IMTECH
INSTITUTE OF MICROBIAL TECHNOLOGY
BIOINFORMATICS CENTER
GENEBENCH: EVALUATION OF GENE FINDERS AND DATASET CREATION SERVER
Evaluation Using New Accuracy Measures

SUBMIT PREDICTIONS FOR DATASET IN REQUIRED FORMAT:
(Order of predictions can be different from order of annotation)

  

Use Example file: 		SUBMIT ANNOTATIONS FOR DATASET IN REQUIRED FORMAT:
(Order of annotations can be different from order of prediction)

  

Use Example file:
    
SELECT METHOD FOR AVERAGING PREDICTIONS:
  •     OVER ALL DATASET SEQUENCES
  •     OVER ONLY PREDICTED SEQUENCES

Two new accuracy measures introduced recently are used for evaluation purposes here. These are the q8 (Zhang and Zhang, 2001) and q9 (Zhang and Zhang, 2002).


Perl script for converting Genscan output to genebench format
Perl script for converting HMMgene output to genebench format