SubMitPred: Prediction of SubMitochondrial Location of Protein

SubMitPred
Prediction of Submitochondrial Location of mitochondrial Proteins

Home

Submit

Algorithm

Supplemantary Material

Developers

Contact

SubMitPred server is used for prediction of a protein location with in the mitochondria from a given sequence. This server uses Weka software in background by using the amino acid/dipeptide/Position Specific Scoring Matrix (PSSM) information and Pfam domain search generated from the query sequence(s). The overall accuracy of this server is ~91.6%.

Job Title
This is an optional field. It can have any alphabet and numbers with "-" or "_".All other character are non-permissible.

E-mail Address
This is an optional field. Our hybrid method take some time. User can provide the Email ID to get the result in through mail however result will be printed on the screen itself after job completion.

Sequence Format
Amino acid sequences must be entered in the standard FASTA format. Sequence(s) can be pasted or can be given as a file. All the non standard characters like [*&^%$@#!()_+~=;'",<>?.\|} are ignored from the sequence.The warning is displayed if the user submit input from both sources or no sequence is submitted.

Prediction Approach
This Server is Specially design for predicting the submitochondrial location of a protein and also for inner membrane classify the type of inner membrane like single pass,multipass,matrix side inner membrane using Pfam Domain search and composition based method depending upon the used selection criteria.