2PLC Hydrolase date Jul 09, 1997
title Phosphatidylinositol-Specific Phospholipase C From Listeria Monocytogenes
authors D.W.Heinz, J.Moser
compound source
Molecule: Phosphatidylinositol-Specific Phospholipase C
Chain: A
Synonym: Pi-Plc
Ec: 3.1.4.10
Engineered: Yes
Organism_scientific: Listeria Monocytogenes
Strain: Egd Serotype 1-2a
Cell_line: Bl21
Cellular_location: Secreted Into Medium
Gene: Plca
Expression_system: Escherichia Coli
Expression_system_strain: Bl21 (De3)
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Plca
Expression_system_gene: Plca Deletion Variant
symmetry Space Group: P 31 2 1
R_factor 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.500 82.500 92.200 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand
enzyme Lyase E.C.4.6.1.13 BRENDA
note 2PLC is a representative structure
related structures by homologous chain: 1AOD
similarity Contains 1 pi-plc x-box domain.[PI-PLC-X]
subunit Monomer.
catalytic activ. 1-phosphatidyl-1d-myo-inositol = 1d-myo- inositol 1,2-cyclic phosphate + diacylglycerol.
subcellular loc. Membrane localization by OPM: Secreted
out side
in side
Genes LMO0201, PIC, PLCA (L. monocytogenes)
function Important factor in pathogenesis, pi-plc activity is present only in virulent listeria species. It may participate in the lysis of the phagolysosomal membrane. Cleaves glycosylphosphatidylinositol (gpi) and phosphatidylinositol (pi) anchors but not pi phosphates.
Gene
Ontology
ChainFunctionProcessComponent
A
  • phospholipase C activity
  • signal transduction
  • intracellular signaling casc...

  • Primary referenceCrystal structure of the phosphatidylinositol-specific phospholipase C from the human pathogen Listeria monocytogenes., Moser J, Gerstel B, Meyer JE, Chakraborty T, Wehland J, Heinz DW, J Mol Biol 1997 Oct 17;273(1):269-82. PMID:9367761
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2plc.pdb1.gz) 47 Kb
  • CSU: Contacts of Structural Units for 2PLC
  • Likely Quarternary Molecular Structure file(s) for 2PLC
  • Structure Factors (598 Kb)
  • Retrieve 2PLC in mmCIF format [Save to disk]
  • View 2PLC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2PLC, from MSDmotif at EBI
  • Genome occurence of 2PLC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2plc__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 2plc from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2plc_A]
  • Other resources with information on 2PLC
  • InterPro: IPR000909
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