pathway protein G [Rhodo... 37 0.29
ref|YP_586835.1| secretory pathway pseudopilin PulG [Ralsto... 37 0.29
ref|NP_638446.1| pilin [Xanthomonas campestris pv. campestr... 36 0.37
ref|YP_745588.1| general secretion pathway protein G [Granu... 36 0.37
ref|YP_605501.1| Fimbrial protein pilin [Deinococcus geothe... 36 0.37
ref|YP_242148.1| pilin [Xanthomonas campestris pv. campestr... 36 0.37
ref|YP_191420.1| General secretion protein G [Gluconobacter... 36 0.37
ref|YP_384811.1| N-terminal methylation [Geobacter metallir... 36 0.37
ref|YP_560987.1| General secretion pathway protein G [Burkh... 36 0.37
ref|YP_546527.1| General secretion pathway protein G [Methy... 36 0.37
ref|YP_159239.1| fimbrial protein precursor PilE (MS11 anti... 36 0.49
ref|YP_157025.1| class II pilin protein PilE [Azoarcus sp. ... 36 0.49
ref|YP_104299.1| general secretion pathway protein G [Burkh... 36 0.49
ref|YP_286421.1| General secretion pathway protein G [Dechl... 36 0.49
ref|YP_480321.1| Peptidoglycan glycosyltransferase [Frankia... 36 0.49
ref|YP_607941.1| Probable type II secretion pathway protein... 36 0.49
ref|YP_771943.1| general secretion pathway protein G [Burkh... 36 0.49
ref|YP_746747.1| general secretion pathway protein G [Nitro... 36 0.49
ref|YP_833705.1| general secretion pathway protein G [Burkh... 36 0.49
ref|YP_619901.1| General secretion pathway protein G [Burkh... 36 0.49
ref|YP_331640.1| general secretion pathway protein G [Burkh... 36 0.49
ref|YP_551455.1| methylation [Polaromonas sp. JS666] 36 0.49
ref|YP_106636.1| general secretory pathway protein G [Burkh... 36 0.49
ref|YP_440571.1| general secretion pathway protein G [Burkh... 36 0.49
ref|YP_367486.1| General secretion pathway protein G [Burkh... 36 0.49
ref|NP_841650.1| Bacterial general secretion pathway protei... 35 0.64
ref|YP_347705.1| General secretion pathway protein G [Pseud... 35 0.64
ref|YP_526826.1| hypothetical protein Sde_1352 [Saccharopha... 35 0.64
ref|YP_271235.1| general secretion pathway protein G [Colwe... 35 0.64
ref|YP_271217.1| MSHA pilin protein MshA [Colwellia psychre... 35 0.64
ref|NP_283104.1| fimbrial protein precursor (pilin) [Neisse... 35 0.64
ref|YP_941932.1| methylation site containing protein [Psych... 35 0.64
ref|YP_463895.1| hypothetical protein Adeh_0682 [Anaeromyxo... 35 0.64
ref|YP_383702.1| N-terminal methylation [Geobacter metallir... 35 0.64
ref|NP_520422.1| PUTATIVE GSPG-RELATED PROTEIN [Ralstonia s... 35 0.64
ref|NP_815655.1| ATPase, AAA family [Enterococcus faecalis ... 35 0.83
ref|NP_251791.1| general secretion pathway protein G [Pseud... 35 0.83
ref|YP_790072.1| general secretion pathway protein G [Pseud... 35 0.83
ref|YP_743221.1| general secretion pathway protein G [Alkal... 35 0.83
ref|YP_662790.1| general secretion pathway protein G [Pseud... 35 0.83
ref|YP_561144.1| General secretion pathway protein G [Shewa... 35 0.83
ref|YP_552008.1| methylation [Polaromonas sp. JS666] 35 0.83
ref|YP_586836.1| secretory pathway pseudopilin PulG [Ralsto... 35 0.83
ref|YP_933593.1| general secretion pathway protein G [Azoar... 35 1.1
ref|YP_736217.1| general secretion pathway protein G [Shewa... 35 1.1
ref|YP_732297.1| general secretion pathway protein G [Shewa... 35 1.1
ref|YP_890666.1| [NADP+] succinate-semialdehyde dehydrogena... 35 1.1
ref|NP_870701.1| hypothetical protein RB12783 [Rhodopirellu... 35 1.1
ref|YP_051196.1| general secretion pathway protein G [Erwin... 35 1.1
ref|NP_760356.1| MSHA pilin protein MshA [Vibrio vulnificus... 35 1.1
ref|NP_715811.1| general secretion pathway protein G [Shewa... 35 1.1
ref|NP_935571.1| type IV pilin PilA [Vibrio vulnificus YJ016] 35 1.1
ref|YP_065188.1| similar to fimbrial protein [Precursor] [D... 35 1.1
ref|YP_271092.1| type IV pilin [Colwellia psychrerythraea 34H] 35 1.1
ref|YP_867804.1| general secretion pathway protein G [Shewa... 35 1.1
ref|YP_958045.1| type II secretory pathway, pseudopilin Pul... 35 1.1
ref|YP_902077.1| type II secretion system protein G [Peloba... 35 1.1
ref|YP_371831.1| General secretion pathway protein G [Burkh... 35 1.1
ref|YP_735602.1| methylation site containing protein [Shewa... 34 1.4
ref|NP_760518.1| Type IV pilin PilA [Vibrio vulnificus CMCP6] 34 1.4
ref|YP_347721.1| hypothetical protein Pfl_1989 [Pseudomonas... 34 1.4
ref|NP_642979.1| pre-pilin leader sequence [Xanthomonas axo... 34 1.4
ref|YP_972988.1| Tfp pilus assembly protein major pilin Pil... 34 1.4
ref|YP_436376.1| Tfp pilus assembly protein, major pilin Pi... 34 1.4
ref|YP_357553.1| pilus-related protein, putative [Pelobacte... 34 1.4
ref|NP_518678.1| PROBABLE TYPE 4 FIMBRIAL PILIN SIGNAL PEPT... 34 1.4
ref|YP_462277.1| general secretion pathway protein G [Syntr... 34 1.9
ref|NP_294958.1| hypothetical protein DR1234 [Deinococcus r... 34 1.9
ref|YP_826937.1| Tfp pilus assembly protein PilE-like prote... 34 1.9
ref|NP_798902.1| type IV pilin PilA [Vibrio parahaemolyticu... 34 1.9
ref|YP_413271.1| General secretion pathway protein G [Nitro... 34 1.9
ref|YP_344258.1| putative type-4 fimbrial pilin related sig... 34 1.9
ref|YP_561145.1| General secretion pathway protein H [Shewa... 34 1.9
ref|YP_390523.1| General secretion pathway protein G [Thiom... 34 1.9
ref|YP_124207.1| hypothetical protein lpp1890 [Legionella p... 34 1.9
ref|YP_548169.1| General secretion pathway protein G [Polar... 34 1.9
ref|YP_546519.1| methylation [Methylobacillus flagellatus KT] 34 1.9
ref|YP_273019.1| pre-pilin leader sequence [Pseudomonas syr... 34 1.9
ref|YP_159819.1| general secretory pathway protein G [Azoar... 33 2.4
ref|NP_230065.1| MSHA pilin protein MshD [Vibrio cholerae O... 33 2.4
ref|NP_294271.1| pilin, type IV, putative [Deinococcus radi... 33 2.4
ref|YP_745579.1| general secretion pathway protein H [Granu... 33 2.4
ref|YP_610119.1| type IV pili prepilin PilA [Pseudomonas en... 33 2.4
ref|YP_521816.1| General secretion pathway protein G [Rhodo... 33 2.4
ref|YP_748809.1| general secretion pathway protein G [Shewa... 33 2.4
ref|NP_521703.1| PUTATIVE GENERAL SECRETION PATHWAY GSPG RE... 33 2.4
ref|ZP_00415597.1| Fimbrial protein pilin [Azotobacter vine... 33 3.2
ref|NP_418981.1| hypothetical protein CC0162 [Caulobacter c... 33 3.2
ref|NP_742795.1| type IV pili prepilin PilA [Pseudomonas pu... 33 3.2
ref|YP_436375.1| Tfp pilus assembly protein, major pilin Pi... 33 3.2
ref|YP_435080.1| general secretion pathway protein G [Hahel... 33 3.2
ref|YP_844240.1| general secretion pathway protein G [Syntr... 33 3.2
ref|YP_746756.1| type II secretion system protein G [Nitros... 33 3.2
ref|YP_127217.1| hypothetical protein lpl1879 [Legionella p... 33 3.2
ref|YP_574223.1| methylation [Chromohalobacter salexigens D... 33 3.2
ref|NP_622885.1| hypothetical protein TTE1265 [Thermoanaero... 33 3.2
ref|YP_157675.1| putative bacterial general secretion pathw... 33 4.1
ref|YP_933601.1| general secretion pathway protein G [Azoar... 33 4.1
ref|YP_739351.1| methylation site containing protein [Shewa... 33 4.1
ref|YP_732847.1| methylation site containing protein [Shewa... 33 4.1
ref|ZP_00417329.1| putative general secretion pathway prote... 33 4.1
ref|NP_903879.1| type IV pilin [Chromobacterium violaceum A... 33 4.1
ref|NP_864400.1| hypothetical protein-transmembrane region ... 33 4.1
ref|NP_868237.1| hypothetical protein-putative conserved hy... 33 4.1
ref|YP_828963.1| general secretion pathway protein G [Solib... 33 4.1
ref|NP_790766.1| type IV pilus biogenesis protein [Pseudomo... 33 4.1
ref|YP_741094.1| Fimbrial protein pilin [Alkalilimnicola eh... 33 4.1
ref|YP_871053.1| methylation site containing protein [Shewa... 33 4.1
ref|YP_755615.1| general secretion pathway protein G [Maric... 33 4.1
ref|YP_692335.1| Pilin protein family, putative [Alcanivora... 33 4.1
ref|YP_855105.1| general secretion pathway protein G [Aerom... 33 4.1
ref|YP_847768.1| hypothetical protein Sfum_3663 [Syntrophob... 33 4.1
ref|YP_926053.1| general secretion pathway protein G [Shewa... 33 4.1
ref|YP_578174.1| Type I secretion system ATPase, PrtD [Nitr... 33 4.1
ref|YP_748810.1| general secretion pathway protein H [Shewa... 33 4.1
ref|YP_131551.1| putative type II secretory pathway, pseudo... 33 4.1
ref|YP_131384.1| putative MSHA pilin protein MshA [Photobac... 33 4.1
ref|YP_123639.1| type II secretory pathway protein LspH [Le... 33 4.1
ref|YP_126662.1| type II secretory pathway protein LspH [Le... 33 4.1
ref|YP_315958.1| pilus assembly protein PilA [Thiobacillus ... 33 4.1
ref|YP_315060.1| type II secretion system protein [Thiobaci... 33 4.1
ref|YP_314300.1| hypothetical protein Tbd_0542 [Thiobacillu... 33 4.1
ref|YP_463896.1| General secretion pathway protein G [Anaer... 33 4.1
ref|YP_095390.1| general secretion pathway protein LspH [Le... 33 4.1
ref|YP_587904.1| hypothetical protein Rmet_5776 [Ralstonia ... 33 4.1
ref|NP_065346.1| minor pilin subunit PilV [Escherichia coli] 32 5.4
ref|NP_864461.1| similar to general secretion pathway prote... 32 5.4
ref|NP_994149.1| general secretion pathway protein G [Yersi... 32 5.4
ref|NP_841776.1| Fimbrial protein pilin [Nitrosomonas europ... 32 5.4
ref|NP_790659.1| hypothetical protein PSPTO_0812 [Pseudomon... 32 5.4
ref|YP_259856.1| general secretion pathway protein H [Pseud... 32 5.4
ref|NP_404438.1| general secretion pathway protein G [Yersi... 32 5.4
ref|NP_716485.1| type IV pilin, putative [Shewanella oneide... 32 5.4
ref|NP_641051.1| type II secretion system protein G [Xantho... 32 5.4
ref|NP_670500.1| general protein secretion protein [Yersini... 32 5.4
ref|YP_741701.1| general secretion pathway protein H [Alkal... 32 5.4
ref|NP_417790.1| predicted general secretory pathway compon... 32 5.4
ref|YP_854404.1| putative type II secretion protein GspG [E... 32 5.4
ref|YP_858932.1| putative general secretion pathway protein... 32 5.4
ref|YP_757998.1| general secretion pathway protein G [Maric... 32 5.4
ref|YP_648944.1| general secretion pathway protein G [Yersi... 32 5.4
ref|YP_542754.1| probable general secretion pathway protein... 32 5.4
ref|YP_542360.1| hypothetical type II secretion protein Gsp... 32 5.4
ref|YP_671300.1| probable general secretion pathway protein... 32 5.4
ref|YP_670927.1| hypothetical type II secretion protein [Es... 32 5.4
ref|YP_650369.1| general secretion pathway protein G [Yersi... 32 5.4
ref|YP_941573.1| general secretion pathway protein G [Psych... 32 5.4
ref|YP_394461.1| hypothetical protein Tmden_1952 [Thiomicro... 32 5.4
ref|YP_344523.1| general secretion pathway protein H [Nitro... 32 5.4
ref|YP_317576.1| type I secretion system ATPase, PrtD [Nitr... 32 5.4
ref|AP_004459.1| predicted general secretory pathway compon... 32 5.4
ref|YP_409351.1| putative type II secretion protein [Shigel... 32 5.4
ref|YP_404603.1| putative type II secretion protein [Shigel... 32 5.4
ref|YP_071567.1| general secretion pathway protein G [Yersi... 32 5.4
ref|NP_520431.1| PUTATIVE GSPG-RELATED TRANSMEMBRANE PROTEI... 32 5.4
ref|YP_545452.1| General secretion pathway protein G [Methy... 32 5.4
ref|YP_462325.1| tfp pilus assembly protein, major pilin [S... 32 7.1
ref|ZP_00055704.1| COG2931: RTX toxins and related Ca2+-bin... 32 7.1
ref|ZP_00767094.1| GAF [Chloroflexus aurantiacus J-10-fl] 32 7.1
ref|NP_866707.1| hypothetical protein RB5451 [Rhodopirellul... 32 7.1
ref|NP_797035.1| putative fimbrial assembly protein PilE [V... 32 7.1
ref|NP_759850.1| Type II secretory pathway, pseudopilin Eps... 32 7.1
ref|YP_325596.1| type II secretion protein [Escherichia col... 32 7.1
ref|YP_518646.1| hypothetical protein DSY2413 [Desulfitobac... 32 7.1
ref|YP_969297.1| general secretion pathway protein G [Acido... 32 7.1
ref|NP_052612.1| EtpG [Escherichia coli O157:H7 str. Sakai] 32 7.1
ref|YP_355569.1| type II secretory pathway, pseudopilin Pul... 32 7.1
ref|YP_390742.1| methylation site [Thiomicrospira crunogena... 32 7.1
ref|YP_095932.1| Tfp pilus assembly protein, major type IV ... 32 7.1
ref|NP_967254.1| hypothetical protein Bd0249 [Bdellovibrio ... 32 7.1
ref|YP_932300.1| hypothetical protein azo0796 [Azoarcus sp.... 32 9.2
ref|NP_930084.1| hypothetical protein plu2850 [Photorhabdus... 32 9.2
ref|YP_822344.1| general secretion pathway protein G [Solib... 32 9.2
ref|NP_841642.1| putative general secretion pathway gspG re... 32 9.2
ref|NP_715812.1| general secretion pathway protein H [Shewa... 32 9.2
ref|NP_253215.1| type 4 fimbrial precursor PilA [Pseudomona... 32 9.2
ref|NP_935733.1| MSHA pilin protein MshA [Vibrio vulnificus... 32 9.2
ref|YP_065777.1| similar to fimbrial protein [Precursor] [D... 32 9.2
ref|YP_269340.1| acetyl-CoA acetyltransferase [Colwellia ps... 32 9.2
ref|NP_417787.1| pseudopilin, cryptic, general secretion pa... 32 9.2
ref|YP_964968.1| methylation site containing protein [Shewa... 32 9.2
ref|YP_659823.1| general secretion pathway protein J [Pseud... 32 9.2
ref|YP_900497.1| hypothetical protein Ppro_0809 [Pelobacter... 32 9.2
ref|YP_344869.1| General secretion pathway protein G [Nitro... 32 9.2
ref|YP_604231.1| glutamyl-tRNA(Gln) amidotransferase, A sub... 32 9.2
ref|AP_004462.1| pseudopilin, cryptic, general secretion pa... 32 9.2
ref|YP_781578.1| general secretion pathway protein G [Rhodo... 32 9.2
ref|YP_131308.1| hypothetical pilin PilA [Photobacterium pr... 32 9.2
ref|YP_133276.1| hypothetical polyprotein [Photobacterium p... 32 9.2
ref|YP_643937.1| hypothetical protein Rxyl_1159 [Rubrobacte... 32 9.2
ref|YP_294759.1| general secretion pathway protein H [Ralst... 32 9.2
ref|YP_633668.1| putative lipoprotein [Myxococcus xanthus D... 32 9.2
ref|YP_630726.1| type II secretion operon protein [Myxococc... 32 9.2
>ref|NP_230476.1| toxin co-regulated pilin [Vibrio cholerae O1 biovar eltor str.
