1SFR Transferase date Feb 20, 2004
title Crystal Structure Of The Mycobacterium Tuberculosis Antigen 85a Protein
authors D.R.Ronning, V.Vissa, G.S.Besra, J.T.Belisle, J.C.Sacchettini, Tb Structural Genomics Consortium (Tbsgc)
compound source
Molecule: Antigen 85-A
Chain: A, B, C
Ec: 2.3.1.-
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_common: Bacteria
Gene: Fbpa
Expression_system: Escherichia Coli
Expression_system_common: Bacteria
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet30b
symmetry Space Group: C 2 2 21
R_factor 0.222
crystal
cell
length a length b length c angle alpha angle beta angle gamma
131.430 288.662 101.289 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand
enzyme Transferase E.C.2.3.1 BRENDA
similarity Belongs to the mycobacterial a85 antigen family.[Esterase]
post-translat. modifications Contains one disulfide bridge.
subcellular loc. Membrane localization by OPM: Bacterial gram-positive acid-fast cell wall
out side
in side
function Proteins of the antigen 85 complex are responsible for the high affinity of mycobacteria to fibronectin. Possesses a mycolyltransferase activity required for the biogenesis of trehalose dimycolate (cord factor), a dominant structure necessary for maintaining cell wall integrity.
Gene
Ontology
ChainFunctionProcessComponent
A, C, B
  • acyltransferase activity
  • transferase activity


  • Primary referenceMycobacterium tuberculosis antigen 85A and 85C structures confirm binding orientation and conserved substrate specificity., Ronning DR, Vissa V, Besra GS, Belisle JT, Sacchettini JC, J Biol Chem 2004 Aug 27;279(35):36771-7. Epub 2004 Jun 10. PMID:15192106
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (152 Kb) [Save to disk]
  • Biological Unit Coordinates (1sfr.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (1sfr.pdb2.gz) 46 Kb
  • Biological Unit Coordinates (1sfr.pdb3.gz) 44 Kb
  • CSU: Contacts of Structural Units for 1SFR
  • Likely Quarternary Molecular Structure file(s) for 1SFR
  • Structure Factors (437 Kb)
  • Retrieve 1SFR in mmCIF format [Save to disk]
  • View 1SFR in 3D
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • On AstexViewer, from MSD-EBI (viewer documentation).
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  • Visual 3D analysis of 1SFR
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  • GRASS (Graphical Representation and Analysis of Structure Server)
  • Cartoon representation from PDB Cartoon
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1SFR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1sfra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1sfrb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1sfrc_, region C [Jmol] [rasmolscript] [script source]
  • Fold representative 1sfr from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1sfr_A] [1sfr_B] [1sfr_C]
  • Other resources with information on 1SFR
  • InterPro: IPR000801
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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