Help about FADPred
FADPred server discriminate the FAD interacting residues and non-interacting residues from a given sequence. The FADPred server uses the SVM based methods having the patterns and PSSM matix of a peptides. The overall accuracy of this server is 69.65% for binary pattern and 80.82% for PSSM. This server can be useful for the study of FAD binding protein.
Name of Protein
This is an optional field. It can have any alphabet and numbers with "-" or "_".All other character are non-permissible.
This server allows the submission of sequence in any of the standard formats. The user can paste plain sequence in the provided text area.The server also has the facility for uploading the local sequence files.
This is an optional field. Our PASSM based method take some time, so here user submit his mail id and link for result send at given mail.
Amino acid sequences must be entered in the one-letter code.All the non standard characters like [*&^%$@#!()_+~=;'",<>?.\|} are ignored from the sequence.The warning is displayed if the user submit input from both sources or no sequence is submitted.
User can use only one terminus method (Binary pattern and PSSM) in SVM for their prediction at a time. Server also provides a number of options including selection of threshold for SVM and selection of the different terminals.
FADPred is a web-server specially trained for the FAD interacting residues. The prediction is based on the basis of binary pattern of 17 window motif of amino acid sequence by using support vector machines (SVM). The prediction result will be displayed on web browser, PSSM based take some so user summit their mail-id result will be send by mail.