N16961]
Length = 224
Score = 308 bits (788), Expect = 5e-83
Identities = 158/204 (77%), Positives = 174/204 (85%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQ MTKAAQ+LNS+Q+A+TQTYR LG
Sbjct: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQNMTKAAQNLNSVQIAMTQTYRSLG 80
Query: 81 NYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDGL 140
NYPATA+A AA++L +GLVSLGK+S+DEAKNPF GT M IFSFPRN+AANKAFAI+V GL
Sbjct: 81 NYPATANANAATQLANGLVSLGKVSADEAKNPFTGTAMGIFSFPRNSAANKAFAITVGGL 140
Query: 141 TQAQCKTLITSVGDMFPYIAIKXXXXXXXXXXXXFENSAAAAETGVGVIKSIAPASKNLD 200
TQAQCKTL+TSVGDMFP+I +K FE S A A TG GVIKSIAP S NL+
Sbjct: 141 TQAQCKTLVTSVGDMFPFINVKEGAFAAVADLGDFETSVADAATGAGVIKSIAPGSANLN 200
Query: 201 LTNITHVEKLCKGTAPFGVAFGNS 224
LTNITHVEKLC GTAPF VAFGNS
Sbjct: 201 LTNITHVEKLCTGTAPFTVAFGNS 224
>ref|YP_206833.1| TcpA, toxin co-regulated pilin precursor [Vibrio fischeri ES114]
Length = 208
Score = 167 bits (424), Expect = 8e-41
Identities = 97/206 (47%), Positives = 127/206 (61%), Gaps = 9/206 (4%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q GMTLLEVIIVLGIMGV+SAGVV LAQRAID+Q ++K +Q+LN+IQ A+ QTYR +Y
Sbjct: 6 QRGMTLLEVIIVLGIMGVISAGVVILAQRAIDNQNVSKLSQALNTIQTAMVQTYRSKQSY 65
Query: 83 P-ATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDGLT 141
P DA A KLT LVS+G+++ + NPF G M IF+ N AAN+ FAI V L+
Sbjct: 66 PDVLQDAVKAKKLTDALVSMGRVTESDLINPFTGAPMLIFTAKDNKAANRGFAIKVSDLS 125
Query: 142 QAQCKTLITSVGDMFPYIAIKXXXXXXXXXXXXFENSAAAAETGVGVIKSIAPASKNLDL 201
+ QC +LI++ D+F +I ++ + A VGVIKS +K LDL
Sbjct: 126 KDQCTSLISNSADLFSFIEVQNRGTAMAADFYVDPD----ATKSVGVIKSTKGGAKTLDL 181
Query: 202 TNITHVEKLC----KGTAPFGVAFGN 223
TN+ H+ LC G + F V GN
Sbjct: 182 TNLDHISALCGGPGAGDSYFDVFVGN 207
>ref|YP_956974.1| hypothetical protein Maqu_4208 [Marinobacter aquaeolei VT8]
Length = 200
Score = 45.4 bits (106), Expect = 6e-04
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E ++V GI+ +V VV LA + SQ AQ+++S L Y G +Y
Sbjct: 30 QQGYTLIETLLVAGILAIVIGSVVGLALSSSASQTARAEAQTIDSAGNKLKSIYGGRPSY 89
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKNPFNG---TNMNIFSFPRNAAAN--KAFAISV 137
A D A L S+G D A N F G N S P+ AAN + F I
Sbjct: 90 -AGLDTGVAQDLQIWPESMG----DPAMNQFGGAVAVNTPPDS-PKGPAANGSRQFQIDW 143
Query: 138 DGLTQAQCKTLITS 151
+ ++ C L ++
Sbjct: 144 ESVSADACPELASA 157
>ref|YP_438971.1| type IV pilus biogenesis protein, putative [Burkholderia
thailandensis E264]
Length = 183
Score = 45.1 bits (105), Expect = 8e-04
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 12/135 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G +LLE I LG+ +V G + L A S + A+ LN+IQ + Y G N
Sbjct: 23 ERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQVNT 82
Query: 83 PATADATA---ASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDG 139
TA A A+K+ + G ++D N + GT A + F +
Sbjct: 83 YGTASLNANLIAAKVFPNTLPTG--TNDAVSNTWGGT-------VTVKGAGQTFTVEYTN 133
Query: 140 LTQAQCKTLITSVGD 154
+ + C +T+ G+
Sbjct: 134 VPRDVCINTLTAGGN 148
>ref|YP_630729.1| general secretion pathway protein G [Myxococcus xanthus DK 1622]
Length = 141
Score = 43.9 bits (102), Expect = 0.002
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
GMTL+E+++V+ I+G+++A V +++ +AA + +IQ A+ Y G YP
Sbjct: 16 GMTLIEIMVVITILGLIAAAVGVAVIPQLEAARRDRAALDIKNIQGAMKLYYTKKGKYPD 75
Query: 85 TADATAASKLTSGLVSLGKISSDEAKNPF----NGTNMNIFSFPRNAAA----NKAFAIS 136
TA A L + K D N + G I S+ + A+ N A S
Sbjct: 76 TASGLQALVEAQALEQMPK---DPWNNDYVYINEGGKPVIISYGADGASGGEGNDADISS 132
Query: 137 VDGLTQAQ 144
D T A+
Sbjct: 133 ADAATSAK 140
>ref|NP_053065.1| Bundlin [Escherichia coli]
Length = 193
Score = 43.1 bits (100), Expect = 0.003
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 9/183 (4%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G++L+E +VL + V+AGV+ Q A DS A + S A+ Y G +Y
Sbjct: 11 EKGLSLIESAMVLALAATVTAGVMFYYQSASDSNKSQNAISEVMSATSAINGLYIGQTSY 70
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDGLTQ 142
+ D+T ++ + ++ + NPF G +N+ P N + +++ L +
Sbjct: 71 -SGLDSTILLNTSAIPDNYKDTTNKKITNPFGG-ELNV--GPANNNTAFGYYLTLTRLDK 126
Query: 143 AQCKTLIT-SVGDMFPYIAIKXXXXXXXXXXXXFENSAAAAETGVGVIKS-IAPASKNLD 200
A C +L T ++G + F NSA A + + A A KN D
Sbjct: 127 AACVSLATLNLGTSAKGYGVN---ISSENNITSFGNSADQAAKSTAITPAEAATACKNTD 183
Query: 201 LTN 203
TN
Sbjct: 184 STN 186
>ref|YP_106184.1| putative type IV pilus biogenesis protein [Burkholderia mallei ATCC
23344]
Length = 184
Score = 43.1 bits (100), Expect = 0.003
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G +LLE I LG+ +V G + L A S + A+ LN+IQ + Y G N
Sbjct: 23 ERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQVNN 82
Query: 83 PATADATA---ASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDG 139
AD A A+++ + G +++ N + G N+ + A + F +
Sbjct: 83 YGNADLNANLIAARVFPSTLPTG--NNNTVSNAWGG-NVTV------TGAGRTFTVQYTN 133
Query: 140 LTQAQCKTLITSVGD 154
+ + C +T+ G+
Sbjct: 134 VPRDVCINTLTAGGN 148
>ref|YP_335810.1| putative major pilin subunit [Burkholderia pseudomallei 1710b]
Length = 184
Score = 42.7 bits (99), Expect = 0.004
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G +LLE I LG+ +V G + L A S + A+ LN+IQ + Y G N
Sbjct: 23 ERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQVNN 82
Query: 83 PATADATA---ASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDG 139
AD A A+++ + G +++ N + G N+ + A + F +
Sbjct: 83 YGDADLNANLIAARVFPSTLPTG--NNNTVSNAWGG-NVTV------TGAGRTFTVQYTN 133
Query: 140 LTQAQCKTLITSVGD 154
+ + C +T+ G+
Sbjct: 134 VPRDVCINTLTAGGN 148
>ref|YP_111603.1| major pilin subunit [Burkholderia pseudomallei K96243]
Length = 184
Score = 42.7 bits (99), Expect = 0.004
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 12/135 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G +LLE I LG+ +V G + L A S + A+ LN+IQ + Y G N
Sbjct: 23 ERGASLLESIAYLGVAAIVIVGAIALLGSAFSSANTNRLAEELNAIQTGTKKLYMGQVNN 82
Query: 83 PATADATA---ASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDG 139
AD A A+++ + G +++ N + G N+ + A + F +
Sbjct: 83 YGDADLNANLIAARVFPSTLPTG--NNNTVSNAWGG-NVTV------TGAGRTFTVQYTN 133
Query: 140 LTQAQCKTLITSVGD 154
+ + C +T+ G+
Sbjct: 134 VPRDVCINTLTAGGN 148
>ref|YP_552198.1| putative type IV pilus biogenesis protein [Polaromonas sp. JS666]
Length = 187
Score = 42.4 bits (98), Expect = 0.005
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G+TL+E+I L I+ +V G ++L A SQ T+ L++I+ A + G G Y
Sbjct: 22 QAGLTLIELIASLAILALVIGGSLSLYSSATSSQGSTQMTSELSAIRAATKSLFYGQGGY 81
Query: 83 PATADATAASKLTSGLVSLGKISS 106
+ L LVS K+ S
Sbjct: 82 -------GTANLNQVLVSANKVPS 98
>ref|YP_552004.1| type IV pilus biogenesis protein, putative [Polaromonas sp. JS666]
Length = 179
Score = 42.4 bits (98), Expect = 0.005
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G+TL+E+I L I+ +V G + L A SQ ++ + +I+ A Q + G G Y
Sbjct: 14 QAGLTLIELIASLAILALVIGGALALYSSATSSQGSSQMTSEITAIRAATKQVFYGQGGY 73
Query: 83 PATADATAASKLTSGLVSLGKISS 106
+ L LVS K+ S
Sbjct: 74 -------GTANLNQVLVSANKVPS 90
>ref|YP_430403.1| N-terminal methylation [Moorella thermoacetica ATCC 39073]
Length = 171
Score = 42.0 bits (97), Expect = 0.007
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A + +A +ID + A +I+ A+ Y G +
Sbjct: 11 QRGFTLVELLVVIAIIGILAAIIAPVAFNSIDKSKVAAAEADYRTIKAAVLNAYTDTGVW 70
Query: 83 PATADA 88
P ++ A
Sbjct: 71 PPSSTA 76
>ref|YP_297425.1| General secretion pathway protein G [Ralstonia eutropha JMP134]
Length = 163
Score = 41.6 bits (96), Expect = 0.009
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 16/124 (12%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G G TL+E+++V+ I+GV++A VV D + A Q ++SI AL
Sbjct: 27 GSRGFTLIEIMVVIVILGVLAALVVPKIMSRPDEARIVAARQDISSIMQALKLYRLDNSR 86
Query: 82 YPATADATAA--SKLTSGLVS--------LGKISSDEAKNPFNGTN------MNIFSFPR 125
YP T AA +K T+ V L K+ D +P+ N ++IFSF
Sbjct: 87 YPTTEQGLAALVAKPTTEPVPNNWKAGGYLEKLPKDPWGHPYQYLNPGVRGEIDIFSFGA 146
Query: 126 NAAA 129
+ A
Sbjct: 147 DGQA 150
>ref|NP_232053.1| fimbrial protein [Vibrio cholerae O1 biovar eltor str. N16961]
Length = 167
Score = 41.2 bits (95), Expect = 0.012
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ ++GV++A + Q + + ++ +++ + G++
Sbjct: 23 QKGFTLIELMIVVAVIGVLAAIAIPQYQNYVKKSAIGVGLANITALKTNIEDYIATEGSF 82
Query: 83 PATADATAASKLTSGLV---SLGKI-SSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVD 138
PAT TAA G V GKI + A GT ++F ++ ++ D
Sbjct: 83 PATTAGTAAGFTRLGTVEDMGDGKIVIAPTASGALGGTIK--YTFDAGVVSSSKIQLARD 140
Query: 139 GLTQAQCKTLITS 151
C T +TS
Sbjct: 141 ANGLWTCSTTVTS 153
>ref|NP_903481.1| general secretion pathway protein G [Chromobacterium violaceum
ATCC 12472]
Length = 147
Score = 40.4 bits (93), Expect = 0.020
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+GV++A VV D + A Q + +I AL G Y
Sbjct: 9 QRGFTLIEIMVVIVILGVLAALVVPKVMSRPDEARIVAAKQDIGAISQALKLYRLDNGRY 68
Query: 83 PATADATAA 91
P+T +A
Sbjct: 69 PSTDQGLSA 77
>ref|NP_249372.1| HxcT pseudopilin [Pseudomonas aeruginosa PAO1]
Length = 149
Score = 40.4 bits (93), Expect = 0.020
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ G TL+E+++V+ I+G+++A VV D T A Q ++ + AL G
Sbjct: 15 GQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGR 74
Query: 82 YPATA 86
YP+ A
Sbjct: 75 YPSQA 79
>ref|YP_792613.1| HxcT pseudopilin [Pseudomonas aeruginosa UCBPP-PA14]
Length = 149
Score = 40.4 bits (93), Expect = 0.020
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ G TL+E+++V+ I+G+++A VV D T A Q ++ + AL G
Sbjct: 15 GQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGR 74
Query: 82 YPATA 86
YP+ A
Sbjct: 75 YPSQA 79
>ref|YP_777755.1| putative type IV pilus biogenesis protein [Burkholderia cepacia
AMMD]
Length = 164
Score = 40.4 bits (93), Expect = 0.020
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q G TLLE I LGI +V G + L + A S + A+ + +IQ + + Y G N
Sbjct: 2 QRGATLLEAIAYLGIAAIVVIGAIALLRGAFGSASSNQTAEQVTAIQTGVKKLYMGQTN 60
>ref|YP_205568.1| pilin subunit PilA [Vibrio fischeri ES114]
Length = 134
Score = 40.4 bits (93), Expect = 0.020
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ+G TL+E++IV+ ++GV+SA + Q + +L++++ + G+
Sbjct: 6 GQKGFTLIELMIVVAVIGVLSAIAIPKYQEFAKKGAVASGIATLSALKTNVEDHMATNGS 65
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN 114
+PA A + G+V+ S+ K FN
Sbjct: 66 FPANITDIGAIDSSIGVVAFDGTVSNGIKITFN 98
>ref|YP_585525.1| General secretion pathway protein G [Ralstonia metallidurans
CH34]
Length = 154
Score = 40.4 bits (93), Expect = 0.020
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+GV++A VV D + A Q ++S+ AL G YP
Sbjct: 21 GFTLIEIMVVIVILGVLAALVVPKIMSRPDEARIVAARQDISSVMQALKLYRLDNGRYPT 80
Query: 85 TADATAA 91
T AA
Sbjct: 81 TEQGLAA 87
>ref|NP_968476.1| General secretion pathway protein G precursor [Bdellovibrio
bacteriovorus HD100]
Length = 136
Score = 40.4 bits (93), Expect = 0.020
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++GMTL+E++IVL I+G ++A ++ +D +A L I AL+ Y G Y
Sbjct: 7 RKGMTLIEIMIVLAIIGGIAALLLPNITGQLDKSKAKEAKIQLTQIVNALSMYYTDCGKY 66
Query: 83 PATAD 87
P T +
Sbjct: 67 PQTLE 71
>ref|YP_579537.1| Fimbrial protein pilin [Psychrobacter cryohalolentis K5]
Length = 151
Score = 40.0 bits (92), Expect = 0.026
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E++IV+ I+G+++A + Q I + +A + A+ + + G
Sbjct: 3 TAQKGFTLIELMIVIAIIGILAAIAIPAYQDYIARSQVAEAFALTAGQKTAIAEYAQTNG 62
Query: 81 NYPATADA------TAASKLTSGLVSLGKISSDEAKNPFNGTNMNI 120
YP TA A TAA V+ G P N NI
Sbjct: 63 VYPGTATAPTNGSLTAAGTYADATVAAGTGVITVTMKPAGTVNANI 108
>ref|YP_308284.1| general secretion family protein [Dehalococcoides sp. CBDB1]
Length = 119
Score = 40.0 bits (92), Expect = 0.026
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E+++V+ I+GV++A +V + I S + A +++Q+A+T G
Sbjct: 12 QKGFTLIELLVVVAILGVLAAVIVPNVAKFIGSGTVEAANTEAHNVQLAVTAYMAENGGT 71
Query: 83 PATADATAASKLTSGLVSLGKISSD 107
T A +S + L I +D
Sbjct: 72 VPTDTAALSSYIMGTLTGTYTIGTD 96
>ref|YP_760569.1| general secretion pathway protein G [Hyphomonas neptunium ATCC
15444]
Length = 152
Score = 39.7 bits (91), Expect = 0.034
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G +L+E+++V+ IMG+++ ++ D +TKA +++++ AL Q L +Y
Sbjct: 16 EAGFSLVELMVVVFIMGLLATLIIVNVAPVGDRSRVTKAQADISNLENALEQYSLDLYSY 75
Query: 83 PATADATAA-SKLTSGLVS--------LGKISSDEAKNPFNGTNMNIFSFPRNAAANKAF 133
P+T AA S +G+ + + ++ D NP+ T F R+ F
Sbjct: 76 PSTDQGLAALSSPPAGVDATLYRPGGYIRRVQEDPWGNPYQYT----FPGTRSGGRFDVF 131
Query: 134 AISVDG 139
+ DG
Sbjct: 132 SFGADG 137
>ref|YP_777753.1| type IV prepilin [Burkholderia cepacia AMMD]
Length = 565
Score = 39.7 bits (91), Expect = 0.034
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G T++E++ VL + ++ AGVVTL ++D +AA + + A T+ + NY A
Sbjct: 28 GFTMVEMLAVLALAALMMAGVVTLTNSSLDDTRAQQAALYQSQLTAAATRLIQ--QNYTA 85
Query: 85 -TADATAASKLTSGLVSLGKISSDEAKNPFNGTN 117
A AT S + + + S N +GTN
Sbjct: 86 LAAQATTTSPVIAKMTGSTYQLSTYLSNALSGTN 119
>ref|ZP_00419258.1| General secretion pathway protein G [Azotobacter vinelandii AvOP]
Length = 145
Score = 39.3 bits (90), Expect = 0.044
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR-GL 79
T Q G TL+E+++VL I+G+++ V +D + A + ++ +L QTYR +
Sbjct: 9 TRQRGFTLIELLVVLVILGMLAGLVGPRLFSNVDKSKVKTAETQVKMLRGSL-QTYRLDV 67
Query: 80 GNYPATADATAA 91
G+YP TA AA
Sbjct: 68 GSYPTTAQGLAA 79
>ref|YP_348908.1| General secretion pathway protein G [Pseudomonas fluorescens
PfO-1]
Length = 152
Score = 39.3 bits (90), Expect = 0.044
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ+G TL+E+++V+ I+G+++A VV D T A Q + + AL G
Sbjct: 18 GQQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAAKQDIGGLMQALKLYRLDHGT 77
Query: 82 YPA 84
YP+
Sbjct: 78 YPS 80
>ref|YP_959942.1| Fimbrial protein pilin [Marinobacter aquaeolei VT8]
Length = 169
Score = 39.3 bits (90), Expect = 0.044
Identities = 22/72 (30%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSL---NSIQVALTQTYRG 78
GQ+G TL+E++IV+ I+G+++A + Q D I K ++ L ++++ A+T+T++
Sbjct: 9 GQQGFTLIELMIVVAIIGILAAVAIPAYQ---DYTIRAKVSEGLSLSSALKTAVTETFQS 65
Query: 79 LGNYPATADATA 90
G +TA
Sbjct: 66 RGPRSMECSSTA 77
>ref|YP_315190.1| type II secretion systen protein G [Thiobacillus denitrificans ATCC
25259]
Length = 209
Score = 39.3 bits (90), Expect = 0.044
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ G TLLE+++V+ I+G+++ V + + A + +++ AL Q G+
Sbjct: 77 GQRGFTLLELLVVMVILGLLAGYVAPRYFSQVGKSEVKTAQAQIGALEKALDQYRIDTGH 136
Query: 82 YPATADATAA 91
YP T AA
Sbjct: 137 YPTTEQGLAA 146
>ref|NP_520423.1| PROBABLE GSPG-RELATED SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum GMI1000]
Length = 172
Score = 39.3 bits (90), Expect = 0.044
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E++I L ++G+V+ +V L++ A+ Q +L I+ A+ Y+ + +
Sbjct: 20 GFTLIELVITLALVGIVAMAIVPLSELAVQRQKEQALRVALREIRTAI-DAYKEASDSGS 78
Query: 85 TADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRN---------AAAN----K 131
AS L L + D AK+P G M + PR+ AA+ +
Sbjct: 79 VEHEAGASGYPPSLAVLVEGVKD-AKDPKGGLLMFLRRVPRDPFFTGEASTPAADTWNLR 137
Query: 132 AFAISVDGLT 141
A+ + VDG T
Sbjct: 138 AYGVPVDGGT 147
>ref|YP_182071.1| general secretion family protein [Dehalococcoides ethenogenes
195]
Length = 114
