1CT1 Enterotoxin date Jun 03, 1997
title Cholera Toxin B-Pentamer Mutant G33r Bound To Receptor Pentasaccharide
authors E.A.Merritt, W.G.J.Hol
compound source
Molecule: Cholera Toxin
Chain: D, E, F, G, H
Fragment: B-Pentamer
Engineered: Yes
Mutation: G33r
Biological_unit: Pentamer
Organism_scientific: Vibrio Cholerae
Strain: Ogawa 41 (Classical Biotype)
Expression_system: Escherichia Coli
symmetry Space Group: C 1 2 1
R_factor 0.182
crystal
cell
length a length b length c angle alpha angle beta angle gamma
103.400 67.610 101.700 90.00 131.66 90.00
method X-Ray Diffractionresolution 2.3 Å
ligand CL, GAL, GLC, NGA, SIA enzyme
similarity Belongs to the Enterotoxin_b family.
subunit The a subunit contains two chains, a1 and a2, linked by a disulfide bridge. The holotoxin (choleragen) consists of a pentameric ring of b subunits whose central pore is occupied by the a subunit.
gene ctxB (V. cholerae)
function It can bind five gm1 gangliosides. The b subunit pentameric ring directs the a subunit to its target by binding to the gm1 gangliosides present on the surface of the intestinal epithelial cells. It has no toxic activity by itself.
Primary referenceStructural studies of receptor binding by cholera toxin mutants., Merritt EA, Sarfaty S, Jobling MG, Chang T, Holmes RK, Hirst TR, Hol WG, Protein Sci 1997 Jul;6(7):1516-28. PMID:9232653
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (1ct1.pdb1.gz) 90 Kb
  • CSU: Contacts of Structural Units for 1CT1
  • Likely Quarternary Molecular Structure file(s) for 1CT1
  • Structure Factors (219 Kb)
  • Retrieve 1CT1 in mmCIF format [Save to disk]
  • View 1CT1 in 3D
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CT1, from MSDmotif at EBI
  • Genome occurence of 1CT1's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ct1d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ct1e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1ct1f_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1ct1g_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1ct1h_, region H [Jmol] [rasmolscript] [script source]
  • Fold representative 1ct1 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ct1_G] [1ct1_E] [1ct1_D] [1ct1_F] [1ct1_H]
  • Other resources with information on 1CT1
  • InterPro: IPR001835
  • PDBREPORT (protein verification by WHAT_CHECK procedures)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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