Strain Card


The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
StrainM_vanbaalenii_PYR-1
DescriptionThis strain (PYR-1; DSM 7251; NRRL B-24157) is the type strain and was isolated from contaminated sites exposed to petrogenic chemicals in the watershed of Redfish Bay, Texas, in 1986.Mycobacterium vanbaalenii is a fast-growing soil mycobacterium which can degrade polycyclic aromatic hydrocarbons such as fluoranthene, pyrene, phenanthrene. This organism may be useful for bioremediation.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins5979
B cell epitopes (IEDB)21
T cell epitopes (IEDB)36
MHC binder (IEDB)95
Vaccine TargetNo