Score = 38.5 bits (88), Expect = 0.075
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALT 73
Q+G TL+E+++V+ I+GV++A VV + I S A L++IQ+A+T
Sbjct: 12 QKGFTLIELLVVVAILGVLAAVVVPNVAKFIGSGKTEAMATELHTIQLAVT 62
>ref|NP_754287.1| Putative type IV pilin protein precursor [Escherichia coli CFT073]
Length = 185
Score = 38.5 bits (88), Expect = 0.075
Identities = 27/136 (19%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G +LLE+++VLGI+ + + + SQ + ++ +IQ + Y ++
Sbjct: 11 KKGFSLLELLLVLGIIAALVVAAFIVYPKVQASQRAQAESNNIATIQAGVKALYTSASSF 70
Query: 83 PATADATAA-SKLTSGLVSLGKISSDEAKNPFNG-TNMNIFSFPRNAAANKAFAISVDGL 140
+ A +K+ + G ++ + N F G + + ++A +F I+ D +
Sbjct: 71 TGLTNTVAVQAKIFPDNMLSGSGTAAKPINAFKGNVTLAATATGPSSATGSSFTITYDNV 130
Query: 141 TQAQCKTLITSVGDMF 156
A+C + T+ F
Sbjct: 131 PAAECVKIATAAAGNF 146
>ref|YP_727962.1| general secretion pathway protein G [Ralstonia eutropha H16]
Length = 155
Score = 38.5 bits (88), Expect = 0.075
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+GV++A VV D + A Q ++S+ AL YP
Sbjct: 22 GFTLIEIMVVIVILGVLAALVVPKIMSRPDEARIVAARQDISSVMQALKLYRLDNSRYPT 81
Query: 85 TADATAA--SKLTSGLVS--------LGKISSDEAKNPFNGTN------MNIFSFPRNAA 128
T AA +K T+ V L K+ D +P+ N +++FSF +
Sbjct: 82 TEQGLAALVAKPTTEPVPNNWKGGGYLEKLPKDPWGHPYQYLNPGVRGEIDVFSFGADGQ 141
Query: 129 A 129
A
Sbjct: 142 A 142
>ref|YP_669814.1| putative type IV pilin protein precursor [Escherichia coli 536]
Length = 185
Score = 38.5 bits (88), Expect = 0.075
Identities = 27/136 (19%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G +LLE+++VLGI+ + + + SQ + ++ +IQ + Y ++
Sbjct: 11 KKGFSLLELLLVLGIIAALVVAAFIVYPKVQASQRAQAESNNIATIQAGVKALYTSASSF 70
Query: 83 PATADATAA-SKLTSGLVSLGKISSDEAKNPFNG-TNMNIFSFPRNAAANKAFAISVDGL 140
+ A +K+ + G ++ + N F G + + ++A +F I+ D +
Sbjct: 71 TGLTNTVAVQAKIFPDNMLSGSGTAAKPINAFKGNVTLAATATGPSSATGSSFTITYDNV 130
Query: 141 TQAQCKTLITSVGDMF 156
A+C + T+ F
Sbjct: 131 PAAECVKIATAAAGNF 146
>ref|YP_315051.1| tyep II secretion system protein G [Thiobacillus denitrificans ATCC
25259]
Length = 179
Score = 38.5 bits (88), Expect = 0.075
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++VL I+G+++ V I + A +++++ AL Q +G YPA
Sbjct: 50 GFTLLELLVVLVIIGLLAGYVGPKYFAQIGKSEVKTARAQIDALEKALDQYRLDVGRYPA 109
Query: 85 TADATAASKLTSGLVSLGKISSDEAK 110
T GL +L + DEAK
Sbjct: 110 T---------EQGLAALTERPQDEAK 126
>ref|NP_521227.1| PUTATIVE GENERAL SECRETION PATHWAY G TRANSMEMBRANE PROTEIN
[Ralstonia solanacearum GMI1000]
Length = 156
Score = 38.5 bits (88), Expect = 0.075
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+G+++A VV D + A Q + SI AL G YP
Sbjct: 22 GFTLIEIMVVVVILGILAALVVPKIMSRPDEARIIAAKQDIASISQALKLYRLDNGRYPT 81
Query: 85 TADATAA 91
T AA
Sbjct: 82 TEQGLAA 88
>ref|YP_338925.1| prepilin peptidase dependent protein D [Pseudoalteromonas
haloplanktis TAC125]
Length = 143
Score = 38.1 bits (87), Expect = 0.098
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVV----TLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG 78
Q+G TL+E++IV+ I+G+++A + T ++A S+++ A+ + I V QT RG
Sbjct: 9 QKGFTLIELMIVIAIIGILAAIALPQYQTYTKKARFSEVVLAASSAKGLIDVCF-QT-RG 66
Query: 79 LGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVD 138
G+ A D LT+G+ ++S K P +A +VD
Sbjct: 67 AGSL-ANCDTDKKIGLTAGVADGAHVASVVIK-------------PTDAEITATGESTVD 112
Query: 139 GLTQAQCKTLITSVGDM 155
G T T+ T+ G +
Sbjct: 113 GATYILTPTVSTNAGTL 129
>ref|YP_259859.1| type II secretion pathway protein XcpT [Pseudomonas fluorescens
Pf-5]
Length = 183
Score = 37.7 bits (86), Expect = 0.13
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ G TL+E+++V+ I+G+++A VV D T A Q + + AL G+
Sbjct: 49 GQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDIAGLMQALKLYRLDHGS 108
Query: 82 YP 83
YP
Sbjct: 109 YP 110
>ref|NP_273084.1| pilin PilE [Neisseria meningitidis MC58]
Length = 170
Score = 37.7 bits (86), Expect = 0.13
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E++IV+ I+G+++A + Q +++A + A+T+ Y G
Sbjct: 3 TLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHG 62
Query: 81 NYPATADATAASKLTSGLVSLGKISSDEAKN 111
+P + T+A TS + + S E KN
Sbjct: 63 EWP--GNNTSAGVATSSEIKGKYVKSVEVKN 91
>ref|YP_871281.1| methylation site containing protein [Shewanella sp. ANA-3]
Length = 169
Score = 37.7 bits (86), Expect = 0.13
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 15/119 (12%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN- 81
Q+G TL+E+++V+ I+G+++ VT A + I+ Q A +LN ++ +L +G +
Sbjct: 5 QQGFTLIELVVVIIILGILA---VTAAPKFINLQ-SDAYASTLNGVKASL----QGANSL 56
Query: 82 -YPATADATAASKLTSGLVSLGKISSDEAKN-PFNGTNMNIFSFPRNAAANKAFAISVD 138
Y A SK TS ++ K +SD + NG ++ + + AAA+ + +D
Sbjct: 57 VYSKAAIQGVESKATSSIIIDDKGNSDATDDVKVNG----VYGYLKQAAADMVLVLDLD 111
>ref|YP_274392.1| general secretion pathway protein GspG [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 149
Score = 37.7 bits (86), Expect = 0.13
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ+G TL+E+++V+ I+G+++A VV D A Q + + AL G
Sbjct: 15 GQDGFTLIEIMVVVVILGILAAVVVPRVLDRPDQARAAAARQDIAGLMQALKLYRLDHGT 74
Query: 82 YPATADATAA 91
YP A + A
Sbjct: 75 YPNQAQSLKA 84
>ref|YP_263546.1| probable pilus assembly protein major pilin PilA [Psychrobacter
arcticus 273-4]
Length = 137
Score = 37.7 bits (86), Expect = 0.13
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q T+ + +++ + ++G G Y
Sbjct: 4 QQGFTLIELMIVIAIIGILAAIAIPSYQAYTKKARFTEVVLAATTVRTNIDTCFQGRGKY 63
Query: 83 PAT-ADATAASKL-TSGLVSLGKISS 106
T D+ A L SG+ + ++S
Sbjct: 64 VLTNCDSIAEVSLNASGVTAANNVNS 89
>ref|NP_772659.1| probable general secretion pathway protein G precursor
[Bradyrhizobium japonicum USDA 110]
Length = 150
Score = 37.4 bits (85), Expect = 0.17
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G+ G TL+E+++V+ I+G++ A V + A + S AL Y LG
Sbjct: 16 GEAGFTLVEMLVVITIIGMIMALVGPRVLNYLSESKAKAAKIQIESFSSALDLYYLDLGR 75
Query: 82 YPATADATAA 91
YP + + AA
Sbjct: 76 YPTSNEGLAA 85
>ref|YP_437975.1| Tfp pilus assembly protein, major pilin PilA [Hahella chejuensis
KCTC 2396]
Length = 161
Score = 37.4 bits (85), Expect = 0.17
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q G TL+E++IV+ I+G++++ + Q + +T+A + ++ + + Y+ G
Sbjct: 4 TAQNGFTLIELMIVVAIIGILASIALPSYQVYVTRAQVTEAVTIVGELRDQVKEYYKYKG 63
Query: 81 NYP---ATADATAASKLTSGLV 99
++P A A A +KL V
Sbjct: 64 DFPTDNAAAGIPAPNKLLGNFV 85
>ref|YP_926251.1| prepilin-type cleavage/methylation [Shewanella amazonensis SB2B]
Length = 157
Score = 37.4 bits (85), Expect = 0.17
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 24 EGMTLLEVIIVLGIMGVVSA----GVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
+G TL+E++IV+ I+G+++A T QRA S+++ A + ++ V + QT
Sbjct: 11 KGFTLIELMIVVAIIGILAAIALPAYKTYTQRAKFSEVVLAATPAKTAVDVCV-QTGTSC 69
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNP 112
N + AAS L + VS+ D+ NP
Sbjct: 70 DNLQEDSTGWAASSLVTS-VSIDAQMIDDPANP 101
>ref|YP_123640.1| type II secretory pathway protein LspG [Legionella pneumophila
str. Paris]
Length = 140
Score = 37.4 bits (85), Expect = 0.17
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G +L+E+++V+ I+G++++ VV D KA Q + +IQ AL G+Y
Sbjct: 4 QKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSY 63
Query: 83 PAT 85
P T
Sbjct: 64 PTT 66
>ref|YP_126663.1| type II secretory pathway protein LspG [Legionella pneumophila
str. Lens]
Length = 140
Score = 37.4 bits (85), Expect = 0.17
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G +L+E+++V+ I+G++++ VV D KA Q + +IQ AL G+Y
Sbjct: 4 QKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSY 63
Query: 83 PAT 85
P T
Sbjct: 64 PTT 66
>ref|YP_154767.1| Type II secretory pathway component [Idiomarina loihiensis L2TR]
Length = 144
Score = 37.4 bits (85), Expect = 0.17
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 18/119 (15%)
Query: 25 GMTLLEVIIVLGIMGV--VSAGVVTLAQRAIDSQIMTKAAQS-LNSIQVALTQTYRGLGN 81
G TL+E+II+L I+G+ VSAG V SQ++ + A S L SIQ+ Q GN
Sbjct: 5 GFTLIELIIILVIIGILAVSAGPVFFDNSGTQSQVVRQRAMSILRSIQLQAMQD--TTGN 62
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVDGL 140
Y ++ S+ T G+ + ++ + N N T FSF + A I DGL
Sbjct: 63 Y-----SSVVSENTLGVPPFVENNNRQISNVDNVT----FSFSGSLPA----TIGFDGL 108
>ref|YP_095391.1| type II protein secretion LspG [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 140
Score = 37.4 bits (85), Expect = 0.17
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G +L+E+++V+ I+G++++ VV D KA Q + +IQ AL G+Y
Sbjct: 4 QKGFSLIEIMVVVVILGILASIVVPKIMGRPDEARKVKAKQDVLAIQNALDLYKLDNGSY 63
Query: 83 PAT 85
P T
Sbjct: 64 PTT 66
>ref|YP_065191.1| similar to prepilin peptidase dependent protein D [Precursor]
[Desulfotalea psychrophila LSv54]
Length = 151
Score = 37.0 bits (84), Expect = 0.22
Identities = 20/73 (27%), Positives = 39/73 (53%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q + A S++S++ A+ + G
Sbjct: 8 QQGFTLIELMIVVAIIGILAAVAIPQYQNYTIKAKVGNALTSVDSLKTAVAVCAQEAGGI 67
Query: 83 PATADATAASKLT 95
T + T A +T
Sbjct: 68 LTTCNTTTADTVT 80
>ref|YP_944541.1| hypothetical protein Ping_3255 [Psychromonas ingrahamii 37]
Length = 140
Score = 37.0 bits (84), Expect = 0.22
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TL+E++IV+ I+G+++A VV Q I + T A +L I +T G YP
Sbjct: 9 KGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERTSARQGGYP 68
>ref|YP_605805.1| periplasmic sensor signal transduction histidine kinase
[Deinococcus geothermalis DSM 11300]
Length = 453
Score = 37.0 bits (84), Expect = 0.22
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 26 MTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+ L+ ++ L ++ V+ GV+TL R++D Q T+ + +++ A +GLG P
Sbjct: 22 LALVYTLVALALVSVIGLGVMTLLLRSMDQQFQTRLEERADTLAEAFLAGRQGLGKSP 79
>ref|YP_615374.1| General secretion pathway protein G [Sphingopyxis alaskensis
RB2256]
Length = 163
Score = 37.0 bits (84), Expect = 0.22
Identities = 20/70 (28%), Positives = 38/70 (54%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G+ G TL E+++V+ I+G+++ V+ + D ++TKA + +++ AL Q
Sbjct: 26 GERGFTLTELMVVIFIIGLLATVVMINVLPSQDRAMVTKAKADIATLETALEQYRLDNLT 85
Query: 82 YPATADATAA 91
YP + D A
Sbjct: 86 YPTSTDGLNA 95
>ref|YP_632006.1| general secretion pathway protein G [Myxococcus xanthus DK 1622]
Length = 150
Score = 37.0 bits (84), Expect = 0.22
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+G+++A V ++ AA + +++ L Y G++P
Sbjct: 17 GFTLIEIMVVITILGLIAAAVGVSVMSNLEEAKQKTAALDIKTLETGLKLHYMKTGSFPE 76
Query: 85 T 85
T
Sbjct: 77 T 77
>ref|NP_863731.1| hypothetical protein-signal peptide and transmembrane prediction
[Rhodopirellula baltica SH 1]
Length = 413
Score = 36.6 bits (83), Expect = 0.29
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TLLE+++V G++G++ ++ Q A ++ + +L I + +TQ + G+
Sbjct: 7 RNGFTLLELLVVTGVIGILIGLLLPAVQAAREAARRMSCSNNLGQIALGVTQYHDAFGHL 66
Query: 83 PATADAT 89
P T
Sbjct: 67 PPHGTGT 73
>ref|NP_213294.1| general secretion pathway protein G [Aquifex aeolicus VF5]
Length = 133
Score = 36.6 bits (83), Expect = 0.29
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+EV++VL I+G+++A +V +D + L +++ AL Q G Y
Sbjct: 2 RRGFTLIEVLVVLIILGLLAALIVPKLTGRVDEARIESTKLQLKAVKNALEQFKLDNGFY 61
Query: 83 PATADATAA 91
P T A
Sbjct: 62 PTTEQGLKA 70
>ref|YP_049766.1| putative type IV pilin protein precursor [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 185
Score = 36.6 bits (83), Expect = 0.29
Identities = 30/142 (21%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G +LLE+I+V+G++ + V + + SQ +++ IQ Y + +Y
Sbjct: 10 KKGFSLLELILVMGVIAALVVAVFIVYPKVQASQRAEAEVKNIALIQAGTKSLYSAVSSY 69
Query: 83 PATADAT-AASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPR--NAAANKAFAISVDG 139
A T +K+ + ++ N + G N+++ S + A +F I+
Sbjct: 70 SGLAITTLVKAKVLPESIQKTSGAASSMVNVWKG-NISVSSADTGPSGAIGSSFIITYRS 128
Query: 140 LTQAQCKTLITSVGDMFPYIAI 161
+ +C L++S+ F I I
Sbjct: 129 VPAVECAKLVSSLSASFYSIEI 150
>ref|YP_965064.1| general secretion pathway protein G [Shewanella sp. W3-18-1]
Length = 144
Score = 36.6 bits (83), Expect = 0.29
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TLLEV++V+ I+G++++ VV D KA + +++ AL G Y
Sbjct: 7 QKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVY 66
Query: 83 PATADATAA 91
P T A
Sbjct: 67 PTTEQGLEA 75
>ref|YP_773322.1| general secretion pathway protein G [Burkholderia cepacia AMMD]
Length = 146
Score = 36.6 bits (83), Expect = 0.29
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
GQ+G TLLE+++VL I+ +++ V +D + + ++ A+TQ GN
Sbjct: 13 GQQGFTLLELLVVLLIIALLAGYVGPKLFSQVDKAKVKSTQAQMKTLGDAVTQFRLDTGN 72
Query: 82 YPATAD 87
YP TAD
Sbjct: 73 YP-TAD 77
>ref|YP_532871.1| General secretion pathway protein G [Rhodopseudomonas palustris
BisB18]
Length = 155
Score = 36.6 bits (83), Expect = 0.29
Identities = 19/71 (26%), Positives = 35/71 (49%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
TGQ G TL+E+++V+ I+G++ V + + A + S A+ Y G
Sbjct: 19 TGQAGFTLVEMLVVITIIGMIMGLVGPRVLNYLSESRVKAAKIQIQSFSSAMDLFYLDAG 78
Query: 81 NYPATADATAA 91
+P +++ AA
Sbjct: 79 RFPTSSEGLAA 89
>ref|YP_586835.1| secretory pathway pseudopilin PulG [Ralstonia metallidurans CH34]
Length = 145
Score = 36.6 bits (83), Expect = 0.29
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T + G TL+E+++V+ I+G++ + AID Q+L ++ A+ + Y G
Sbjct: 7 TWRRGFTLIEIVVVMAILGLLLTIALPRYLHAIDRGKEQVQRQNLAVMRDAIDKFYGDNG 66
Query: 81 NYPATAD 87
YP T D
Sbjct: 67 RYPETLD 73
>ref|NP_638446.1| pilin [Xanthomonas campestris pv. campestris str. ATCC 33913]
Length = 146
Score = 36.2 bits (82), Expect = 0.37
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E++IV+ I+ +++A + Q + +++ + + A+ +TY G +
Sbjct: 4 QNGFTLIELMIVVAIIAILAAIALPAYQDYLARSQVSEGLSLASGAKTAVAETYANTGAF 63
Query: 83 PAT 85
PAT
Sbjct: 64 PAT 66
>ref|YP_745588.1| general secretion pathway protein G [Granulibacter bethesdensis
CGDNIH1]
Length = 170
Score = 36.2 bits (82), Expect = 0.37
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+G++ R + + A Q++ I L +G+YP+
Sbjct: 37 GFTLIEMLVVIAILGILVGLAAPAVLRQLGGARQSVARQAVQRIGSVLDLYRLDMGSYPS 96
Query: 85 TADATAA 91
T+D A
Sbjct: 97 TSDGLGA 103
>ref|YP_605501.1| Fimbrial protein pilin [Deinococcus geothermalis DSM 11300]
Length = 129
Score = 36.2 bits (82), Expect = 0.37
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR-GLG 80
G +G TL+E++IV+ I+G+++A ++ A S AAQSL V ++YR G
Sbjct: 4 GTQGFTLIELLIVIAIIGILAAVLIPNLLNARKS-ANESAAQSLLRNAVTAAESYRTSSG 62
Query: 81 NYPATA-DATAASKL 94
Y TA D T A+ L
Sbjct: 63 TYLNTATDCTNANVL 77
>ref|YP_242148.1| pilin [Xanthomonas campestris pv. campestris str. 8004]
Length = 146
Score = 36.2 bits (82), Expect = 0.37
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E++IV+ I+ +++A + Q + +++ + + A+ +TY G +
Sbjct: 4 QNGFTLIELMIVVAIIAILAAIALPAYQDYLARSQVSEGLSLASGAKTAVAETYANTGAF 63
Query: 83 PAT 85
PAT
Sbjct: 64 PAT 66
>ref|YP_191420.1| General secretion protein G [Gluconobacter oxydans 621H]
Length = 148
Score = 36.2 bits (82), Expect = 0.37
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++VL I+ ++ V A R + ++ A QS+ + L +G+YP
Sbjct: 16 GFTLLEILVVLAILALLVGLVAPAALRQLGGARVSVARQSIARLGTVLDLYKLDVGSYPT 75
