Strain Card


The is the strain card and all its information available in our database. Thhe information includes the result of experiemtnal epitope mapping and prediction from various algorithms. Experimental epitopes were mapped from IEDB repository were B cell, T cell and MHC binders. The prediction tools including B cell epitope (LBtope), MHC class I binding alleles (Propred1), MHC class II binding alleles (Propred), CTL epitope (CTLpred), HLA alleles (nHLApred), interferon-gamma inducing potential (IFNepitope), Interleukin-4 inducing capacity (IL4pred).
StrainMycobacterium_sp_JDM601
DescriptionThe strain has been sequenced for compartive genomics and it is Gram-positive, acid-fast, pleomorphic, non-motile rods characterized by distinctive cell surface mycolic acid derivatives.
CategoryNon tuberculoid Mycobacteria
Genome visualizationUsing Jbrowse, CGview, Argo applet
Number of proteins4346
B cell epitopes (IEDB)20
T cell epitopes (IEDB)46
MHC binder (IEDB)97
Vaccine TargetNo