1OSP Complex (Immunoglobulin Lipoprotein) date Nov 23, 1996
title Crystal Structure Of Outer Surface Protein A Of Borrelia Burgdorferi Complexed With A Murine Monoclonal Antibody Fab
authors H.Li, C.L.Lawson
compound source
Molecule: Fab 184.1
Chain: L
Organism_scientific: Mus Musculus
Organism_common: Mouse

Molecule: Fab 184.1
Chain: H

Organism_scientific: Mus Musculus
Organism_common: Mouse

Molecule: Outer Surface Protein A
Chain: O
Synonym: Ospa
Engineered: Yes
Mutation: Yes

Organism_scientific: Borrelia Burgdorferi
Organism_common: Lyme Disease Spirochete
Strain: B31
Expression_system: Escherichia Coli
Expression_system_plasmid: Pet9c
symmetry Space Group: P 21 21 21
R_factor 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.100 91.700 100.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.95 Å
note 1OSP is a representative structure
related structures by homologous chain: 1MIE, 1Q9K
similarity Belongs to the Lipoprotein_1 family.
subcellular loc. Attached to the outer membrane by a lipid anchor.
Gene BB ; OSPA (B. burgdorferi)
Gene
Ontology
ChainFunctionProcessComponent
O

  • cell outer membrane
  • membrane
  • outer membrane
  • Primary referenceCrystal structure of Lyme disease antigen outer surface protein A complexed with an Fab., Li H, Dunn JJ, Luft BJ, Lawson CL, Proc Natl Acad Sci U S A 1997 Apr 15;94(8):3584-9. PMID:9108020
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk]
  • Biological Unit Coordinates (1osp.pdb1.gz) 146 Kb
  • CSU: Contacts of Structural Units for 1OSP
  • Likely Quarternary Molecular Structure file(s) for 1OSP
  • Retrieve 1OSP in mmCIF format [Save to disk]
  • View 1OSP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • On AstexViewer, from MSD-EBI (viewer documentation).
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  • Visual 3D analysis of 1OSP
  • Protein Explorer, Easier to use and more powerful than RasMol. (Win and Mac only)
  • Noncovalent Bond Finder displays the closest contacts to ligand or interface, reports distances, walks over water bridges.
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1OSP, from MSDmotif at EBI
  • Genome occurence of 1OSP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1osph1, region H:1-120 [Jmol] [rasmolscript] [script source]
        - Domain d1osph2, region H:121-218 [Jmol] [rasmolscript] [script source]
        - Domain d1ospl1, region L:1-107 [Jmol] [rasmolscript] [script source]
        - Domain d1ospl2, region L:108-214 [Jmol] [rasmolscript] [script source]
        - Domain d1ospo_, region O [Jmol] [rasmolscript] [script source]
  • Fold representative 1osp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1osp_O] [1osp_H] [1osp_L]
  • Other resources with information on 1OSP
  • InterPro: IPR001809
  • PDBREPORT (protein verification by WHAT_CHECK procedures)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1OSP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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