Query: 85 TADATAA 91
T + A
Sbjct: 76 TEEGLEA 82
>ref|YP_384811.1| N-terminal methylation [Geobacter metallireducens GS-15]
Length = 140
Score = 36.2 bits (82), Expect = 0.37
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T +G TL+E++IV+ I+G+++ V + ++ ++L SI+ ++ Q Y G
Sbjct: 9 TKSKGFTLVELMIVVTIIGILATIAVPSYKWSLIKAREAVLRENLYSIRSSIDQFYADQG 68
Query: 81 NYPATADATAASKLTSGL 98
YP T K GL
Sbjct: 69 KYPDTLQDLVDKKYIHGL 86
>ref|YP_560987.1| General secretion pathway protein G [Burkholderia xenovorans
LB400]
Length = 154
Score = 36.2 bits (82), Expect = 0.37
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + ++ AL G Y
Sbjct: 19 QRGFTLIEIMVVIAILGILAALIVPKIMSRPDEARRVAAKQDIGTVMQALKLYRLDNGRY 78
Query: 83 P 83
P
Sbjct: 79 P 79
>ref|YP_546527.1| General secretion pathway protein G [Methylobacillus flagellatus
KT]
Length = 142
Score = 36.2 bits (82), Expect = 0.37
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++VL I+G++ V + + A + +++ AL Q +G+Y
Sbjct: 11 QIGFTLLELLVVLVILGLLVGYVAPKYFAQLGKSEVKTARAQIGALEKALDQYRLDVGHY 70
Query: 83 PATADATAA 91
P T AA
Sbjct: 71 PTTEQGLAA 79
>ref|YP_159239.1| fimbrial protein precursor PilE (MS11 antigen) [Azoarcus sp. EbN1]
Length = 144
Score = 35.8 bits (81), Expect = 0.49
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + +T+A +L + + ++++ Y
Sbjct: 5 QQGFTLIELMIVVAIIGILAAVAIPAYTDYTARAKVTEAVGALAAAKTSVSEYYISEAVM 64
Query: 83 PATADATAASKLTSGLVS 100
P ADATAA T L S
Sbjct: 65 P--ADATAAGINTGALGS 80
>ref|YP_157025.1| class II pilin protein PilE [Azoarcus sp. EbN1]
Length = 144
Score = 35.8 bits (81), Expect = 0.49
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +++ + +VA+ +T++ G
Sbjct: 5 QQGFTLIELMIVVAIIGILAAVALPAYQDYTIRAQVSELMSLTDGAKVAVAETFQSTGAL 64
Query: 83 PATADATA 90
PA +DA A
Sbjct: 65 PA-SDAAA 71
>ref|YP_104299.1| general secretion pathway protein G [Burkholderia mallei ATCC
23344]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_286421.1| General secretion pathway protein G [Dechloromonas aromatica RCB]
Length = 156
Score = 35.8 bits (81), Expect = 0.49
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+G+++ V I + A +++++ AL Q +G Y
Sbjct: 25 QRGFTLLELLVVMVIIGLLAGYVGPKYFAQIGKSEVKAARAQIDALEKALDQYRLDVGRY 84
Query: 83 PATADATAA 91
P + + AA
Sbjct: 85 PTSENGLAA 93
>ref|YP_480321.1| Peptidoglycan glycosyltransferase [Frankia sp. CcI3]
Length = 729
Score = 35.8 bits (81), Expect = 0.49
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G +G+ LEV G V+ T+A + D ++ +++ ALT+T + LG
Sbjct: 217 GTDGVERLEV----DRFGRVAGTASTIAPLSGDHLVLNLDLDVQQAVEQALTETIKKLGG 272
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFNG----TNMNIFSFPRNAAANKAFAISV 137
P TA A T G++++ + S + + F+G ++ S P N + A
Sbjct: 273 GPRTASAVVLDVRTGGVIAMASLPSYD-PSVFSGGVSESDYRALSDPANGIPLLSRAYQG 331
Query: 138 DGLTQAQCKTLITSV 152
G + K + T+V
Sbjct: 332 SGPAGSTFKAISTAV 346
>ref|YP_607941.1| Probable type II secretion pathway protein G, transport across
outer membrane [Pseudomonas entomophila L48]
Length = 148
Score = 35.8 bits (81), Expect = 0.49
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E+++V+ I+G+++A VV D T A Q + + AL G Y
Sbjct: 15 QQGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDIAGLMQALKLYRLDNGGY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_771943.1| general secretion pathway protein G [Burkholderia cepacia AMMD]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_746747.1| general secretion pathway protein G [Nitrosomonas eutropha C91]
Length = 145
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/63 (30%), Positives = 36/63 (57%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TLLE+++V+ I+G+++A V + + A ++S++ AL Q +G Y
Sbjct: 14 ERGFTLLELLVVMVIIGLLAAYVGPKYFSQVGKSEIKMAQAQIDSLEKALHQYRLDVGTY 73
Query: 83 PAT 85
P+T
Sbjct: 74 PST 76
>ref|YP_833705.1| general secretion pathway protein G [Burkholderia cenocepacia
HI2424]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_619901.1| General secretion pathway protein G [Burkholderia cenocepacia AU
1054]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_331640.1| general secretion pathway protein G [Burkholderia pseudomallei
1710b]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_551455.1| methylation [Polaromonas sp. JS666]
Length = 169
Score = 35.8 bits (81), Expect = 0.49
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 16/137 (11%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q M++ + +S + ++T+T +
Sbjct: 6 QKGFTLIELMIVVAIIGILAAVALPAYQDYTKRAKMSEVILAASSCRTSITETIQS---- 61
Query: 83 PATADATAASKLTSGLVSLGK----ISSDE--AKNPFNGTNMNIFSFPRNAAANKAFAIS 136
A + +T A+ VS G ++S E A NP I +N A++ +
Sbjct: 62 -AASGSTIAANGWGCEVSTGSGTKYVASMETTANNPGAAGGAMITVTAQNIASD-----A 115
Query: 137 VDGLTQAQCKTLITSVG 153
G++ A C T T+ G
Sbjct: 116 NGGVSLAPCSTAATTFG 132
>ref|YP_106636.1| general secretory pathway protein G [Burkholderia pseudomallei
K96243]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_440571.1| general secretion pathway protein G [Burkholderia thailandensis
E264]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|YP_367486.1| General secretion pathway protein G [Burkholderia sp. 383]
Length = 150
Score = 35.8 bits (81), Expect = 0.49
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + +I AL G Y
Sbjct: 15 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRY 74
Query: 83 P 83
P
Sbjct: 75 P 75
>ref|NP_841650.1| Bacterial general secretion pathway protein G [Nitrosomonas
europaea ATCC 19718]
Length = 166
Score = 35.4 bits (80), Expect = 0.64
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TLLE+++V+ I+G+++A V + + A ++S++ AL Q +G Y
Sbjct: 35 ERGFTLLELLVVMVIIGLLAAYVGPKYFSQVGKSEVKMAQAQIDSLEKALHQYRLDVGTY 94
Query: 83 PAT 85
P T
Sbjct: 95 PTT 97
>ref|YP_347705.1| General secretion pathway protein G [Pseudomonas fluorescens PfO-1]
Length = 142
Score = 35.4 bits (80), Expect = 0.64
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQS-LNSIQVALTQTYRGLGN 81
Q G TLLE+++VL ++G++ AG+V A + K A++ + + AL +G+
Sbjct: 10 QRGFTLLELLVVLVVLGLL-AGIVAPKYFAQLGRSEVKVAKAQIEGLSKALDLYRLEVGH 68
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAK 110
YP+T GL +L SDEAK
Sbjct: 69 YPST---------EQGLQALVTAPSDEAK 88
>ref|YP_526826.1| hypothetical protein Sde_1352 [Saccharophagus degradans 2-40]
Length = 222
Score = 35.4 bits (80), Expect = 0.64
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+ IVL I+G++ GV+ I++ + KAA LN I A
Sbjct: 9 QSGFTLVEIAIVLVIIGLLLGGVLK-GTELIENSKVKKAANELNGISAAYNSYIDRYSRV 67
Query: 83 PATADATAASKLTSG 97
P AA + G
Sbjct: 68 PGDDGNLAALQARGG 82
>ref|YP_271235.1| general secretion pathway protein G [Colwellia psychrerythraea
34H]
Length = 143
Score = 35.4 bits (80), Expect = 0.64
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLEV++V+ I+G++++ VV + + M KA + +++ +L+ +YP
Sbjct: 7 QGFTLLEVMVVIVILGILASMVVPNLMGSQERANMQKAISDVTALETSLSLYKMDNYDYP 66
Query: 84 ATADATAA 91
+T A
Sbjct: 67 STEQGLEA 74
>ref|YP_271217.1| MSHA pilin protein MshA [Colwellia psychrerythraea 34H]
Length = 187
Score = 35.4 bits (80), Expect = 0.64
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 21/115 (18%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQ------SLNSIQVALTQTY 76
Q+G TL+E+++V+ I+G+++ VT A R ID Q + A S+ S++ +
Sbjct: 11 QKGFTLIELVVVIVILGILA---VTAAPRFIDVQDDARTATLDAIKGSIESVKALVHSKS 67
Query: 77 RGLGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNI-FSFPRNAAAN 130
GN T A AAS + + + + NG ++N+ F +PR+ A+
Sbjct: 68 LIAGN--ETVGAAAASGGAAAVTPVVVV---------NGVDVNVSFGYPRSNTAS 111
>ref|NP_283104.1| fimbrial protein precursor (pilin) [Neisseria meningitidis Z2491]
Length = 170
Score = 35.4 bits (80), Expect = 0.64
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E++IV+ I+G+++A + Q +++A + A+T+ Y G
Sbjct: 3 TLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHG 62
Query: 81 NYPATADATAASKLTSGLVSLGKISSDEAKN 111
+P ++ T+A +S + + S E KN
Sbjct: 63 EWP--SNNTSAGVASSTDIKGKYVQSVEVKN 91
>ref|YP_941932.1| methylation site containing protein [Psychromonas ingrahamii 37]
Length = 141
Score = 35.4 bits (80), Expect = 0.64
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVV----TLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG 78
Q+G TL+E++IV+ I+G+++A + Q+A S+++ + ++++V
Sbjct: 5 QQGFTLIELLIVIAIIGILAAVAIPSYNAYTQKAKFSELILATGATKSALEVCAQFNASA 64
Query: 79 LGNYPAT----ADATAASKLTSGLVSL 101
+G AT A A A +K+T+ V+L
Sbjct: 65 VGCTAATVAGVAAAAANAKITTVAVTL 91
>ref|YP_463895.1| hypothetical protein Adeh_0682 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 203
Score = 35.4 bits (80), Expect = 0.64
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQT 75
Q G TL+E++IV+G++G+++A VV A+ A + KAA L+ +L T
Sbjct: 7 QRGFTLIELLIVIGVIGLLAAMVVPAAESATGAN-ARKAAGELSGAMRSLYDT 58
>ref|YP_383702.1| N-terminal methylation [Geobacter metallireducens GS-15]
Length = 345
Score = 35.4 bits (80), Expect = 0.64
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTL--------AQRAIDSQIMTKAAQSLNSIQVALTQTY 76
G TL+EV++V+ I+ V+SAG+ T+ R ++ +A Q++N ++ L T
Sbjct: 15 GYTLVEVLVVIVILAVISAGLSTVFITGQKEYGVREATIRMQQQARQAMNEMERELKNTG 74
Query: 77 RGLGNYPATADATAASKLTSGLVSLGKI--SSDEAKNPFNGTNMNIFSFPRNAAANKAFA 134
GL + D T +SG + ++ +SD P ++ + + +
Sbjct: 75 YGLMD---MGDLTVKVYKSSGAIPSWQVVEASDGGTEP---DSIKVLYSGAESDVGYDYI 128
Query: 135 ISVDGLTQAQCKTLITSVGDMFP 157
+SVD T + L+++VG + P
Sbjct: 129 VSVDHPT-SSALMLVSAVGSVPP 150
>ref|NP_520422.1| PUTATIVE GSPG-RELATED PROTEIN [Ralstonia solanacearum GMI1000]
Length = 130
Score = 35.4 bits (80), Expect = 0.64
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+G++ + +I+ Q+L I+ A+ + Y G Y
Sbjct: 9 RRGFTLIELVVVMAIIGLLLTLALPRYFHSIERGRAQVQQQNLAVIRDAIDKYYGDNGQY 68
Query: 83 PATADATAASKLTSGL 98
P T D A + G+
Sbjct: 69 PDTLDDLVAKRYLRGI 84
>ref|NP_815655.1| ATPase, AAA family [Enterococcus faecalis V583]
Length = 425
Score = 35.0 bits (79), Expect = 0.83
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 67 SIQVALTQTYRGLGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRN 126
+IQ ALT + RGLG+YP + A LT + ++ + ++ NG + + S P+N
Sbjct: 158 AIQEALTDSTRGLGDYPVHLEEKALQHLT-------RATNGDLRSALNGLELAVKSTPKN 210
>ref|NP_251791.1| general secretion pathway protein G [Pseudomonas aeruginosa PAO1]
Length = 148
Score = 35.0 bits (79), Expect = 0.83
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A VV D +T A + +I AL Y
Sbjct: 12 QSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAY 71
Query: 83 PATADATAA 91
P+T A
Sbjct: 72 PSTQQGLEA 80
>ref|YP_790072.1| general secretion pathway protein G [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 148
Score = 35.0 bits (79), Expect = 0.83
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A VV D +T A + +I AL Y
Sbjct: 12 QSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAY 71
Query: 83 PATADATAA 91
P+T A
Sbjct: 72 PSTQQGLEA 80
>ref|YP_743221.1| general secretion pathway protein G [Alkalilimnicola ehrlichei
MLHE-1]
Length = 144
Score = 35.0 bits (79), Expect = 0.83
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++ VV D ++KA + +I+ AL Y
Sbjct: 7 QSGFTLIEIMVVVVILGILAGIVVPRIMDRPDDARISKARSDIRAIESALNLYRLDNNVY 66
Query: 83 PAT 85
P+T
Sbjct: 67 PST 69
>ref|YP_662790.1| general secretion pathway protein G [Pseudoalteromonas atlantica
T6c]
Length = 139
Score = 35.0 bits (79), Expect = 0.83
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR-GLGN 81
Q+G T++E+++VL I+G+++ V +DS + A + +++A+ QTYR +G
Sbjct: 6 QQGFTMIELLVVLVILGLLAGLVGPQFFGKVDSAKVRTAETQVKMLKMAI-QTYRLDVGT 64
Query: 82 YPAT 85
YP++
Sbjct: 65 YPSS 68
>ref|YP_561144.1| General secretion pathway protein G [Shewanella denitrificans
OS217]
Length = 144
Score = 35.0 bits (79), Expect = 0.83
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TLLEV++V+ I+G++++ VV D KA + +++ AL Y
Sbjct: 7 QQGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNSYY 66
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKN 111
P T A LV+ SS EA+N
Sbjct: 67 PTTDQGLDA------LVN-APTSSPEARN 88
>ref|YP_552008.1| methylation [Polaromonas sp. JS666]
Length = 547
Score = 35.0 bits (79), Expect = 0.83
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 18/93 (19%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLN---------------S 67
Q G+TLLEVI+ L I+ S G+ +A + + +T AA + S
Sbjct: 10 QRGLTLLEVIVSLAIVSSASIGLYAVADQFSNDTKVTVAASQVRAFGDAARAYIKDNYAS 69
Query: 68 IQVALTQTYRGLGNYPATADATAASKLTSGLVS 100
IQ T T L + P AA LT+G +S
Sbjct: 70 IQAVATPTTPALIDVPT---LIAAGNLTTGFLS 99
>ref|YP_586836.1| secretory pathway pseudopilin PulG [Ralstonia metallidurans CH34]
Length = 176
Score = 35.0 bits (79), Expect = 0.83
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 28/128 (21%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVAL--------- 72
G G TL+E+++ L ++G+V+ V+ ++ + Q + +L I+ AL
Sbjct: 20 GGRGFTLIELVVTLALVGIVALAVLPFSELIVQRQKEQELRVALREIRTALDAYKEASDF 79
Query: 73 --TQTYRGLGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAAN 130
+ + YP T D L +G+V +AK+P G + F R +
Sbjct: 80 GSIEKKADMSGYPPTLDV-----LATGVV--------DAKDPKGG----LLQFLRRVPRD 122
Query: 131 KAFAISVD 138
+A VD
Sbjct: 123 PFYAGDVD 130
>ref|YP_933593.1| general secretion pathway protein G [Azoarcus sp. BH72]
Length = 158
Score = 34.7 bits (78), Expect = 1.1
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 15/68 (22%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTL----AQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
G TL+E+++ + I+GV+ AG V L AQR+ ++++ T AL Q +
Sbjct: 7 GFTLIELVVTVAIIGVLVAGAVPLLELGAQRSREAELRT-----------ALRQIRTAID 55
Query: 81 NYPATADA 88
Y A ADA
Sbjct: 56 AYKAAADA 63
>ref|YP_736217.1| general secretion pathway protein G [Shewanella sp. MR-7]
Length = 144
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLEV++V+ I+G++++ VV D KA + +++ AL G YP
Sbjct: 8 KGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGIYP 67
Query: 84 ATADATAA 91
T A
Sbjct: 68 TTEQGLEA 75
>ref|YP_732297.1| general secretion pathway protein G [Shewanella sp. MR-4]
Length = 144
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLEV++V+ I+G++++ VV D KA + +++ AL G YP
Sbjct: 8 KGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGIYP 67
Query: 84 ATADATAA 91
T A
Sbjct: 68 TTEQGLEA 75
>ref|YP_890666.1| [NADP+] succinate-semialdehyde dehydrogenase [Mycobacterium
smegmatis str. MC2 155]
Length = 450
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 57 IMTKAAQSLNSIQVALTQTYRGLGNYPATAD----ATAASKLTSGLVSLGKISSDEAKNP 112
++ KA ++Q+A T GLG+Y T D A A K+ +G+V + + ++ A+ P
Sbjct: 361 VVYKAGSEEEAVQIA-NDTPFGLGSYVFTTDSEQAARVADKIEAGMVFVNAVGAEGAELP 419
Query: 113 FNGTNMNIF 121
F G + F
Sbjct: 420 FGGVKRSGF 428
>ref|NP_870701.1| hypothetical protein RB12783 [Rhodopirellula baltica SH 1]
Length = 435
Score = 34.7 bits (78), Expect = 1.1
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T + TL+E+++V+GI+G++SA ++ AI + T ++ I AL G
Sbjct: 16 TTRSAFTLVEMLVVIGIIGILSAILIPAITGAIGTARDTAIRMEVDVIDQALAAYNLKYG 75
Query: 81 NYP 83
+YP
Sbjct: 76 DYP 78
>ref|YP_051196.1| general secretion pathway protein G [Erwinia carotovora subsp.
atroseptica SCRI1043]
Length = 146
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/69 (30%), Positives = 34/69 (49%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+GV+++ VV + KA + S++ AL Y
Sbjct: 10 QRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADKQKAVSDIVSLESALDMYKLDNNRY 69
Query: 83 PATADATAA 91
P+T A
Sbjct: 70 PSTEQGLKA 78
>ref|NP_760356.1| MSHA pilin protein MshA [Vibrio vulnificus CMCP6]
Length = 151
Score = 34.7 bits (78), Expect = 1.1
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 18/107 (16%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++ +T A + LN A + +GL
Sbjct: 4 QGGFTLIELVVVIVILGILA---------------VTAAPRFLNLQDDARSSALQGLKGA 48
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMN-IFSFPRNAA 128
A A K + + L ISS + + NG N+N +F +P +A
Sbjct: 49 MAGAAGIVYGK--AAIEGLEAISSGRSISGANGNNINLVFGYPEASA 93
>ref|NP_715811.1| general secretion pathway protein G [Shewanella oneidensis MR-1]
Length = 144
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLEV++V+ I+G++++ VV D KA + +++ AL G YP
Sbjct: 8 KGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVYP 67
Query: 84 ATADATAA 91
T A
Sbjct: 68 TTEQGLEA 75
>ref|NP_935571.1| type IV pilin PilA [Vibrio vulnificus YJ016]
Length = 160
Score = 34.7 bits (78), Expect = 1.1
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQT----YRG 78
Q+G TL+E++IV+GI+G++SA LA A S ++ A + I L +
Sbjct: 11 QQGFTLIELMIVVGIIGILSA----LAVPAYKSYVIKTEANTAVGIPRTLLSNIDLYIQE 66
Query: 79 LGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAFAISVD 138
G +P TA+ T G + + NGT + S + + NK +
Sbjct: 67 KGAFPETANIADVGGATDMSALGGLALTKDGTTATNGTLIFTISNGQASLNNKKITYTRT 126
Query: 139 G 139
G
Sbjct: 127 G 127
>ref|YP_065188.1| similar to fimbrial protein [Precursor] [Desulfotalea psychrophila
LSv54]
Length = 142
Score = 34.7 bits (78), Expect = 1.1
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +T+ + + A+++ Y+
Sbjct: 8 QQGFTLIELMIVVAIIGILAAVAIPQYQNYTKRAKVTEGLNMAGAAKTAVSEYYQSQNVL 67
Query: 83 PATADATAASKLTSGLV-SLG 102
P + S + + +V SLG
Sbjct: 68 PTSLAEAGISTVDTDIVKSLG 88
>ref|YP_271092.1| type IV pilin [Colwellia psychrerythraea 34H]
Length = 160
Score = 34.7 bits (78), Expect = 1.1
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 15/106 (14%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVV----TLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG 78
Q+G TL+E++IV+ I+G+++A + T A +A ++++ A + ++ + + G
Sbjct: 12 QKGFTLIELMIVVAIIGILAAVALPAYKTYADKAKFTEVVLSATAAKTAVDLCIQTGKGG 71
Query: 79 L--GNYPATADATAASKLT---------SGLVSLGKISSDEAKNPF 113
L PAT AA T SG+V+ KIS P+
Sbjct: 72 LVSSTTPATMLLEAAKCETIPDVTGWSQSGMVTSVKISGTTLVGPY 117
>ref|YP_867804.1| general secretion pathway protein G [Shewanella sp. ANA-3]
Length = 144
Score = 34.7 bits (78), Expect = 1.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLEV++V+ I+G++++ VV D KA + +++ AL G YP
Sbjct: 8 KGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNGVYP 67
Query: 84 ATADATAA 91
T A
Sbjct: 68 TTEQGLEA 75
>ref|YP_958045.1| type II secretory pathway, pseudopilin PulG [Marinobacter aquaeolei
VT8]
Length = 142
Score = 34.7 bits (78), Expect = 1.1
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 15/140 (10%)
Query: 25 GMTLLEVIIVLGIMGVVSA-GVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
G TL+E+++V+ ++GV+S GV A R+ S ++ AAQ LNS + Q
Sbjct: 4 GFTLVELVMVIILIGVLSVLGVGLFANRSAFSPLL--AAQQLNSAALLARQAAMAGNEND 61
Query: 84 ATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNI-------FSFPRNAAANKAFAIS 136
+ S T + S+G S P GT + + F +N A +
Sbjct: 62 TVTVSDGGSSFTYSVGSIGSWSI-----PKEGTELTVPGGLPLDIQFNKNGAPVSGKNLE 116
Query: 137 VDGLTQAQCKTLITSVGDMF 156
+ + ++ ++S+G ++
Sbjct: 117 LSFIGDSRYDICVSSLGAVY 136
>ref|YP_902077.1| type II secretion system protein G [Pelobacter propionicus DSM
2379]
Length = 149
Score = 34.7 bits (78), Expect = 1.1
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E++IV+ I+G+++A V Q ++ + L +++ + Q Y G YP
Sbjct: 7 GFTLIELMIVVSIIGILAAIAVPHYQWSVIKAREAVLREDLYNLRSVIDQFYADQGKYP- 65
Query: 85 TADATAASKLTSGLVSLGKISSDEAKNPFNGTN 117
LT +S + D K+PF G N
Sbjct: 66 -------DALTD--LSDKRYLRDIPKDPFTGKN 89
>ref|YP_371831.1| General secretion pathway protein G [Burkholderia sp. 383]
Length = 155
Score = 34.7 bits (78), Expect = 1.1
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A +V D A Q + ++ +L G Y
Sbjct: 20 QRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTMMQSLNLYRLDNGRY 79
Query: 83 PATADATAA 91
P+ A
Sbjct: 80 PSQEQGLTA 88
>ref|YP_735602.1| methylation site containing protein [Shewanella sp. MR-4]
Length = 169
Score = 34.3 bits (77), Expect = 1.4
Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN- 81
Q+G TL+E+++V+ I+G+++ VT A + I+ Q A +LN ++ +L +G +
Sbjct: 5 QQGFTLIELVVVIIILGILA---VTAAPKFINLQ-SDAYASTLNGVKASL----QGANSL 56
Query: 82 -YPATADATAASKLTSGLVSLGKISSDEAKN-PFNGTNMNIFSFPRNAAANKAFAISVD 138
Y A SK S ++ K +SD + NG ++ + + AAA+ + +D
Sbjct: 57 VYSKAAIQGVESKDESSIIIDDKGNSDATDDVKVNG----VYGYLKQAAADMVLVLDLD 111
>ref|NP_760518.1| Type IV pilin PilA [Vibrio vulnificus CMCP6]
Length = 148
Score = 34.3 bits (77), Expect = 1.4
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSI--QVALTQTYRGLG 80
Q+G TL+E++IV+ I+GV++A + Q + + A+ ++ + + + Q G G
Sbjct: 11 QQGFTLIELMIVVAIIGVLAAVAIPAYQNYVQKTEVASASATVRGLLTNIDMYQQENG-G 69
Query: 81 NYPATADATAASKLTSGLVSLGKIS 105
+P A+ TS + +LG I+
Sbjct: 70 TFPNNANLVGG---TSTMNALGTIT 91
>ref|YP_347721.1| hypothetical protein Pfl_1989 [Pseudomonas fluorescens PfO-1]
Length = 124
Score = 34.3 bits (77), Expect = 1.4
Identities = 17/61 (27%), Positives = 34/61 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G TLLE+++V+ I+ + + ++++ T QSL++++ AL Y G Y
Sbjct: 4 EKGFTLLELMVVMAIIATLMTIALPRYFNSLEASKETTLHQSLSAMREALDHYYGDTGRY 63
Query: 83 P 83
P
Sbjct: 64 P 64
>ref|NP_642979.1| pre-pilin leader sequence [Xanthomonas axonopodis pv. citri str.
306]
Length = 155
Score = 34.3 bits (77), Expect = 1.4
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID--------SQIMTKAAQSLNSIQVALTQ 74
Q G++L+EV+I + I+G+ G+ + RA+ SQ++ ++ L++++ LT
Sbjct: 12 QAGVSLIEVLISVVILGIGMLGIAAMQARALQNNSSSLERSQMVVQSYAILDAMRANLTA 71
Query: 75 TYRGLGNYPATADATAASKLTS 96
G N T + A L +
Sbjct: 72 ARAGAYNTAMTCNVPAGGNLAA 93
>ref|YP_972988.1| Tfp pilus assembly protein major pilin PilA [Acidovorax avenae
subsp. citrulli AAC00-1]
Length = 168
Score = 34.3 bits (77), Expect = 1.4
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E++IV+ I+G+++A + Q M++ + +S + +T+ Y+
Sbjct: 4 TVQQGFTLIELMIVVAIIGILAAVALPAYQDYTKKAKMSEVILAASSCRTTITEIYQS-- 61
Query: 81 NYPATADATAAS 92
ATA + A+
Sbjct: 62 ---ATASSPPAA 70
>ref|YP_436376.1| Tfp pilus assembly protein, major pilin PilA [Hahella chejuensis
KCTC 2396]
Length = 157
Score = 34.3 bits (77), Expect = 1.4
Identities = 17/78 (21%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q I +++A ++++ ++ + ++
Sbjct: 5 QKGFTLIELMIVVAIIGILAAVAIPAYQDYIARSQVSEAVSLTSAVKGSMAEAFQNTAVR 64
Query: 83 PATAD--ATAASKLTSGL 98
P + A + K +G+
Sbjct: 65 PGLGEVGAVTSGKYVAGM 82
>ref|YP_357553.1| pilus-related protein, putative [Pelobacter carbinolicus DSM 2380]
Length = 196
Score = 34.3 bits (77), Expect = 1.4
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVV----TLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG 78
++G TL+E++IV+ I+G+++A + QRA +S +T +L + A ++
Sbjct: 9 EKGFTLIELLIVVAIIGILAAIAIPQFAAYRQRAFNSAALTD-INNLQKSEAAFFTDWQV 67
Query: 79 LGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKA 132
G+ A A A + T+ + G I P NG N+ NA + +A
Sbjct: 68 FGHSAAAAAGAAPNAATA--ANAGAI----VTGPDNGVAGNVIWVTGNAQSLQA 115
>ref|NP_518678.1| PROBABLE TYPE 4 FIMBRIAL PILIN SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum GMI1000]
Length = 173
Score = 34.3 bits (77), Expect = 1.4
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVV------TLAQRAIDSQIMTKAAQSLNSIQVALTQT 75
GQ G TL+E++IV+ I+G+++A + T+ R ++ + A++L A Q+
Sbjct: 12 GQRGFTLIELMIVVAIIGILAALAIPAYQDYTIRSRVVEGLALAGQAKALVVENAANAQS 71
Query: 76 YRGLG--NYPATADATA 90
LG + PA+ + +A
Sbjct: 72 SLSLGSASLPASKNVSA 88
>ref|YP_462277.1| general secretion pathway protein G [Syntrophus aciditrophicus SB]
Length = 148
Score = 33.9 bits (76), Expect = 1.9
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 12/102 (11%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TL+E+++VL I+G+++ +V + K ++ + AL G YP
Sbjct: 10 KGFTLIELMVVLVILGILAGLIVPRMMGRTEDAKRVKTRLQIDGLGAALKLYKLDNGVYP 69
Query: 84 AT---ADATAASKLT---------SGLVSLGKISSDEAKNPF 113
T +A AS T G + KI SD NPF
Sbjct: 70 TTEQGLEALVASPKTGTPPRAWREGGYLEKKKIPSDGWGNPF 111
>ref|NP_294958.1| hypothetical protein DR1234 [Deinococcus radiodurans R1]
Length = 293
Score = 33.9 bits (76), Expect = 1.9
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 20/112 (17%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRA--IDSQIMTKA---AQSLNSIQVALTQTYRG 78
EG TL+E+++ L ++G+V + +VT + + +Q ++A + LN+ Q+ + +
Sbjct: 11 EGFTLVELLVALALLGIVLSALVTFFSQGSRVSTQSSSRAELQQEVLNAQQLIVGKLKEA 70
Query: 79 LGNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAAN 130
YPA S TS +++ +NP GT PR AN
Sbjct: 71 WYIYPAGQTLQLGSSSTS--------TANLRQNPVTGT-------PRGGFAN 107
>ref|YP_826937.1| Tfp pilus assembly protein PilE-like protein [Solibacter usitatus
Ellin6076]
Length = 288
Score = 33.9 bits (76), Expect = 1.9
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++V+ I+GV+ ++ Q+ D+ +A L I A + + Y
Sbjct: 6 GFTLIELLVVIAIIGVLVGLLIPAVQQVRDAAARLQAQNDLVKIATAESAYFAQNHAYTG 65
Query: 85 TADATAASKLTSGLVS 100
T A A+ L + + S
Sbjct: 66 TLGALASFGLAAAIAS 81
>ref|NP_798902.1| type IV pilin PilA [Vibrio parahaemolyticus RIMD 2210633]
Length = 139
Score = 33.9 bits (76), Expect = 1.9
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSI-----------QVA 71
Q+G TL+E++IV+ I+GV++A + Q + +T ++ ++ +A
Sbjct: 9 QQGFTLIELMIVVAIIGVLAAAAIPAYQNYVTRSEVTSGLATVKALITPAELHYQENGIA 68
Query: 72 LTQTYRGLGNYPATADATAA-SKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAAN 130
T LG A D A S L G +L + +A + +G I +F R+AA
Sbjct: 69 AAATLAQLGVDVAANDLGAIDSALAGGSPTL--TFTFDADSSIDG---GILTFTRDAATG 123
Query: 131 -----KAFAISVDG 139
A AI+VDG
Sbjct: 124 WSCLPTAPAIAVDG 137
>ref|YP_413271.1| General secretion pathway protein G [Nitrosospira multiformis
ATCC 25196]
Length = 154
Score = 33.9 bits (76), Expect = 1.9
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++V+ I+G+++ V + + A ++S++ AL Q G+YP
Sbjct: 25 GFTLLELLVVMVIIGLLAGYVAPKYFSQVGKSEVKVAQAQIDSLEKALDQYRLDTGHYPT 84
Query: 85 TADATAA 91
AA
Sbjct: 85 PEQGLAA 91
>ref|YP_344258.1| putative type-4 fimbrial pilin related signal peptide protein
[Nitrosococcus oceani ATCC 19707]
Length = 187
Score = 33.9 bits (76), Expect = 1.9
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAI-DSQIMTKAAQSLNSIQVALTQTYRGLG 80
G G TL E+II L I G+++ V Q AI +++I T+A + + ++ A ++ +
Sbjct: 11 GTNGFTLAELIITLAIAGIITTMAVPSFQGAIRNNRISTQANEFITALHSARSEAVKRRQ 70
Query: 81 NYP--ATADATAASKLTSGLVSLG 102
+A++TAAS + + S G
Sbjct: 71 RITICKSANSTAASPACNTVNSTG 94
>ref|YP_561145.1| General secretion pathway protein H [Shewanella denitrificans
OS217]
Length = 195
Score = 33.9 bits (76), Expect = 1.9
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGV-VTLAQRAIDSQIMTKAAQSLNSIQVALTQT 75
Q G TLLEV++V +MG+ +A V +T+ + ++ A Q + + +V L +T
Sbjct: 6 QRGFTLLEVLLVALLMGLTAAAVTMTMGDAGPEKELKRAAQQFIAATEVVLDET 59
>ref|YP_390523.1| General secretion pathway protein G [Thiomicrospira crunogena
XCL-2]
Length = 150
Score = 33.9 bits (76), Expect = 1.9
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E+++V+ I+ +++A V D + KA Q ++S+ AL Q Y+ L NY
Sbjct: 16 QQGFTLIELMVVVVILAILAAIAVPQFMDRPDEARIVKAKQDISSLSSAL-QLYK-LDNY 73
>ref|YP_124207.1| hypothetical protein lpp1890 [Legionella pneumophila str. Paris]
Length = 136
Score = 33.9 bits (76), Expect = 1.9
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +T+ +S ++A+++T
Sbjct: 3 QKGFTLIELMIVVAIIGILAAIAIPAYQDYTIRARVTEGLTLADSAKLAVSETAITNNAL 62
Query: 83 PATADAT 89
PAT AT
Sbjct: 63 PATQAAT 69
>ref|YP_548169.1| General secretion pathway protein G [Polaromonas sp. JS666]
Length = 158
Score = 33.9 bits (76), Expect = 1.9
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVV-TLAQRAIDSQIMTKAAQSLNSIQVAL 72
Q G TL+E+++VL I+GV++A +V + RA D+++M A +N++ AL
Sbjct: 25 QAGFTLIELMVVLVIIGVLAALIVPNVLDRADDARVMA-ARTDVNNLSQAL 74
>ref|YP_546519.1| methylation [Methylobacillus flagellatus KT]
Length = 157
Score = 33.9 bits (76), Expect = 1.9
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL--G 80
Q G TL+E+++ L I+ ++++ ++ L Q ++ Q + Q+L I+ A+ + + G
Sbjct: 4 QAGFTLIELVVTLTIVSILASALIPLGQWSVKRQQEAELRQALRDIRSAIDAYKKAVEEG 63
Query: 81 NYPATADAT 89
ADA+
Sbjct: 64 KIIVNADAS 72
>ref|YP_273019.1| pre-pilin leader sequence [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 171
Score = 33.9 bits (76), Expect = 1.9
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 23 QEGMTLLEVIIVLGIM--GVVSAGVVTL-AQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
Q GMTL+EV++ + I+ G++ A + L A + DS MT A +A R
Sbjct: 9 QTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASF-----IAYDMMDRIR 63
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRN 126
N A A ++ + + +L +++++ NP + +++ F N
Sbjct: 64 ANVDGNASANGSTNVLAN-YALASLATEQVANPNDARVQDLYDFKTN 109
>ref|YP_159819.1| general secretory pathway protein G [Azoarcus sp. EbN1]
Length = 147
Score = 33.5 bits (75), Expect = 2.4
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVAL 72
+ G TL+EV+IV+ I+GV++A VV D + A Q + S+ AL
Sbjct: 13 RRGFTLIEVMIVIVILGVLAALVVPRVMSRPDEARVVAAKQDIASLMQAL 62
>ref|NP_230065.1| MSHA pilin protein MshD [Vibrio cholerae O1 biovar eltor str.
N16961]
Length = 203
Score = 33.5 bits (75), Expect = 2.4
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVT----LAQRAIDSQIMTKAAQSLNSI-----QVALT 73
+ G TL+E+IIV+ ++GV GV T ++++ + + KAA+ ++ A
Sbjct: 23 KRGFTLVEMIIVIVVLGVALVGVTTSLYPRSKQSAEQVLSVKAAELGRAVLDEVLGRAFD 82
Query: 74 QTYRGLGNYP-ATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFP 124
Q G P TA L S +LGK + + FN + I S P
Sbjct: 83 QHSGPNGGLPECVITETAGRTLCSAPSALGKDTGESNNTEFNDVDDYITSSP 134
>ref|NP_294271.1| pilin, type IV, putative [Deinococcus radiodurans R1]
Length = 314
Score = 33.5 bits (75), Expect = 2.4
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 24 EGMTLLEVIIVLGIMGVVSA----GVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
+G TL+E++IV+ I+G+++A ++ +A DS + +++VA RG
Sbjct: 162 QGFTLIELLIVIAIIGILAAVLIPNLLGARAKANDSATQSYIRNCYTAVEVA-----RGA 216
Query: 80 -GNYPATADATAASKL-TSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNAAANKAF 133
G PA + + + L T+ + + G I++ A + +GT F+ + NK F
Sbjct: 217 DGRLPAAGNCDSTANLGTNAVATPGAITAAGAYS-LDGTGSK-FAVTATSVTNKTF 270
>ref|YP_745579.1| general secretion pathway protein H [Granulibacter bethesdensis
CGDNIH1]
Length = 155
Score = 33.5 bits (75), Expect = 2.4
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 12/135 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQ-------- 74
Q G TLLE+++VL I+G V G+ L I + + A +I+ L +
Sbjct: 12 QAGFTLLEMLVVLAILG-VGTGIALLYGTRIPEGLKARDAARAIAIEFRLARSQAIWSGH 70
Query: 75 TYRGLGNYP-ATADATAASKLTSGLVSLGKISSD-EAKNPFNGTNMNIFSFPRNAAANKA 132
T R N AT A + V+L ++S D EA + T + + P A
Sbjct: 71 TVRVTANLDHATLQRDNAMPVQLRGVTLHRLSQDSEAAKQGDDTQVTLLFLPHGGAKGDG 130
Query: 133 FAISVDGLTQAQCKT 147
+S G T +T
Sbjct: 131 LVVSA-GSTSINVRT 144
>ref|YP_610119.1| type IV pili prepilin PilA [Pseudomonas entomophila L48]
Length = 136
Score = 33.5 bits (75), Expect = 2.4
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 17/109 (15%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALT-------- 73
GQ G+TL+E++IV+ I+G+++ + + + Q KAA +L I T
Sbjct: 3 GQRGITLIELMIVVAIIGILATIAIPM---YTNHQARAKAAAALLEISALKTPMDIRLNE 59
Query: 74 ----QTYRGLGNYPATADA--TAASKLTSGLVSLGKISSDEAKNPFNGT 116
LG PAT TA+ G S+ +D N T
Sbjct: 60 GKDVPDVASLGGQPATTHCAITASGTAADGTASIACTLADAPANVLGKT 108
>ref|YP_521816.1| General secretion pathway protein G [Rhodoferax ferrireducens
T118]
Length = 147
Score = 33.5 bits (75), Expect = 2.4
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++VL I+GV++A +V D +T A +N++ AL Y
Sbjct: 13 QAGFTLIELMVVLLIIGVLAALIVPNVLDRADDARVTAAKTDVNNLMQALKLYRLDNQRY 72
Query: 83 PATADATAASKLT 95
P TA+ + LT
Sbjct: 73 P-TAEQGLQALLT 84
>ref|YP_748809.1| general secretion pathway protein G [Shewanella frigidimarina
NCIMB 400]
Length = 144
Score = 33.5 bits (75), Expect = 2.4
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLEV++V+ I+G++++ VV D KA + +++ AL Y
Sbjct: 7 QRGFTLLEVMVVIVILGILASMVVPNLMGNKDKADQQKAVSDIVALENALDMYKLDNSIY 66
Query: 83 PAT 85
P T
Sbjct: 67 PTT 69
>ref|NP_521703.1| PUTATIVE GENERAL SECRETION PATHWAY GSPG RELATED TRANSMEMBRANE
PROTEIN [Ralstonia solanacearum GMI1000]
Length = 172
Score = 33.5 bits (75), Expect = 2.4
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG--LGN 81
+G TL+E+++ L I+GV++ V +AQ ++ + +L I+ A+ R G
Sbjct: 20 QGFTLIELLVTLAILGVLALIAVPVAQVSMQRTREQELRLALREIRSAIDAYKRAGDEGR 79
Query: 82 YPATADATAASKLTSGLVS 100
P A AT K LVS
Sbjct: 80 IPREAGATGYPKQLGVLVS 98
>ref|ZP_00415597.1| Fimbrial protein pilin [Azotobacter vinelandii AvOP]
Length = 189
Score = 33.1 bits (74), Expect = 3.2
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++A + Q +++ + +S ++A+T+ +
Sbjct: 30 QNGFTLIELMMVVAIIGILAAVALPAYQDYTARAKVSEVVLAASSCRIAITEASQIGFAA 89
Query: 83 PATADATAASKLTSG 97
ATAD + SG
Sbjct: 90 DATADGFGCGETASG 104
>ref|NP_418981.1| hypothetical protein CC0162 [Caulobacter crescentus CB15]
Length = 208
Score = 33.1 bits (74), Expect = 3.2
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 39 GVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPATADATAAS 92
GVVSAGV A+ Q+ T AQS ++Q L QT N AT TAA+
Sbjct: 109 GVVSAGVAVQVAAAVAPQVATTVAQS-PAVQTQLAQT-----NQTATVTTTAAT 156
>ref|NP_742795.1| type IV pili prepilin PilA [Pseudomonas putida KT2440]
Length = 136
Score = 33.1 bits (74), Expect = 3.2
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALT-------- 73
GQ G+TL+E++IV+ I+G+++ + + + Q +KAA L I T
Sbjct: 3 GQRGITLIELMIVVAIIGILATIALPM---YTNHQARSKAAAGLLEISALKTAMDLRLND 59
Query: 74 ----QTYRGLGNYPATADA--TAASKLTSGLVSL 101
LG PATA TA+ K G S+
Sbjct: 60 GKDVADVAALGGQPATAHCAITASGKAADGSGSI 93
>ref|YP_436375.1| Tfp pilus assembly protein, major pilin PilA [Hahella chejuensis
KCTC 2396]
Length = 148
Score = 33.1 bits (74), Expect = 3.2
Identities = 16/70 (22%), Positives = 39/70 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G TL+E+I+V+ I+GV++A + + +++A ++V + + + G
Sbjct: 5 EKGFTLVELIVVVAIIGVIAAVAIPGYTDYVAKGQVSEAITLTEGLKVKVVEFVQNNGRP 64
Query: 83 PATADATAAS 92
P+T++ +S
Sbjct: 65 PSTSEVVGSS 74
>ref|YP_435080.1| general secretion pathway protein G [Hahella chejuensis KCTC
2396]
Length = 149
Score = 33.1 bits (74), Expect = 3.2
Identities = 19/68 (27%), Positives = 33/68 (48%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TL+E+++VL I+G++ A V D +T ++ +I AL NYP
Sbjct: 14 QGFTLIEIMVVLVILGLLVAAVAPKILGRADQAKVTTTQTNIKTISNALNMYKLDNYNYP 73
Query: 84 ATADATAA 91
++ A
Sbjct: 74 SSEQGIEA 81
>ref|YP_844240.1| general secretion pathway protein G [Syntrophobacter fumaroxidans
MPOB]
Length = 149
Score = 33.1 bits (74), Expect = 3.2
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E++IV+ I+G+++A V + A ++ I AL +G YP
Sbjct: 20 GFTLIELLIVMIILGLLAALVGPRLIHKLGGSRQQAAKTQISMIGTALDAYRLDIGRYPT 79
Query: 85 TADATAASKLTSG 97
T + A + G
Sbjct: 80 TEEGLGALRKNPG 92
>ref|YP_746756.1| type II secretion system protein G [Nitrosomonas eutropha C91]
Length = 151
Score = 33.1 bits (74), Expect = 3.2
Identities = 17/62 (27%), Positives = 33/62 (53%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+ ++ V ++D T Q+L ++ A+ + Y G Y
Sbjct: 32 ERGFTLIELLVVMTIIAILLTIVSPRYFTSVDRAKETVLRQNLGILRDAIDKYYADTGKY 91
Query: 83 PA 84
PA
Sbjct: 92 PA 93
>ref|YP_127217.1| hypothetical protein lpl1879 [Legionella pneumophila str. Lens]
Length = 137
Score = 33.1 bits (74), Expect = 3.2
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +++ Q +S ++A+++T
Sbjct: 3 QKGFTLIELMIVVAIIGILAAIAIPAYQDYTIRARVSEGLQMASSAKLAVSETAITNNAL 62
Query: 83 PATADAT 89
P T AT
Sbjct: 63 PPTQAAT 69
>ref|YP_574223.1| methylation [Chromohalobacter salexigens DSM 3043]
Length = 146
Score = 33.1 bits (74), Expect = 3.2
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQV---ALTQTYRGL 79
Q G TL+E++IV+ I+G+++A + Q + ++ A +L S+Q Q R +
Sbjct: 5 QRGFTLIELMIVVAIIGILAAIAIPQYQNYVARSEVSAALATLKSLQTPAELAIQEGRTI 64
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNP 112
+ + ++ + +G + L ++ P
Sbjct: 65 SDDDLSELGLSSDSVQNGTIGLSDFDGEDDSTP 97
>ref|NP_622885.1| hypothetical protein TTE1265 [Thermoanaerobacter tengcongensis
MB4]
Length = 108
Score = 33.1 bits (74), Expect = 3.2
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTY-RGLGN 81
+ G TL+E+I+V+ I+G+++A V ++ + +L +Q A+ + Y G
Sbjct: 12 ERGFTLIELIVVIAILGILAAIAVPRVTTSLKTAKENADMANLKILQNAIERYYVEHEGK 71
Query: 82 YPATADATA 90
YP + D A
Sbjct: 72 YPQSLDELA 80
>ref|YP_157675.1| putative bacterial general secretion pathway protein G related
protein [Azoarcus sp. EbN1]
Length = 148
Score = 32.7 bits (73), Expect = 4.1
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++V+ I+G+++ V I + A +++++ AL LG+YP+
Sbjct: 20 GFTLLELLVVMVIIGLLAGYVGPRFFAQIGKSEVKTARAQIDALEKALDHYRLDLGHYPS 79
Query: 85 T 85
T
Sbjct: 80 T 80
>ref|YP_933601.1| general secretion pathway protein G [Azoarcus sp. BH72]
Length = 151
Score = 32.7 bits (73), Expect = 4.1
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++V+ I+G+++ V I + A +++ + AL Q +G YP+
Sbjct: 22 GFTLLELLVVMVIIGLLAGYVGPRFFAQIGKSEVKTARAQIDAFEKALDQYRLDVGRYPS 81
Query: 85 TADATAA 91
T A
Sbjct: 82 TEQGLQA 88
>ref|YP_739351.1| methylation site containing protein [Shewanella sp. MR-7]
Length = 123
Score = 32.7 bits (73), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G TL+E++I + I+G+++A + + A Q L S AL + Y G Y
Sbjct: 5 RKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLY 64
Query: 83 PATADAT 89
PA+ T
Sbjct: 65 PASQSLT 71
>ref|YP_732847.1| methylation site containing protein [Shewanella sp. MR-4]
Length = 123
Score = 32.7 bits (73), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G TL+E++I + I+G+++A + + A Q L S AL + Y G Y
Sbjct: 5 RKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLY 64
Query: 83 PATADAT 89
PA+ T
Sbjct: 65 PASQSLT 71
>ref|ZP_00417329.1| putative general secretion pathway protein G [Azotobacter
vinelandii AvOP]
Length = 124
Score = 32.7 bits (73), Expect = 4.1
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+ + V +++ T QSL ++ AL Q Y G+Y
Sbjct: 4 RSGFTLIELLVVMAIIASLLTIAVPRYFSSLEQSRETTLRQSLAVMRDALDQYYGDTGSY 63
Query: 83 PATADATAASKLTSGL 98
P + + L
Sbjct: 64 PENLETLVEQRYLRAL 79
>ref|NP_903879.1| type IV pilin [Chromobacterium violaceum ATCC 12472]
Length = 155
Score = 32.7 bits (73), Expect = 4.1
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +++ ++ + A+T+ Y
Sbjct: 7 QQGFTLIELMIVVAIVGILAAIAIPAYQDYTKRARVSEGLALADAAKTAVTEYY---ATN 63
Query: 83 PATADATAASKLTSGLVS 100
A A TA T GL +
Sbjct: 64 NAWASGTAPFNTTYGLAA 81
>ref|NP_864400.1| hypothetical protein-transmembrane region and signal peptide
prediction [Rhodopirellula baltica SH 1]
Length = 420
Score = 32.7 bits (73), Expect = 4.1
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E+++V+ I+GV+ ++ Q A ++ + + I +AL +
Sbjct: 5 TQQKGFTLVELLVVIAIIGVLVGLLLPAVQAAREAARRMSCSNNFKQIGLALHNYHSAYN 64
Query: 81 NYPATADAT 89
PA + T
Sbjct: 65 MLPAHSAGT 73
>ref|NP_868237.1| hypothetical protein-putative conserved hypothetical protein
[Rhodopirellula baltica SH 1]
Length = 439
Score = 32.7 bits (73), Expect = 4.1
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+GV+ ++ Q A ++ + + I +A+ + N
Sbjct: 36 RRGFTLVELLVVVAIIGVLVGLLLPAVQAAREAARRMSCSNNFKQIGLAIHNYHSAYNNL 95
Query: 83 PATADATAA 91
P A T A
Sbjct: 96 PVHASGTYA 104
>ref|YP_828963.1| general secretion pathway protein G [Solibacter usitatus
Ellin6076]
Length = 150
Score = 32.7 bits (73), Expect = 4.1
Identities = 18/74 (24%), Positives = 36/74 (48%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
+ + G+TL+E+++V+ I+G+ A V + +D T +++ AL G
Sbjct: 12 SSRAGVTLIEMLVVVTIIGLFVALVGPGLWKKVDESKTTLTRSQIDNFMTALGTYKLDTG 71
Query: 81 NYPATADATAASKL 94
+P T AA ++
Sbjct: 72 TFPTTEQGLAALRI 85
>ref|NP_790766.1| type IV pilus biogenesis protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 142
Score = 32.7 bits (73), Expect = 4.1
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG-- 80
Q+G TL+E++IV+ I+G+++A + Q T+ ++ S++ A+ G
Sbjct: 4 QKGFTLIELMIVVAIVGILAAVAIPSYQNYAKKAAYTEVLAAMASVKTAVGVCAAQQGTV 63
Query: 81 ---NYPATADATAASKLTSGLVSLGKISSDEA 109
+ A T S T+G V+ +I++ A
Sbjct: 64 ADCDTAAKVGVTLPSGATTGAVNKMEITATSA 95
>ref|YP_741094.1| Fimbrial protein pilin [Alkalilimnicola ehrlichei MLHE-1]
Length = 165
Score = 32.7 bits (73), Expect = 4.1
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQ 74
Q+G TL+E++IV+ I+G+++A + Q + + A +L+S++ + +
Sbjct: 31 QQGFTLIELMIVVAIIGILAAIAIPQYQNYVTRSQASSALSTLSSLRTSFEE 82
>ref|YP_871053.1| methylation site containing protein [Shewanella sp. ANA-3]
Length = 123
Score = 32.7 bits (73), Expect = 4.1
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
++G TL+E++I + I+G+++A + + A Q L S AL + Y G Y
Sbjct: 5 RKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVSSAQALERHYSRNGLY 64
Query: 83 PATADAT 89
PA+ T
Sbjct: 65 PASQSLT 71
>ref|YP_755615.1| general secretion pathway protein G [Maricaulis maris MCS10]
Length = 151
Score = 32.7 bits (73), Expect = 4.1
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G +LLE++I + I+G+++ VV A D ++ KA + +++ AL + YP+
Sbjct: 19 GFSLLEILISITILGLLATIVVINVLPAQDQAMVQKARTDIATLEQALDAYRMDMREYPS 78
Query: 85 ---------TADATAASKLTSGLVSLGKISSDEAKNPFN----GTN--MNIFSFPRN 126
TA A ++ G + ++ D NP+ G N ++IFS R+
Sbjct: 79 SEAGLVALTTAPRDAGARYREG-GYIRRLPDDPWGNPYQYIYPGRNGMLDIFSLGRD 134
>ref|YP_692335.1| Pilin protein family, putative [Alcanivorax borkumensis SK2]
Length = 148
Score = 32.7 bits (73), Expect = 4.1
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 9/141 (6%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQ----RAIDSQIMTKAAQSLNSIQVALTQTYRG 78
Q+G TL+E++IV+ I+G+++A + Q RA S+++ AA + ++ +
Sbjct: 6 QQGFTLIELMIVVAIIGILAAVALPAYQDYTTRAKMSEVIGFAASAKTAVTECIQNDNAT 65
Query: 79 LG-NYPATADATAASKLTSGLVSLGKISSD-EAKNPFNGTNMNIFSFPRNAAANKAFAIS 136
G N + A +TS V + +D + GTN + A+ + ++S
Sbjct: 66 AGCNSNSAVGMDEAENITSTYVESVTVGADGQVVVAIQGTNDDTLD---AASISLTPSLS 122
Query: 137 VDGLTQAQCKTLITSVGDMFP 157
G C TS+ P
Sbjct: 123 SGGGVSWSCAPSATSINKFLP 143
>ref|YP_855105.1| general secretion pathway protein G [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 143
Score = 32.7 bits (73), Expect = 4.1
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLEV++V+ I+G++++ VV + KA + +++ AL Y
Sbjct: 6 QSGFTLLEVMVVIVILGILASLVVPNLMGNKEKADQQKAVSDIVALENALDMYKLDNNRY 65
Query: 83 PAT 85
P T
Sbjct: 66 PTT 68
>ref|YP_847768.1| hypothetical protein Sfum_3663 [Syntrophobacter fumaroxidans MPOB]
Length = 135
Score = 32.7 bits (73), Expect = 4.1
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 25 GMTLLEV--------IIVLGIMGVVSAGV---VTLAQRAIDSQIMTKAAQSLNSIQVALT 73
G TLLEV +IV G+MGV+SA + + L ++++ ++ AAQ + + V
Sbjct: 15 GFTLLEVMVSLLVGTLIVGGVMGVISASLQFNLRLKEKSLIQPVLEAAAQEILADPVKAE 74
Query: 74 QTYRGLGNYPATADATAASKLTSGLVSLG 102
Q L + P T T A +LT LV +G
Sbjct: 75 QGDLTLNDMPET--PTVAVRLT--LVEVG 99
>ref|YP_926053.1| general secretion pathway protein G [Shewanella amazonensis SB2B]
Length = 143
Score = 32.7 bits (73), Expect = 4.1
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TLLE+++V+ I+G+++A V+ +S + KA + +++ AL Y
Sbjct: 6 QQGFTLLEIMVVIVILGLLAAMVLPNVLGNKESADIKKAVADIVALENALDMYKLDNSVY 65
Query: 83 PAT 85
P T
Sbjct: 66 PTT 68
>ref|YP_578174.1| Type I secretion system ATPase, PrtD [Nitrobacter hamburgensis X14]
Length = 671
Score = 32.7 bits (73), Expect = 4.1
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 34 VLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR--------GLGNYPAT 85
V+ MG++ GV Q ++S A LN I +++ R G G Y A
Sbjct: 303 VINAMGMIPEGVQVWGQETVESLKAQVAGHDLNIIMTGISKFLRLGTQITILGWGAYLAL 362
Query: 86 ADATAASKLTSGLVSLGKISSDEAKNPFNGT 116
S+LT G++ I + A P GT
Sbjct: 363 E-----SELTGGMIIAASIVASRALAPLEGT 388
>ref|YP_748810.1| general secretion pathway protein H [Shewanella frigidimarina
NCIMB 400]
Length = 190
Score = 32.7 bits (73), Expect = 4.1
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQ 63
Q G TLLEV+IV +MG+V++ V A Q++ K AQ
Sbjct: 6 QAGFTLLEVLIVALLMGLVASAVTMSISVAGPEQMLKKQAQ 46
>ref|YP_131551.1| putative type II secretory pathway, pseudopilin EpsG
[Photobacterium profundum SS9]
Length = 155
Score = 32.7 bits (73), Expect = 4.1
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLEV++V+ I+GV+++ VV + KA +++++ +L Y
Sbjct: 16 QRGFTLLEVMVVIVILGVLASLVVPNLLGNKEKADQQKAVTDISALEQSLDMYKLDNSVY 75
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKNPFNG 115
P T A LVS+ SS E +N +G
Sbjct: 76 PTTDQGLEA------LVSMPS-SSPEPRNYRDG 101
>ref|YP_131384.1| putative MSHA pilin protein MshA [Photobacterium profundum SS9]
Length = 158
Score = 32.7 bits (73), Expect = 4.1
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 25/122 (20%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++ VT A R ++ Q ++A SL ++ A+
Sbjct: 4 QGGFTLIELVVVIVILGILA---VTAAPRFLNLQNDARSA-SLQGLKGAI---------- 49
Query: 83 PATADATAASKLTSGLVSLGKISS--DEAKNPFNGTNMNI-FSFPRNAAANKAFAISVDG 139
AS +T G ++ + S + + NG N+ I F +P+ A + A +V+G
Sbjct: 50 ------EGASGITFGKAAINGVESIGNSSITGDNGANIAIAFGYPQ--ATSAALEAAVNG 101
Query: 140 LT 141
L+
Sbjct: 102 LS 103
>ref|YP_123639.1| type II secretory pathway protein LspH [Legionella pneumophila str.
Paris]
Length = 161
Score = 32.7 bits (73), Expect = 4.1
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 21 TGQEGMTLLEVIIVLGIMGV-VSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
T +G TL+E++IV+ I+G+ + ++ +I A Q N++ +A Q
Sbjct: 2 TTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQA---- 57
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNM-NIFSFPRNAAANKAFAISVD 138
+T K+ + + K NP + + ++ FP+N + +
Sbjct: 58 ----ILESSTLGLKIDNTSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLK---TNQ 110
Query: 139 GLTQAQCKTLITSVGDMFPY 158
T+ +I GDM P+
Sbjct: 111 KHTRGNPAIIIAPSGDMTPF 130
>ref|YP_126662.1| type II secretory pathway protein LspH [Legionella pneumophila str.
Lens]
Length = 161
Score = 32.7 bits (73), Expect = 4.1
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 21 TGQEGMTLLEVIIVLGIMGV-VSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
T +G TL+E++IV+ I+G+ + ++ +I A Q N++ +A Q
Sbjct: 2 TTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQA---- 57
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNM-NIFSFPRNAAANKAFAISVD 138
+T K+ + + K NP + + ++ FP+N + +
Sbjct: 58 ----ILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLKTNLK-- 111
Query: 139 GLTQAQCKTLITSVGDMFPY 158
++ +I GDM P+
Sbjct: 112 -HSRGNPAIIIAPSGDMTPF 130
>ref|YP_315958.1| pilus assembly protein PilA [Thiobacillus denitrificans ATCC
25259]
Length = 111
Score = 32.7 bits (73), Expect = 4.1
Identities = 19/71 (26%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TL+E++IV+ I+G+++A + + +D S++ A+++ ++AL + + +
Sbjct: 5 QKGFTLIELMIVVAIIGILAAVAIPAYSQYVDKSKVSACKAEAVAYARIALAEASQN-NS 63
Query: 82 YPATADATAAS 92
PA A A+
Sbjct: 64 IPAANVAACAT 74
>ref|YP_315060.1| type II secretion system protein [Thiobacillus denitrificans ATCC
25259]
Length = 124
Score = 32.7 bits (73), Expect = 4.1
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAA---QSLNSIQVALTQTYRGLGN 81
G TL+E+++V M +V+ + A R + K A Q+L ++ A+ + Y +G
Sbjct: 13 GFTLIEILVV---MAIVATLLTIAAPRYFNQSDRAKEAVLRQNLAVMRDAIDKYYGDVGV 69
Query: 82 YPATADATAASK 93
YP + DA A K
Sbjct: 70 YPESLDALVAGK 81
>ref|YP_314300.1| hypothetical protein Tbd_0542 [Thiobacillus denitrificans ATCC
25259]
Length = 236
Score = 32.7 bits (73), Expect = 4.1
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVAL 72
T Q G TL+E+ IVL IM ++ G+ I ++ + + Q+LN + A+
Sbjct: 2 TPQRGFTLIELAIVLVIMTILIGGLAVPLSAQIQARRIAETKQTLNEAREAI 53
>ref|YP_463896.1| General secretion pathway protein G [Anaeromyxobacter dehalogenans
2CP-C]
Length = 137
Score = 32.7 bits (73), Expect = 4.1
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL-GN 81
Q GMTL+E+++V+ I+G++++ V + + A + I + T++ L G
Sbjct: 10 QRGMTLIEIMVVIVILGLIASAVAVNVVGQMSKARVDTAKNDVRKIADGV-DTFKVLKGR 68
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRNA 127
YP T + + ++ K S K+P+N N ++ +P A
Sbjct: 69 YPTTEEGLGI-LIKENILKANKEGS--LKDPWN--NDYVYLYPGQA 109
>ref|YP_095390.1| general secretion pathway protein LspH [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 184
Score = 32.7 bits (73), Expect = 4.1
Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 21 TGQEGMTLLEVIIVLGIMGV-VSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
T +G TL+E++IV+ I+G+ + ++ +I A Q N++ +A Q
Sbjct: 25 TTHKGFTLIEILIVIVIIGITLGFALIAFGDFGESRRIQFSAEQLANTLSLAQQQA---- 80
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNM-NIFSFPRNAAANKAFAISVD 138
+T K+ + + K NP + + ++ FP+N + +
Sbjct: 81 ----ILESSTLGLKIDNSSYQILKFQDQAGWNPISNKGIFKLYYFPKNVVISLKTNLK-- 134
Query: 139 GLTQAQCKTLITSVGDMFPY 158
++ +I GDM P+
Sbjct: 135 -HSRGNPAIIIAPSGDMTPF 153
>ref|YP_587904.1| hypothetical protein Rmet_5776 [Ralstonia metallidurans CH34]
Length = 341
Score = 32.7 bits (73), Expect = 4.1
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 56 QIMTKAAQSLNSIQVALTQTYRGL-GNYPATADATAASKLTSGLVSLGKISSDEAKNPFN 114
++ T+ Q L A + RGL PA +A AA T + ++D+ N
Sbjct: 40 RLATRYQQRLAPDTAAALEYVRGLVAQLPAVHEACAADWSTDACIHACFATADDVSRALN 99
Query: 115 GTNMNIFSFPRNAAANKAFAISVDGLTQAQCKTL-ITSVGD 154
G F N AA++A+A+ G+T + TL + + GD
Sbjct: 100 GAATLRKFFDNNLAADEAYAVL--GMTMVERHTLGVATEGD 138
>ref|NP_065346.1| minor pilin subunit PilV [Escherichia coli]
Length = 417
Score = 32.3 bits (72), Expect = 5.4
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 11/136 (8%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G++LLEV++V+GIM +V V + +++ AA+ N+ A+ NY
Sbjct: 6 KGVSLLEVLLVIGIMVMVIPKVYENIENHLNNVRWQNAAEHANTYNTAVR-------NYV 58
Query: 84 A-TADATAASKLTSGLVSLGKISSDEAKNPFNGTNMN---IFSFPRNAAANKAFAISVDG 139
A A A L + I K+ F+ +N I +N+ ++ A++
Sbjct: 59 ADNASTLLAGSLPKTITPATLIQKGYLKSGFSESNFGQSYITGIAKNSKTSRLEALTCSN 118
Query: 140 LTQAQCKTLITSVGDM 155
Q+ + + SV M
Sbjct: 119 GGQSLSEAGMRSVASM 134
>ref|NP_864461.1| similar to general secretion pathway protein G [precursor]
[Rhodopirellula baltica SH 1]
Length = 387
Score = 32.3 bits (72), Expect = 5.4
Identities = 15/63 (23%), Positives = 35/63 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+GV+ ++ Q A ++ + ++ I +AL + ++
Sbjct: 39 RRGFTLVELLVVIAIIGVMVGLLLPAVQSAREAARRMSCSNNMKQIGLALHNYHSAFKSF 98
Query: 83 PAT 85
PA+
Sbjct: 99 PAS 101
>ref|NP_994149.1| general secretion pathway protein G [Yersinia pestis biovar
Microtus str. 91001]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|NP_841776.1| Fimbrial protein pilin [Nitrosomonas europaea ATCC 19718]
Length = 139
Score = 32.3 bits (72), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
TG G TL+EV++V+ I+G+++A Q + +A L + L + Y
Sbjct: 8 TGNSGFTLIEVMVVVAIVGILAAIAYPSYQEHVRRANRAEARGILLEMAQLLERNYTEAN 67
Query: 81 NY 82
NY
Sbjct: 68 NY 69
>ref|NP_790659.1| hypothetical protein PSPTO_0812 [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 171
Score = 32.3 bits (72), Expect = 5.4
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 23 QEGMTLLEVIIVLGIM--GVVSAGVVTL-AQRAIDSQIMTKAAQSLNSIQVALTQTYRGL 79
Q GMTL+EV++ + I+ G++ A + L A + DS MT A +A R
Sbjct: 9 QAGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASF-----IAYDMMDRIR 63
Query: 80 GNYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFSFPRN 126
N A A ++ + + +L ++ A NP + +++ F N
Sbjct: 64 ANVDGNASANGSTNVLA-TYALANLAGAPAANPNDARAQDLYDFKTN 109
>ref|YP_259856.1| general secretion pathway protein H [Pseudomonas fluorescens
Pf-5]
Length = 153
Score = 32.3 bits (72), Expect = 5.4
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E+++VL I+G+ SA V L+ + Q++ K A+ L + + + Q
Sbjct: 6 QQGFTLIELMVVLVIIGIASA-AVGLSIKPDPLQLLRKDAERLAQL-LQVAQAEARADGR 63
Query: 83 PATADATA 90
P T ATA
Sbjct: 64 PITWRATA 71
>ref|NP_404438.1| general secretion pathway protein G [Yersinia pestis CO92]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|NP_716485.1| type IV pilin, putative [Shewanella oneidensis MR-1]
Length = 123
Score = 32.3 bits (72), Expect = 5.4
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 21 TGQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG 80
T Q+G TL+E++I + I+G+++A + + A Q L + AL + Y G
Sbjct: 3 TLQKGFTLIELMIAVAIIGILAAIAIPSFNEYLKQGRRFDAQQYLVTSAQALERHYSRNG 62
Query: 81 NYPAT 85
YPA+
Sbjct: 63 LYPAS 67
>ref|NP_641051.1| type II secretion system protein G [Xanthomonas axonopodis pv.
citri str. 306]
Length = 154
Score = 32.3 bits (72), Expect = 5.4
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN--Y 82
G TL+E+++V+ I+G+++ V+ + D +M KA + ++ AL +TYR L N Y
Sbjct: 21 GFTLVELMVVIVIIGLLATVVMINVMPSQDRAMMEKARADVAVLEQAL-ETYR-LDNLSY 78
Query: 83 PATADATAA 91
P+T A
Sbjct: 79 PSTEQGLQA 87
>ref|NP_670500.1| general protein secretion protein [Yersinia pestis KIM]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|YP_741701.1| general secretion pathway protein H [Alkalilimnicola ehrlichei
MLHE-1]
Length = 152
Score = 32.3 bits (72), Expect = 5.4
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAI-DSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
G TL+E++I L ++ VV+A QR + +Q+ T A + ++ VA +Q R +
Sbjct: 6 GFTLIELMITLVVLAVVAAIAAPSMQRIMARNQLTTAANDMVTALTVARSQAVREGSPWT 65
Query: 84 ATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIFS 122
T A S L LV SD + N+ + S
Sbjct: 66 VTMSGDAESWL---LVDADSGGSDRQRRFSRNANVAVDS 101
>ref|NP_417790.1| predicted general secretory pathway component, cryptic [Escherichia
coli K12]
Length = 195
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TLLEV+ L I ++S + +A + Q K Q N +Q +T L
Sbjct: 5 QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN--GTNMNIFSFPRNAAANKAFAISVDG 139
A + + + G ++ S + P + T + + + RN +A SVDG
Sbjct: 65 LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDG 124
Query: 140 LTQAQCKTLITSV 152
+ ++ V
Sbjct: 125 RKDQPAQAMLEHV 137
>ref|YP_854404.1| putative type II secretion protein GspG [Escherichia coli APEC
O1]
Length = 151
Score = 32.3 bits (72), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLEV++V+ I+GV+++ VV + KA + +++ AL G YP
Sbjct: 13 GFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPT 72
Query: 85 TADATAA 91
T A
Sbjct: 73 TEQGLEA 79
>ref|YP_858932.1| putative general secretion pathway protein J precursor [Escherichia
coli APEC O1]
Length = 195
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TLLEV+ L I ++S + +A + Q K Q N +Q +T L
Sbjct: 5 QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN--GTNMNIFSFPRNAAANKAFAISVDG 139
A + + + G ++ S + P + T + + + RN +A SVDG
Sbjct: 65 LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDG 124
Query: 140 LTQAQCKTLITSV 152
+ ++ V
Sbjct: 125 RKDQPAQAMLEHV 137
>ref|YP_757998.1| general secretion pathway protein G [Maricaulis maris MCS10]
Length = 149
Score = 32.3 bits (72), Expect = 5.4
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G+TL E+++VL I+ +++ V + A L SIQ +L Y G YP+
Sbjct: 19 GITLFELLVVLVIIALLATIVAPRVIGYAGRSKVNIATAQLASIQTSLELYYLDTGQYPS 78
Query: 85 TADATAA 91
A+ A
Sbjct: 79 EAEGLTA 85
>ref|YP_648944.1| general secretion pathway protein G [Yersinia pestis Nepal516]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|YP_542754.1| probable general secretion pathway protein J precursor [Escherichia
coli UTI89]
Length = 195
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TLLEV+ L I ++S + +A + Q K Q N +Q +T L
Sbjct: 5 QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN--GTNMNIFSFPRNAAANKAFAISVDG 139
A + + + G ++ S + P + T + + + RN +A SVDG
Sbjct: 65 LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDG 124
Query: 140 LTQAQCKTLITSV 152
+ ++ V
Sbjct: 125 RKDQPAQAMLEHV 137
>ref|YP_542360.1| hypothetical type II secretion protein GspG [Escherichia coli
UTI89]
Length = 151
Score = 32.3 bits (72), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLEV++V+ I+GV+++ VV + KA + +++ AL G YP
Sbjct: 13 GFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPT 72
Query: 85 TADATAA 91
T A
Sbjct: 73 TEQGLEA 79
>ref|YP_671300.1| probable general secretion pathway protein J precursor [Escherichia
coli 536]
Length = 195
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TLLEV+ L I ++S + +A + Q K Q N +Q +T L
Sbjct: 5 QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN--GTNMNIFSFPRNAAANKAFAISVDG 139
A + + + G ++ S + P + T + + + RN +A SVDG
Sbjct: 65 LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDG 124
Query: 140 LTQAQCKTLITSV 152
+ ++ V
Sbjct: 125 RKDQPAQAMLEHV 137
>ref|YP_670927.1| hypothetical type II secretion protein [Escherichia coli 536]
Length = 151
Score = 32.3 bits (72), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLEV++V+ I+GV+++ VV + KA + +++ AL G YP
Sbjct: 13 GFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPT 72
Query: 85 TADATAA 91
T A
Sbjct: 73 TEQGLEA 79
>ref|YP_650369.1| general secretion pathway protein G [Yersinia pestis Antiqua]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|YP_941573.1| general secretion pathway protein G [Psychromonas ingrahamii 37]
Length = 144
Score = 32.3 bits (72), Expect = 5.4
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TLLE+++V+ I+G++++ VV D K L +++ AL Y
Sbjct: 8 QKGFTLLEIMVVIVILGILASLVVPNLMGNKDKADRQKVVSDLVALENALDMYRLDNSYY 67
Query: 83 PAT 85
P T
Sbjct: 68 PTT 70
>ref|YP_394461.1| hypothetical protein Tmden_1952 [Thiomicrospira denitrificans ATCC
33889]
Length = 1538
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 33 IVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPATADATAAS 92
+V G G+ G VT S +T AA ++++ ++T + + DATA +
Sbjct: 1026 VVSGDTGIADEGSVTT------SITLTDAASNISTATTSVTLSGESI-------DATAPT 1072
Query: 93 KLTSGLVSLGKISSDEAKNPFNGTNMNI---FSFPRNAAANKAFAISVDGLTQAQCKTL 148
T+ V+L + +N NGTN N+ + A + + VDG T A T+
Sbjct: 1073 APTA--VTLTTVGGTLVENTLNGTNTNLTASATITAGEATGGSAVLKVDGTTIATDSTI 1129
>ref|YP_344523.1| general secretion pathway protein H [Nitrosococcus oceani ATCC
19707]
Length = 147
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G++++ + Q +++A + + A+ +T LG
Sbjct: 5 QQGFTLIELMIVVAIIGILASVAIPAYQDYTIRAKVSEAVTLASEAKTAVAETAASLGGL 64
Query: 83 PATADATAASKLTS 96
A + +L++
Sbjct: 65 TNVTAANSGYELSN 78
>ref|YP_317576.1| type I secretion system ATPase, PrtD [Nitrobacter winogradskyi
Nb-255]
Length = 668
Score = 32.3 bits (72), Expect = 5.4
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 34 VLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR--------GLGNYPAT 85
V+ MG++ GV Q ++S A LN I +++ R G G Y A
Sbjct: 300 VINAMGMIPEGVQIWGQETVESLKAQVAGHDLNIIMTGISKFLRLGTQIGILGWGAYLAL 359
Query: 86 ADATAASKLTSGLVSLGKISSDEAKNPFNGT 116
S+LT G++ I + A P GT
Sbjct: 360 E-----SELTGGMIIAASIVASRALAPLEGT 385
>ref|AP_004459.1| predicted general secretory pathway component, cryptic [Escherichia
coli W3110]
Length = 195
Score = 32.3 bits (72), Expect = 5.4
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAID-SQIMTKAAQSLNSIQVALTQTYRGLGN 81
Q+G TLLEV+ L I ++S + +A + Q K Q N +Q +T L
Sbjct: 5 QQGFTLLEVMAALAIFSMLSVLAFMIFSQASELHQRSQKEIQQFNQLQRTITILDNDLLQ 64
Query: 82 YPATADATAASKLTSGLVSLGKISSDEAKNPFN--GTNMNIFSFPRNAAANKAFAISVDG 139
A + + + G ++ S + P + T + + + RN +A SVDG
Sbjct: 65 LVARRNRSTDKIMVLGEEAIFTTQSRDPLAPLSEAQTLLTVHWYLRNHTLYRAVRTSVDG 124
Query: 140 LTQAQCKTLITSV 152
+ ++ V
Sbjct: 125 RKDQPAQAMLEHV 137
>ref|YP_409351.1| putative type II secretion protein [Shigella boydii Sb227]
Length = 151
Score = 32.3 bits (72), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLEV++V+ I+GV+++ VV + KA + +++ AL G YP
Sbjct: 13 GFTLLEVMVVIVILGVLASLVVPNLLGNKEKANRQKAISDIVALENALDMYRLDNGRYPT 72
Query: 85 TADATAA 91
T A
Sbjct: 73 TEQGLEA 79
>ref|YP_404603.1| putative type II secretion protein [Shigella dysenteriae Sd197]
Length = 151
Score = 32.3 bits (72), Expect = 5.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLEV++V+ I+GV+++ VV + KA + +++ AL G YP
Sbjct: 13 GFTLLEVMVVIVILGVLASLVVPNLLGNKEKADRQKAISDIVALENALDMYRLDNGRYPT 72
Query: 85 TADATAA 91
T A
Sbjct: 73 TEQGLEA 79
>ref|YP_071567.1| general secretion pathway protein G [Yersinia pseudotuberculosis
IP 32953]
Length = 145
Score = 32.3 bits (72), Expect = 5.4
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 24 EGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
+G TLLE+++V+ I+G++++ + + KA +++++ AL G+YP
Sbjct: 7 KGFTLLEIMVVIVILGLLASLTIPSLMSNKNRADQQKAVSDISALENALDMYRLDNGDYP 66
Query: 84 ATADATAA 91
AA
Sbjct: 67 TEQQGIAA 74
>ref|NP_520431.1| PUTATIVE GSPG-RELATED TRANSMEMBRANE PROTEIN [Ralstonia
solanacearum GMI1000]
Length = 155
Score = 32.3 bits (72), Expect = 5.4
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++V+ I+G+++ V I + A + S+ AL Q +G YP+
Sbjct: 26 GFTLLELLVVMVIIGLLAGLVAPQYFDQIGKSNLKIAKAQIESLGKALDQYRLDVGAYPS 85
Query: 85 TADATAA 91
T + A
Sbjct: 86 TEEGLDA 92
>ref|YP_545452.1| General secretion pathway protein G [Methylobacillus flagellatus
KT]
Length = 160
Score = 32.3 bits (72), Expect = 5.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TLLE+++V+ I+G+++ V I A + ++ AL Q G YP+
Sbjct: 30 GFTLLELLVVMVIIGLLAGYVGPKYFAQIGKSEAKTAKAQIEALGKALDQYRLDTGRYPS 89
Query: 85 TADATAASKLTSGLVSLGKISSDEAK 110
T GL +L SDE++
Sbjct: 90 T---------EQGLAALNAQPSDESR 106
>ref|YP_462325.1| tfp pilus assembly protein, major pilin [Syntrophus aciditrophicus
SB]
Length = 123
Score = 32.0 bits (71), Expect = 7.1
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQR----------AIDSQIMTKAAQSLNSIQVA 71
GQ+G TL+E++IV+ I+G+++A + Q+ D++ AAQ+ S +
Sbjct: 10 GQKGFTLIELMIVIAIIGILAAIAIPQFQQYRTRGYNTAAKADAKNAYTAAQAYFSDHPS 69
Query: 72 LT-QTYRGLGNY--PATAD-ATAASKLTSGLVSLGKISSDE 108
+T + L NY A+AD T A+ GL K S+ +
Sbjct: 70 VTISSITDLANYGFKASADVTTTAAGDMDGLAITAKHSASD 110
>ref|ZP_00055704.1| COG2931: RTX toxins and related Ca2+-binding proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 12295
Score = 32.0 bits (71), Expect = 7.1
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 37 IMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPATADATAASKLTS 96
++G+V A +LAQ D+ A + + Q A T AT A A SKLT+
Sbjct: 1069 LLGLVKAAQSSLAQIVSDAAAAASRAADVAAAQQASTDAATASSTLSATVLAQAQSKLTA 1128
Query: 97 GLVSLG 102
+LG
Sbjct: 1129 AQAALG 1134
>ref|ZP_00767094.1| GAF [Chloroflexus aurantiacus J-10-fl]
Length = 661
Score = 32.0 bits (71), Expect = 7.1
Identities = 25/82 (30%), Positives = 41/82 (50%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G+ +T +I+ GI+G+V + V L+ R + A ++LN+ LT T +
Sbjct: 39 GETALTFGVALILGGIIGLVLSLVAWLSLRYALHEARQHAVRALNADLPPLTDTDPLVAL 98
Query: 82 YPATADATAASKLTSGLVSLGK 103
ADA AA +S LV+L +
Sbjct: 99 RQTVADAVAAVPRSSTLVTLAQ 120
>ref|NP_866707.1| hypothetical protein RB5451 [Rhodopirellula baltica SH 1]
Length = 374
Score = 32.0 bits (71), Expect = 7.1
Identities = 15/61 (24%), Positives = 33/61 (54%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
+ G TL+E+++V+ I+GV+ ++ Q A ++ T+ ++ I + +T +Y
Sbjct: 21 RSGFTLVELLVVIAIIGVLVGLLLPAVQSAREAARRTQCKNNVKQIVLGMTMFEHTFKHY 80
Query: 83 P 83
P
Sbjct: 81 P 81
>ref|NP_797035.1| putative fimbrial assembly protein PilE [Vibrio parahaemolyticus
RIMD 2210633]
Length = 143
Score = 32.0 bits (71), Expect = 7.1
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRG 78
GMTL+E++I + I+G+++A + T A L+ IQ+ L +Y G
Sbjct: 16 GMTLIELLIAVTIVGIIAAIAYPSYTNHVIKSHRTVALSDLSRIQLELETSYDG 69
>ref|NP_759850.1| Type II secretory pathway, pseudopilin EpsG [Vibrio vulnificus
CMCP6]
Length = 147
Score = 32.0 bits (71), Expect = 7.1
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLEV++V+ I+G++++ VV + KA + +++ AL Y
Sbjct: 8 QAGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAITDIVALENALDMYKLDNSVY 67
Query: 83 PATADATAASKLTSGLVSLGKISSDEAKNPFNG 115
P T A LV+ K SS E +N NG
Sbjct: 68 PTTDQGLEA------LVT--KPSSPEPRNYRNG 92
>ref|YP_325596.1| type II secretion protein [Escherichia coli O157:H7 EDL933]
Length = 144
Score = 32.0 bits (71), Expect = 7.1
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+GV+++ VV D K L +++ L Y
Sbjct: 6 QRGFTLLEIMVVIVILGVLASLVVPNLMGNKDKADRQKVMSDLVALESTLDMYRLDNNRY 65
Query: 83 PATADATAA 91
P T A
Sbjct: 66 PTTEQGLRA 74
>ref|YP_518646.1| hypothetical protein DSY2413 [Desulfitobacterium hafniense Y51]
Length = 159
Score = 32.0 bits (71), Expect = 7.1
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E++IV+ ++G+++ +V DS ++ S++ + + N
Sbjct: 9 GFTLIELMIVIAVIGILAVVLVPKMAGVKDSAKYAGVTTNVKSVEAYV------VANIDR 62
Query: 85 TADATAASKLTSGLVSLGKISSDEA-KNPFNGTNMNI 120
+GL+S G+ S + A NPF GT + I
Sbjct: 63 WVKTQKTVSEVNGLIS-GQFSGNNALANPFGGTALAI 98
>ref|YP_969297.1| general secretion pathway protein G [Acidovorax avenae subsp.
citrulli AAC00-1]
Length = 162
Score = 32.0 bits (71), Expect = 7.1
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVV-TLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYP 83
G TL+E+++VL I+GV++A +V + RA D+++ T A + +I AL YP
Sbjct: 31 GFTLIELMVVLVIIGVLAALIVPNVIDRADDARV-TAARTDITNIVQALKLYRLDNQRYP 89
Query: 84 ATADATAA--SKLTSGLVS------LGKISSDEAKNPFNGTNMNI 120
A ++ T+G V L K+ +D P+ N I
Sbjct: 90 TAEQGLQALIARPTNGPVPGNWRPYLEKLPNDPWGRPYQYLNPGI 134
>ref|NP_052612.1| EtpG [Escherichia coli O157:H7 str. Sakai]
Length = 144
Score = 32.0 bits (71), Expect = 7.1
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+GV+++ VV D K L +++ L Y
Sbjct: 6 QRGFTLLEIMVVIVILGVLASLVVPNLMGNKDKADRQKVMSDLVALESTLDMYRLDNNRY 65
Query: 83 PATADATAA 91
P T A
Sbjct: 66 PTTEQGLRA 74
>ref|YP_355569.1| type II secretory pathway, pseudopilin PulG [Pelobacter
carbinolicus DSM 2380]
Length = 161
Score = 32.0 bits (71), Expect = 7.1
Identities = 13/50 (26%), Positives = 32/50 (64%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVAL 72
Q+GMTL+E+++ I+ ++++ V+ L+Q A+ + ++L ++ A+
Sbjct: 9 QKGMTLMELVVATAILAILASAVLPLSQGAVRRSRELELRRNLRILRSAI 58
>ref|YP_390742.1| methylation site [Thiomicrospira crunogena XCL-2]
Length = 188
Score = 32.0 bits (71), Expect = 7.1
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQI--MTKAAQSLNSIQVALTQTYRGL- 79
Q+G TL+E+ IVL I+G++ GV+ + ++I + AQS+ S + Q Y+ L
Sbjct: 6 QKGFTLVEMAIVLVIIGLLLGGVLKGQELINGAKIKNVHSDAQSILSAVLTYQQRYKALP 65
Query: 80 --GNYPATADATAASKLTSGLVSLGK 103
N A AD + +G + G+
Sbjct: 66 GDDNSSAIADISTNKGNANGQIDDGE 91
>ref|YP_095932.1| Tfp pilus assembly protein, major type IV pilin class A
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 140
Score = 32.0 bits (71), Expect = 7.1
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q +T+ +S ++A+++T
Sbjct: 7 QKGFTLIELMIVVAIIGILAAIAIPAYQDYTIRARVTEGLTLADSAKLAVSETAITNNAL 66
Query: 83 PATADAT 89
P T AT
Sbjct: 67 PPTQAAT 73
>ref|NP_967254.1| hypothetical protein Bd0249 [Bdellovibrio bacteriovorus HD100]
Length = 207
Score = 32.0 bits (71), Expect = 7.1
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 23 QEGMTLLEVIIVLGIMGVV-SAGVVT---LAQRAIDSQIMTKAAQSLNSIQVAL---TQT 75
Q+G ++LE ++ G++ +V SA ++T +AQ+ +D + M S+ S++ L T
Sbjct: 12 QQGFSMLEALVAAGVLAIVTSAWLITSSVVAQKKLDLEQMALTQTSVLSLRDLLSINTSC 71
Query: 76 YRGLGNYPATADATAASKLTSGLV-----SLGKISSDEAKNPFN 114
G P + A+ + T L S K S E +N N
Sbjct: 72 LAAFGTAPVLSPASLPASQTLALAESYVGSWSKNVSVEIRNLMN 115
>ref|YP_932300.1| hypothetical protein azo0796 [Azoarcus sp. BH72]
Length = 215
Score = 31.6 bits (70), Expect = 9.2
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 14/58 (24%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVA-LTQTYRGL 79
Q G TL+E+ IVL I+G++ GV+ K + LN+ +V LTQ +RG+
Sbjct: 5 QHGFTLVEIAIVLVIIGLLLGGVL-------------KGQEILNNAKVKNLTQDFRGI 49
>ref|NP_930084.1| hypothetical protein plu2850 [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 659
Score = 31.6 bits (70), Expect = 9.2
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 33 IVLGIMGVVSAGVVTLAQRAIDSQIMTKAA---QSLNSIQVALTQTYRGLGNYPATADAT 89
I LGI+ +S+G V A + D+ ++T AA Q + +++ R A D T
Sbjct: 9 IALGIIATISSGSVFAASSSNDTILVTTAAGFQQKIEDAPASISVVSREQLETKAYRDVT 68
Query: 90 AASKLTSGLVSLGKISSDE 108
A K G+V G SS +
Sbjct: 69 DALKDVPGVVVTGGASSSD 87
>ref|YP_822344.1| general secretion pathway protein G [Solibacter usitatus
Ellin6076]
Length = 155
Score = 31.6 bits (70), Expect = 9.2
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQ-------- 74
Q G+TL+E+++ IM ++S V LA+ + + + A L ++ A+ +
Sbjct: 7 QRGLTLVELVVAFTIMLILSGMAVPLARARVRAARQRELANDLREMRAAIDKYKDYADLG 66
Query: 75 ----TYRGLGNYPATAD 87
+G N+P T D
Sbjct: 67 YLGPQKQGTNNWPETLD 83
>ref|NP_841642.1| putative general secretion pathway gspG related transmembrane
protein [Nitrosomonas europaea ATCC 19718]
Length = 160
Score = 31.6 bits (70), Expect = 9.2
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E++IV+ +MG++++ + L + M + +++AL Q + Y
Sbjct: 9 GFTLIELMIVVAVMGILASAAMPLGE-------MVVKREKERELRIALRQIRTAIDAYKQ 61
Query: 85 TADATAASK 93
AD K
Sbjct: 62 AADEGLVEK 70
>ref|NP_715812.1| general secretion pathway protein H [Shewanella oneidensis MR-1]
Length = 190
Score = 31.6 bits (70), Expect = 9.2
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQS-LNSIQVALTQT 75
G TL+EV++V+ +MG+ +AGV + Q + K AQ + + ++ L +T
Sbjct: 8 GFTLMEVMLVILLMGLTAAGVTMSIGNSGPQQALEKTAQQFIAATELVLDET 59
>ref|NP_253215.1| type 4 fimbrial precursor PilA [Pseudomonas aeruginosa PAO1]
Length = 149
Score = 31.6 bits (70), Expect = 9.2
Identities = 17/71 (23%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTY-RGLGN 81
Q+G TL+E++IV+ I+G+++A + Q + A ++N ++ + ++ RG+
Sbjct: 4 QKGFTLIELMIVVAIIGILAAIAIPQYQNYVARSEGASALATINPLKTTVEESLSRGIAG 63
Query: 82 YPATADATAAS 92
TA++
Sbjct: 64 SKIKIGTTAST 74
>ref|NP_935733.1| MSHA pilin protein MshA [Vibrio vulnificus YJ016]
Length = 156
Score = 31.6 bits (70), Expect = 9.2
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 22/156 (14%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TL+E+++V+ I+G+++ VT A R ++ Q +AA SL ++ A+ + G+
Sbjct: 4 QGGFTLIELVVVIVILGILA---VTAAPRFLNLQDDARAA-SLQGLKGAM-EGAAGIVYG 58
Query: 83 PATADATAASKLTSGLVSLG-----------KISSDEAKNPFNG--TNMNIFSFPRNAAA 129
A D S T VS+G + S+D +G T+ + + +
Sbjct: 59 RAAIDGKEGS-ATGQAVSVGSDTVKLTWGYPEASTDGIGKAVSGLSTDWAVVASTGTTSI 117
Query: 130 NKAFAISVDGLTQAQCK---TLITSVGDMFPYIAIK 162
+ +F V G T +C L TS + P I +K
Sbjct: 118 SYSFQSGVTGATADKCSVTYALNTSPSNAQPTITVK 153
>ref|YP_065777.1| similar to fimbrial protein [Precursor] [Desulfotalea
psychrophila LSv54]
Length = 77
Score = 31.6 bits (70), Expect = 9.2
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQ----RAIDSQIMTKAAQSLNSIQVALTQTYRG 78
Q+G TL+E++IV+ I+G++SA L + RA ++ + + A++ N + V + R
Sbjct: 5 QKGFTLIEIMIVVAIIGILSAIAFPLLRDYVIRAKVTEPLAEVAKAKNDLSVFYAEHNRF 64
Query: 79 LGNYPATAD 87
N AD
Sbjct: 65 PVNGAERAD 73
>ref|YP_269340.1| acetyl-CoA acetyltransferase [Colwellia psychrerythraea 34H]
Length = 402
Score = 31.6 bits (70), Expect = 9.2
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 43 AGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPATADATAASKL 94
A ++ +Q A+D + A+ ++ QV + T GLG PA +A A + L
Sbjct: 255 AAILVASQGAVDQHQLKPVAELVSYAQVGVDPTVMGLGPVPAIKEALAKANL 306
>ref|NP_417787.1| pseudopilin, cryptic, general secretion pathway [Escherichia coli
K12]
Length = 145
Score = 31.6 bits (70), Expect = 9.2
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+GV+++ VV + KA + +++ AL +Y
Sbjct: 7 QRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHY 66
Query: 83 PAT 85
P T
Sbjct: 67 PTT 69
>ref|YP_964968.1| methylation site containing protein [Shewanella sp. W3-18-1]
Length = 169
Score = 31.6 bits (70), Expect = 9.2
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN- 81
Q+G TL+E+++V+ I+G+++ VT A + I+ Q A +LN ++ +L +G +
Sbjct: 5 QQGFTLIELVVVIIILGILA---VTAAPKFINLQ-SDAYASTLNGVKASL----QGANSL 56
Query: 82 -YPATADATAASKLTSGLVSLGKISSDEAKN-PFNGTNMNIFSFPRNAAANKAFAISVD 138
Y A SK S ++ K +SD + NG ++ + + AA + + +D
Sbjct: 57 VYSKAAIQGVESKDVSSIIIDDKGNSDADDDVKVNG----VYGYLKQAADDMVLVLDLD 111
>ref|YP_659823.1| general secretion pathway protein J [Pseudoalteromonas atlantica
T6c]
Length = 232
Score = 31.6 bits (70), Expect = 9.2
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 23 QEGMTLLEVIIVLGI---MGVVSAGVVTLAQRAIDS-QIMTKAAQSLNSIQVALTQTYRG 78
+ G TLLE++I + I +G+ S GV+T IDS ++ T+ + L ++Q A+ R
Sbjct: 30 EHGFTLLEILIAMAIFTLIGIASTGVLT---SVIDSDELSTERFEKLQTLQRAMLTLERD 86
Query: 79 LGNYPATADATAASKLTSGLVSLG 102
+ A A +G V LG
Sbjct: 87 I--LQAVARPVRVEGEANGRVMLG 108
>ref|YP_900497.1| hypothetical protein Ppro_0809 [Pelobacter propionicus DSM 2379]
Length = 259
Score = 31.6 bits (70), Expect = 9.2
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Query: 21 TGQEGMTLLEVIIVLGIMGV---VSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYR 77
+G+ G TLLE+++++ IM V+ G + R + Q++ Q L A+ + +
Sbjct: 16 SGRRGFTLLELLVIVAIMAAVAFVAGGSYSGVSRQANDQLVRSEMQEL---ATAIRRFRQ 72
Query: 78 GLGNYPATAD----ATAASKLTSGLV 99
G YP T A K+T +
Sbjct: 73 DTGYYPKTGPFGLVGVGAGKITDAAI 98
>ref|YP_344869.1| General secretion pathway protein G [Nitrosococcus oceani ATCC
19707]
Length = 144
Score = 31.6 bits (70), Expect = 9.2
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 22 GQEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGN 81
G G TL+E+++VL I+G+++ + + + S A + + L +G
Sbjct: 10 GSFGFTLIELLVVLVILGLLAGLIGPQVMKYLGSAKTDSARLQIEDLAATLDLYRLEVGR 69
Query: 82 YPATADATAA 91
YP+T + A
Sbjct: 70 YPSTEEGLQA 79
>ref|YP_604231.1| glutamyl-tRNA(Gln) amidotransferase, A subunit [Deinococcus
geothermalis DSM 11300]
Length = 483
Score = 31.6 bits (70), Expect = 9.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 64 SLNSIQVALTQTYRGLGNYPATADATAASKLT-SGLVSLGKISSDE 108
+LN I T R L NY + DATA +LT +G V +GK + DE
Sbjct: 77 NLNVIGTRTTCGSRILANYVSPYDATAVERLTGAGAVIIGKANMDE 122
>ref|AP_004462.1| pseudopilin, cryptic, general secretion pathway [Escherichia coli
W3110]
Length = 145
Score = 31.6 bits (70), Expect = 9.2
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q G TLLE+++V+ I+GV+++ VV + KA + +++ AL +Y
Sbjct: 7 QRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHY 66
Query: 83 PAT 85
P T
Sbjct: 67 PTT 69
>ref|YP_781578.1| general secretion pathway protein G [Rhodopseudomonas palustris
BisA53]
Length = 156
Score = 31.6 bits (70), Expect = 9.2
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 25 GMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNYPA 84
G TL+E+++VL I+G++ + + A + S++ AL + +G YP
Sbjct: 25 GFTLVEMLVVLAIIGLIVGIAAPRVFNQLAGAKVRAAKVQIESLKSALDLFFLDVGRYPT 84
Query: 85 TADATAA 91
++ A
Sbjct: 85 VSEGLGA 91
>ref|YP_131308.1| hypothetical pilin PilA [Photobacterium profundum SS9]
Length = 135
Score = 31.6 bits (70), Expect = 9.2
Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLG-- 80
Q+G TL+E++IV+ I+G +SA + + + + A ++ ++ Y+ G
Sbjct: 5 QKGFTLIELMIVVAIIGALSAIAIPAYKDYVKKSELAAAVATMKALVTEAELIYQEKGAV 64
Query: 81 --NYPATADATAASKLTSGLVSLGKISSDEAKNPFNGTNMNIF-SFPRNA 127
P T T A G++S+ ++ + K N + ++ +F R+A
Sbjct: 65 VSTTPLTDLGTKADANPLGVISVSADNNLQFKFGDNSASKDLLVTFDRSA 114
>ref|YP_133276.1| hypothetical polyprotein [Photobacterium profundum SS9]
Length = 170
Score = 31.6 bits (70), Expect = 9.2
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGL--- 79
Q G+TL+ +++VL + GV+ A T A +++Q+ Q +Q A+ QT R L
Sbjct: 4 QHGLTLVNLVLVLAVAGVILA-TTTPALLRVNTQV-----QQHVELQDAVNQTLRSLHLA 57
Query: 80 --GNYPATADATAASKLTSGLVSLGKISSD 107
++ T TA + + L++L + SD
Sbjct: 58 LSEHWQQTQCRTAPTVNVNQLINLYLLPSD 87
>ref|YP_643937.1| hypothetical protein Rxyl_1159 [Rubrobacter xylanophilus DSM
9941]
Length = 487
Score = 31.6 bits (70), Expect = 9.2
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSL-----NSIQVALTQTYR 77
+ GMT+ I+V+ ++GV+ AG++ QR +++ + Q +Q+A Q YR
Sbjct: 13 ETGMTMGLTIMVMVLIGVMGAGILVFVQRDLETVVEVNRGQRALELADAGVQLARQQLYR 72
>ref|YP_294759.1| general secretion pathway protein H [Ralstonia eutropha JMP134]
Length = 161
Score = 31.6 bits (70), Expect = 9.2
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 23 QEGMTLLEVIIVLGIMGVVSAGVVTLAQRAIDSQIMTKAAQSLNSIQVALTQTYRGLGNY 82
Q+G TL+E++IV+ I+G+++A + Q + + S+ ++ A+ + +
Sbjct: 15 QKGFTLIELMIVVAIIGILAAIAIPQYQDYVTRARWSDNITSIAPLKQAIAECVQNNAQA 74
Query: 83 PATA---DATAASKLTS 96
A DATAA+ L S
Sbjct: 75 AIAAPCDDATAATGLVS 91
Database: microbial_pathogendb
Posted date: Jun 24, 2009 1:46 AM
Number of letters in database: 450,636,632
Number of sequences in database: 1,433,584
Lambda K H
0.315 0.129 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,726,773
Number of Sequences: 1433584
Number of extensions: 4617932
Number of successful extensions: 16462
Number of sequences better than 10.0: 252
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 16311
Number of HSP's gapped (non-prelim): 256
length of query: 224
length of database: 450,636,632
effective HSP length: 119
effective length of query: 105
effective length of database: 280,040,136
effective search space: 29404214280
effective search space used: 29404214280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 70 (31.6 bits)